EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018352 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4930 bases
Position: chrgroupIV:13282319-13287248
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024262	RRM_1	PF00076.22	1.6e-31	1	3
ENSGACP00000024262	RRM_1	PF00076.22	1.6e-31	2	3
ENSGACP00000024262	RRM_1	PF00076.22	1.6e-31	3	3
ENSGACP00000024266	RRM_1	PF00076.22	2.3e-31	1	3
ENSGACP00000024266	RRM_1	PF00076.22	2.3e-31	2	3
ENSGACP00000024266	RRM_1	PF00076.22	2.3e-31	3	3
ENSGACP00000024265	RRM_1	PF00076.22	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024313	-	3340	-	ENSGACP00000024265	275 (aa)	-	G3Q316
ENSGACT00000024310	-	1785	-	ENSGACP00000024262	404 (aa)	-	G3Q313
ENSGACT00000024314	-	1279	-	ENSGACP00000024266	414 (aa)	-	G3Q317

Gene Model

Click here to download ENSGACG00000018352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018352	hnrnph1	86	38.655	ENSGACG00000014447	grsf1	96	40.491
ENSGACG00000018352	hnrnph1	85	35.567	ENSGACG00000016359	esrp2	68	35.567
ENSGACG00000018352	hnrnph1	98	58.466	ENSGACG00000016118	hnrnph3	93	57.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018352	hnrnph1	99	90.534	ENSAPOG00000016614	hnrnph1	100	92.875	Acanthochromis_polyacanthus
ENSGACG00000018352	hnrnph1	99	84.878	ENSACIG00000008964	hnrnph1	100	84.337	Amphilophus_citrinellus
ENSGACG00000018352	hnrnph1	99	91.019	ENSAOCG00000008372	hnrnph1	100	93.366	Amphiprion_ocellaris
ENSGACG00000018352	hnrnph1	99	90.777	ENSAPEG00000012980	hnrnph1	100	93.120	Amphiprion_percula
ENSGACG00000018352	hnrnph1	99	90.777	ENSATEG00000002792	hnrnph1	100	93.120	Anabas_testudineus
ENSGACG00000018352	hnrnph1	96	72.304	ENSACAG00000016323	-	80	77.236	Anolis_carolinensis
ENSGACG00000018352	hnrnph1	89	88.172	ENSACLG00000003313	hnrnph1	97	89.888	Astatotilapia_calliptera
ENSGACG00000018352	hnrnph1	99	81.174	ENSAMXG00000002483	hnrnph1	100	84.108	Astyanax_mexicanus
ENSGACG00000018352	hnrnph1	100	76.923	ENSAMXG00000030703	hnrnph1l	73	84.483	Astyanax_mexicanus
ENSGACG00000018352	hnrnph1	99	87.198	ENSCSEG00000015891	hnrnph1	100	90.709	Cynoglossus_semilaevis
ENSGACG00000018352	hnrnph1	99	89.563	ENSCVAG00000014097	hnrnph1	100	90.663	Cyprinodon_variegatus
ENSGACG00000018352	hnrnph1	95	81.726	ENSDARG00000005551	hnrnph1l	85	87.209	Danio_rerio
ENSGACG00000018352	hnrnph1	94	86.968	ENSDARG00000040881	hnrnph1	96	88.953	Danio_rerio
ENSGACG00000018352	hnrnph1	99	82.979	ENSELUG00000006715	hnrnph1	99	80.052	Esox_lucius
ENSGACG00000018352	hnrnph1	96	83.069	ENSELUG00000021437	-	92	85.920	Esox_lucius
ENSGACG00000018352	hnrnph1	99	90.663	ENSFHEG00000008474	hnrnph1	100	88.206	Fundulus_heteroclitus
ENSGACG00000018352	hnrnph1	99	83.373	ENSGMOG00000006782	hnrnph1	99	82.892	Gadus_morhua
ENSGACG00000018352	hnrnph1	99	89.078	ENSGAFG00000006280	hnrnph1	100	90.663	Gambusia_affinis
ENSGACG00000018352	hnrnph1	89	88.172	ENSHBUG00000010547	hnrnph1	98	89.888	Haplochromis_burtoni
ENSGACG00000018352	hnrnph1	99	81.412	ENSHCOG00000004513	hnrnph1	100	85.273	Hippocampus_comes
ENSGACG00000018352	hnrnph1	94	81.050	ENSIPUG00000024047	hnrnph1l	82	82.609	Ictalurus_punctatus
ENSGACG00000018352	hnrnph1	100	80.000	ENSIPUG00000018262	hnrnph1	100	82.555	Ictalurus_punctatus
ENSGACG00000018352	hnrnph1	99	89.639	ENSKMAG00000018802	hnrnph1	100	90.000	Kryptolebias_marmoratus
ENSGACG00000018352	hnrnph1	99	90.291	ENSLBEG00000027811	hnrnph1	100	92.875	Labrus_bergylta
ENSGACG00000018352	hnrnph1	97	77.541	ENSLOCG00000012510	hnrnph1	84	82.105	Lepisosteus_oculatus
ENSGACG00000018352	hnrnph1	99	51.487	ENSMMUG00000017392	-	81	53.911	Macaca_mulatta
ENSGACG00000018352	hnrnph1	99	51.389	ENSMNEG00000030544	-	81	53.911	Macaca_nemestrina
ENSGACG00000018352	hnrnph1	91	86.089	ENSMAMG00000011478	hnrnph1	98	87.234	Mastacembelus_armatus
ENSGACG00000018352	hnrnph1	99	90.049	ENSMZEG00005009791	hnrnph1	100	91.400	Maylandia_zebra
ENSGACG00000018352	hnrnph1	99	86.275	ENSMMOG00000009064	hnrnph1	100	86.275	Mola_mola
ENSGACG00000018352	hnrnph1	79	49.415	ENSMODG00000002200	-	89	48.875	Monodelphis_domestica
ENSGACG00000018352	hnrnph1	95	90.278	ENSMALG00000003999	hnrnph1	99	90.278	Monopterus_albus
ENSGACG00000018352	hnrnph1	89	88.172	ENSNBRG00000015406	hnrnph1	98	89.888	Neolamprologus_brichardi
ENSGACG00000018352	hnrnph1	99	90.291	ENSONIG00000017754	hnrnph1	100	91.646	Oreochromis_niloticus
ENSGACG00000018352	hnrnph1	99	89.713	ENSORLG00000006932	hnrnph1	100	89.588	Oryzias_latipes
ENSGACG00000018352	hnrnph1	99	89.713	ENSORLG00020007881	hnrnph1	100	89.346	Oryzias_latipes_hni
ENSGACG00000018352	hnrnph1	99	89.713	ENSORLG00015005306	hnrnph1	100	89.588	Oryzias_latipes_hsok
ENSGACG00000018352	hnrnph1	99	90.799	ENSOMEG00000009827	hnrnph1	100	92.402	Oryzias_melastigma
ENSGACG00000018352	hnrnph1	99	85.158	ENSPKIG00000018203	hnrnph1l	100	83.130	Paramormyrops_kingsleyae
ENSGACG00000018352	hnrnph1	97	79.951	ENSPKIG00000009532	-	93	80.597	Paramormyrops_kingsleyae
ENSGACG00000018352	hnrnph1	99	86.650	ENSPMGG00000012151	hnrnph1	100	88.943	Periophthalmus_magnuspinnatus
ENSGACG00000018352	hnrnph1	99	89.563	ENSPFOG00000004097	hnrnph1	100	90.909	Poecilia_formosa
ENSGACG00000018352	hnrnph1	99	89.563	ENSPLAG00000011771	hnrnph1	100	90.909	Poecilia_latipinna
ENSGACG00000018352	hnrnph1	99	88.350	ENSPMEG00000019446	hnrnph1	100	90.663	Poecilia_mexicana
ENSGACG00000018352	hnrnph1	99	89.320	ENSPREG00000005780	hnrnph1	100	90.909	Poecilia_reticulata
ENSGACG00000018352	hnrnph1	99	90.049	ENSPNYG00000000204	hnrnph1	100	91.400	Pundamilia_nyererei
ENSGACG00000018352	hnrnph1	99	78.986	ENSPNAG00000002784	hnrnph1l	98	79.832	Pygocentrus_nattereri
ENSGACG00000018352	hnrnph1	99	81.418	ENSPNAG00000000439	hnrnph1	100	83.863	Pygocentrus_nattereri
ENSGACG00000018352	hnrnph1	98	86.783	ENSSFOG00015022796	hnrnph1l	100	84.428	Scleropages_formosus
ENSGACG00000018352	hnrnph1	97	81.886	ENSSFOG00015016055	-	94	85.564	Scleropages_formosus
ENSGACG00000018352	hnrnph1	96	88.161	ENSSMAG00000007820	hnrnph1	97	87.010	Scophthalmus_maximus
ENSGACG00000018352	hnrnph1	99	91.019	ENSSDUG00000008785	hnrnph1	100	93.366	Seriola_dumerili
ENSGACG00000018352	hnrnph1	99	91.019	ENSSLDG00000010685	hnrnph1	100	93.366	Seriola_lalandi_dorsalis
ENSGACG00000018352	hnrnph1	99	90.291	ENSSPAG00000009921	hnrnph1	100	92.629	Stegastes_partitus
ENSGACG00000018352	hnrnph1	99	90.099	ENSTRUG00000020069	hnrnph1	100	91.584	Takifugu_rubripes
ENSGACG00000018352	hnrnph1	96	73.775	ENSXETG00000018321	hnrnph1	83	77.285	Xenopus_tropicalis
ENSGACG00000018352	hnrnph1	98	85.122	ENSXCOG00000009133	hnrnph1	99	86.232	Xiphophorus_couchianus
ENSGACG00000018352	hnrnph1	98	84.767	ENSXMAG00000021332	hnrnph1	100	84.223	Xiphophorus_maculatus