EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000018253 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3605 bases
Position: chrgroupIV:12180120-12183724
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024127	Sua5_yciO_yrdC	PF01300.18	1.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024174	-	2550	-	ENSGACP00000024127	850 (aa)	-	G3Q2M8

Gene Model

Click here to download ENSGACG00000018253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018253	si:ch211-153b23.4	94	83.521	ENSAPOG00000006144	si:ch211-153b23.4	93	83.521	Acanthochromis_polyacanthus
ENSGACG00000018253	si:ch211-153b23.4	99	80.947	ENSAPOG00000006178	si:ch211-153b23.4	96	80.947	Acanthochromis_polyacanthus
ENSGACG00000018253	si:ch211-153b23.4	95	82.635	ENSACIG00000006997	si:ch211-153b23.4	95	82.635	Amphilophus_citrinellus
ENSGACG00000018253	si:ch211-153b23.4	78	45.238	ENSACIG00000006968	si:ch211-153b23.3	83	45.238	Amphilophus_citrinellus
ENSGACG00000018253	si:ch211-153b23.4	92	79.974	ENSAOCG00000010999	si:ch211-153b23.4	95	79.974	Amphiprion_ocellaris
ENSGACG00000018253	si:ch211-153b23.4	96	80.220	ENSAPEG00000014665	si:ch211-153b23.4	96	80.220	Amphiprion_percula
ENSGACG00000018253	si:ch211-153b23.4	99	84.542	ENSATEG00000004948	si:ch211-153b23.4	96	84.542	Anabas_testudineus
ENSGACG00000018253	si:ch211-153b23.4	96	61.463	ENSAPLG00000013596	-	99	61.463	Anas_platyrhynchos
ENSGACG00000018253	si:ch211-153b23.4	98	79.356	ENSACLG00000005471	si:ch211-153b23.4	95	79.356	Astatotilapia_calliptera
ENSGACG00000018253	si:ch211-153b23.4	54	34.801	ENSAMXG00000038564	si:ch211-153b23.3	53	34.801	Astyanax_mexicanus
ENSGACG00000018253	si:ch211-153b23.4	97	71.221	ENSAMXG00000013879	si:ch211-153b23.4	97	71.221	Astyanax_mexicanus
ENSGACG00000018253	si:ch211-153b23.4	61	33.396	ENSCSEG00000014853	si:ch211-153b23.3	59	33.396	Cynoglossus_semilaevis
ENSGACG00000018253	si:ch211-153b23.4	99	77.381	ENSCSEG00000014838	si:ch211-153b23.4	99	77.381	Cynoglossus_semilaevis
ENSGACG00000018253	si:ch211-153b23.4	95	82.324	ENSCVAG00000021145	si:ch211-153b23.4	100	82.324	Cyprinodon_variegatus
ENSGACG00000018253	si:ch211-153b23.4	99	68.831	ENSDARG00000077169	si:ch211-153b23.4	96	68.831	Danio_rerio
ENSGACG00000018253	si:ch211-153b23.4	99	69.836	ENSELUG00000004961	si:ch211-153b23.4	95	69.836	Esox_lucius
ENSGACG00000018253	si:ch211-153b23.4	96	57.734	ENSFALG00000011343	-	94	57.734	Ficedula_albicollis
ENSGACG00000018253	si:ch211-153b23.4	94	81.500	ENSFHEG00000010001	si:ch211-153b23.4	99	81.500	Fundulus_heteroclitus
ENSGACG00000018253	si:ch211-153b23.4	84	87.324	ENSFHEG00000009888	si:ch211-153b23.4	80	87.324	Fundulus_heteroclitus
ENSGACG00000018253	si:ch211-153b23.4	88	79.867	ENSGAFG00000007442	si:ch211-153b23.4	93	79.587	Gambusia_affinis
ENSGACG00000018253	si:ch211-153b23.4	82	63.037	ENSGAGG00000024601	-	93	63.037	Gopherus_agassizii
ENSGACG00000018253	si:ch211-153b23.4	60	32.514	ENSHBUG00000001760	si:ch211-153b23.3	59	32.514	Haplochromis_burtoni
ENSGACG00000018253	si:ch211-153b23.4	79	80.208	ENSHBUG00000000013	si:ch211-153b23.4	89	80.208	Haplochromis_burtoni
ENSGACG00000018253	si:ch211-153b23.4	99	69.560	ENSIPUG00000015205	si:ch211-153b23.4	99	69.560	Ictalurus_punctatus
ENSGACG00000018253	si:ch211-153b23.4	99	82.500	ENSKMAG00000006919	-	96	82.500	Kryptolebias_marmoratus
ENSGACG00000018253	si:ch211-153b23.4	96	82.945	ENSKMAG00000006829	si:ch211-153b23.4	100	82.945	Kryptolebias_marmoratus
ENSGACG00000018253	si:ch211-153b23.4	99	83.452	ENSLBEG00000026309	si:ch211-153b23.4	96	83.452	Labrus_bergylta
ENSGACG00000018253	si:ch211-153b23.4	96	65.122	ENSLACG00000017592	si:ch211-153b23.4	98	65.122	Latimeria_chalumnae
ENSGACG00000018253	si:ch211-153b23.4	96	85.363	ENSMAMG00000009277	si:ch211-153b23.4	98	85.363	Mastacembelus_armatus
ENSGACG00000018253	si:ch211-153b23.4	96	84.860	ENSMAMG00000009358	si:ch211-153b23.4	100	84.860	Mastacembelus_armatus
ENSGACG00000018253	si:ch211-153b23.4	60	31.810	ENSMAMG00000009328	si:ch211-153b23.3	58	31.810	Mastacembelus_armatus
ENSGACG00000018253	si:ch211-153b23.4	96	79.172	ENSMZEG00005011433	si:ch211-153b23.4	100	79.172	Maylandia_zebra
ENSGACG00000018253	si:ch211-153b23.4	96	61.463	ENSMGAG00000005478	-	99	61.463	Meleagris_gallopavo
ENSGACG00000018253	si:ch211-153b23.4	95	82.200	ENSMMOG00000004425	si:ch211-153b23.4	100	82.200	Mola_mola
ENSGACG00000018253	si:ch211-153b23.4	94	79.674	ENSNBRG00000013392	si:ch211-153b23.4	100	79.674	Neolamprologus_brichardi
ENSGACG00000018253	si:ch211-153b23.4	99	79.478	ENSONIG00000017875	si:ch211-153b23.4	96	79.478	Oreochromis_niloticus
ENSGACG00000018253	si:ch211-153b23.4	99	78.597	ENSORLG00000006169	si:ch211-153b23.4	96	78.597	Oryzias_latipes
ENSGACG00000018253	si:ch211-153b23.4	99	79.191	ENSORLG00020009905	si:ch211-153b23.4	96	79.191	Oryzias_latipes_hni
ENSGACG00000018253	si:ch211-153b23.4	99	79.191	ENSORLG00015003709	si:ch211-153b23.4	96	79.191	Oryzias_latipes_hsok
ENSGACG00000018253	si:ch211-153b23.4	99	79.053	ENSOMEG00000007682	si:ch211-153b23.4	96	79.053	Oryzias_melastigma
ENSGACG00000018253	si:ch211-153b23.4	59	34.893	ENSPKIG00000021029	-	59	35.448	Paramormyrops_kingsleyae
ENSGACG00000018253	si:ch211-153b23.4	98	67.626	ENSPKIG00000014429	si:ch211-153b23.4	96	67.654	Paramormyrops_kingsleyae
ENSGACG00000018253	si:ch211-153b23.4	99	68.452	ENSPKIG00000025681	si:ch211-153b23.4	98	68.452	Paramormyrops_kingsleyae
ENSGACG00000018253	si:ch211-153b23.4	94	66.165	ENSPMGG00000001313	si:ch211-153b23.4	89	66.375	Periophthalmus_magnuspinnatus
ENSGACG00000018253	si:ch211-153b23.4	80	83.333	ENSPFOG00000012164	si:ch211-153b23.4	95	83.333	Poecilia_formosa
ENSGACG00000018253	si:ch211-153b23.4	95	79.876	ENSPLAG00000016295	si:ch211-153b23.4	100	79.876	Poecilia_latipinna
ENSGACG00000018253	si:ch211-153b23.4	60	32.952	ENSPLAG00000016320	si:ch211-153b23.3	58	32.952	Poecilia_latipinna
ENSGACG00000018253	si:ch211-153b23.4	92	79.359	ENSPMEG00000007538	si:ch211-153b23.4	95	79.359	Poecilia_mexicana
ENSGACG00000018253	si:ch211-153b23.4	60	32.136	ENSPMEG00000008884	si:ch211-153b23.3	59	32.136	Poecilia_mexicana
ENSGACG00000018253	si:ch211-153b23.4	96	79.050	ENSPNYG00000000250	si:ch211-153b23.4	100	79.050	Pundamilia_nyererei
ENSGACG00000018253	si:ch211-153b23.4	60	32.514	ENSPNYG00000000251	si:ch211-153b23.3	59	32.514	Pundamilia_nyererei
ENSGACG00000018253	si:ch211-153b23.4	98	71.651	ENSPNAG00000019554	si:ch211-153b23.4	94	71.651	Pygocentrus_nattereri
ENSGACG00000018253	si:ch211-153b23.4	99	67.366	ENSSFOG00015003920	-	97	67.366	Scleropages_formosus
ENSGACG00000018253	si:ch211-153b23.4	60	33.396	ENSSFOG00015010910	si:ch211-153b23.3	60	33.396	Scleropages_formosus
ENSGACG00000018253	si:ch211-153b23.4	99	71.378	ENSSFOG00015010891	si:ch211-153b23.4	97	71.378	Scleropages_formosus
ENSGACG00000018253	si:ch211-153b23.4	58	34.563	ENSSFOG00015009030	-	82	33.832	Scleropages_formosus
ENSGACG00000018253	si:ch211-153b23.4	98	83.174	ENSSMAG00000010067	si:ch211-153b23.4	97	83.174	Scophthalmus_maximus
ENSGACG00000018253	si:ch211-153b23.4	95	85.043	ENSSDUG00000006671	si:ch211-153b23.4	100	85.043	Seriola_dumerili
ENSGACG00000018253	si:ch211-153b23.4	79	84.524	ENSSDUG00000006931	si:ch211-153b23.4	92	84.524	Seriola_dumerili
ENSGACG00000018253	si:ch211-153b23.4	86	82.979	ENSSDUG00000006842	si:ch211-153b23.4	93	82.979	Seriola_dumerili
ENSGACG00000018253	si:ch211-153b23.4	96	60.806	ENSTGUG00000005499	-	99	60.806	Taeniopygia_guttata
ENSGACG00000018253	si:ch211-153b23.4	95	79.604	ENSTRUG00000003247	si:ch211-153b23.4	100	79.604	Takifugu_rubripes
ENSGACG00000018253	si:ch211-153b23.4	60	33.966	ENSTRUG00000020530	si:ch211-153b23.3	59	33.966	Takifugu_rubripes
ENSGACG00000018253	si:ch211-153b23.4	97	77.791	ENSTNIG00000008958	si:ch211-153b23.4	99	77.791	Tetraodon_nigroviridis
ENSGACG00000018253	si:ch211-153b23.4	99	55.121	ENSXETG00000004489	-	95	55.121	Xenopus_tropicalis
ENSGACG00000018253	si:ch211-153b23.4	95	80.198	ENSXMAG00000021388	si:ch211-153b23.4	99	79.928	Xiphophorus_maculatus
ENSGACG00000018253	si:ch211-153b23.4	96	80.562	ENSXMAG00000009416	-	96	80.562	Xiphophorus_maculatus