EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018791 (Gene tree)
Gene ID: -
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 26045 bases
Position: chrgroupIV:17751587-17777631
Accession: ZDB-GENE-030131-5286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024846	RNA_pol_Rpb1_5	PF04998.17	4.8e-100	1	1
ENSGACP00000024843	RNA_pol_Rpb1_5	PF04998.17	6.8e-100	1	1
ENSGACP00000024846	RNA_pol_Rpb1_4	PF05000.17	1.4e-21	1	1
ENSGACP00000024843	RNA_pol_Rpb1_4	PF05000.17	1.4e-21	1	1
ENSGACP00000024846	RNA_pol_Rpb1_2	PF00623.20	1.8e-69	1	1
ENSGACP00000024843	RNA_pol_Rpb1_2	PF00623.20	1.9e-69	1	1
ENSGACP00000024846	RNA_pol_Rpb1_3	PF04983.18	3.2e-36	1	1
ENSGACP00000024843	RNA_pol_Rpb1_3	PF04983.18	3.3e-36	1	1
ENSGACP00000024843	RNA_pol_Rpb1_1	PF04997.12	2.1e-22	1	1
ENSGACP00000024846	RNA_pol_Rpb1_1	PF04997.12	2.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024892	-	5446	-	ENSGACP00000024843	1724 (aa)	-	G3Q4N9
ENSGACT00000024895	-	5353	-	ENSGACP00000024846	1693 (aa)	-	G3Q4P2

Gene Model

Click here to download ENSGACG00000018791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018791	polr1a	68	33.333	ENSGACG00000019366	polr2a	68	33.333
ENSGACG00000018791	polr1a	51	46.000	ENSGACG00000002304	polr3a	62	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018791	polr1a	100	64.974	ENSG00000068654	POLR1A	100	64.974	Homo_sapiens
ENSGACG00000018791	polr1a	69	82.131	ENSAPOG00000017945	polr1a	100	82.299	Acanthochromis_polyacanthus
ENSGACG00000018791	polr1a	100	65.227	ENSAMEG00000005807	POLR1A	100	69.663	Ailuropoda_melanoleuca
ENSGACG00000018791	polr1a	96	81.185	ENSACIG00000022147	polr1a	99	82.214	Amphilophus_citrinellus
ENSGACG00000018791	polr1a	100	80.417	ENSAOCG00000017336	polr1a	100	81.818	Amphiprion_ocellaris
ENSGACG00000018791	polr1a	100	80.417	ENSAPEG00000016105	polr1a	98	86.014	Amphiprion_percula
ENSGACG00000018791	polr1a	100	82.561	ENSATEG00000016773	polr1a	100	82.445	Anabas_testudineus
ENSGACG00000018791	polr1a	86	65.946	ENSAPLG00000013871	POLR1A	99	65.676	Anas_platyrhynchos
ENSGACG00000018791	polr1a	99	62.961	ENSACAG00000012141	POLR1A	99	62.579	Anolis_carolinensis
ENSGACG00000018791	polr1a	100	64.655	ENSANAG00000033927	POLR1A	100	64.655	Aotus_nancymaae
ENSGACG00000018791	polr1a	100	74.928	ENSACLG00000020541	polr1a	100	74.870	Astatotilapia_calliptera
ENSGACG00000018791	polr1a	100	64.696	ENSBTAG00000006481	POLR1A	100	64.845	Bos_taurus
ENSGACG00000018791	polr1a	99	39.053	WBGene00012999	rpoa-1	98	39.110	Caenorhabditis_elegans
ENSGACG00000018791	polr1a	100	64.130	ENSCJAG00000019547	POLR1A	100	64.455	Callithrix_jacchus
ENSGACG00000018791	polr1a	100	64.716	ENSCAFG00000007613	POLR1A	100	64.960	Canis_familiaris
ENSGACG00000018791	polr1a	100	64.642	ENSCAFG00020014752	POLR1A	95	70.053	Canis_lupus_dingo
ENSGACG00000018791	polr1a	100	64.249	ENSCHIG00000018204	POLR1A	100	63.908	Capra_hircus
ENSGACG00000018791	polr1a	100	63.792	ENSTSYG00000002761	POLR1A	100	64.142	Carlito_syrichta
ENSGACG00000018791	polr1a	97	60.918	ENSCAPG00000010132	POLR1A	100	61.507	Cavia_aperea
ENSGACG00000018791	polr1a	100	64.159	ENSCPOG00000012350	POLR1A	100	64.873	Cavia_porcellus
ENSGACG00000018791	polr1a	100	64.085	ENSCCAG00000019839	POLR1A	100	64.487	Cebus_capucinus
ENSGACG00000018791	polr1a	100	65.225	ENSCATG00000029786	POLR1A	100	65.225	Cercocebus_atys
ENSGACG00000018791	polr1a	100	63.968	ENSCLAG00000005187	POLR1A	100	64.598	Chinchilla_lanigera
ENSGACG00000018791	polr1a	100	65.110	ENSCSAG00000016251	POLR1A	100	65.110	Chlorocebus_sabaeus
ENSGACG00000018791	polr1a	50	79.899	ENSCHOG00000003766	-	84	79.899	Choloepus_hoffmanni
ENSGACG00000018791	polr1a	99	65.914	ENSCPBG00000001115	POLR1A	99	65.451	Chrysemys_picta_bellii
ENSGACG00000018791	polr1a	99	47.937	ENSCSAVG00000007184	-	99	48.746	Ciona_savignyi
ENSGACG00000018791	polr1a	100	62.478	ENSCANG00000031785	POLR1A	100	62.478	Colobus_angolensis_palliatus
ENSGACG00000018791	polr1a	100	60.035	ENSCGRG00001006651	Polr1a	100	60.035	Cricetulus_griseus_chok1gshd
ENSGACG00000018791	polr1a	60	62.139	ENSCGRG00000010834	Polr1a	100	62.235	Cricetulus_griseus_crigri
ENSGACG00000018791	polr1a	100	73.210	ENSCSEG00000020190	polr1a	100	73.152	Cynoglossus_semilaevis
ENSGACG00000018791	polr1a	100	75.898	ENSCVAG00000020941	polr1a	100	75.719	Cyprinodon_variegatus
ENSGACG00000018791	polr1a	100	70.155	ENSDARG00000098375	polr1a	100	69.695	Danio_rerio
ENSGACG00000018791	polr1a	100	61.326	ENSDNOG00000010829	POLR1A	100	61.631	Dasypus_novemcinctus
ENSGACG00000018791	polr1a	100	63.433	ENSDORG00000008298	Polr1a	100	63.375	Dipodomys_ordii
ENSGACG00000018791	polr1a	80	43.787	FBgn0019938	RpI1	99	43.017	Drosophila_melanogaster
ENSGACG00000018791	polr1a	72	84.375	ENSETEG00000000412	-	71	84.375	Echinops_telfairi
ENSGACG00000018791	polr1a	89	47.767	ENSEBUG00000005667	-	99	46.891	Eptatretus_burgeri
ENSGACG00000018791	polr1a	100	64.871	ENSEASG00005001625	POLR1A	100	64.689	Equus_asinus_asinus
ENSGACG00000018791	polr1a	100	64.928	ENSECAG00000036306	-	99	69.772	Equus_caballus
ENSGACG00000018791	polr1a	100	64.928	ENSECAG00000030510	-	99	69.772	Equus_caballus
ENSGACG00000018791	polr1a	100	64.928	ENSECAG00000010092	POLR1A	99	69.772	Equus_caballus
ENSGACG00000018791	polr1a	80	81.102	ENSEEUG00000000676	POLR1A	80	81.102	Erinaceus_europaeus
ENSGACG00000018791	polr1a	100	71.346	ENSELUG00000012769	polr1a	99	71.453	Esox_lucius
ENSGACG00000018791	polr1a	100	64.821	ENSFCAG00000008966	POLR1A	100	65.225	Felis_catus
ENSGACG00000018791	polr1a	99	64.332	ENSFALG00000010082	POLR1A	99	64.273	Ficedula_albicollis
ENSGACG00000018791	polr1a	100	64.974	ENSFDAG00000013726	POLR1A	100	65.052	Fukomys_damarensis
ENSGACG00000018791	polr1a	100	73.217	ENSFHEG00000005996	polr1a	100	72.932	Fundulus_heteroclitus
ENSGACG00000018791	polr1a	98	70.851	ENSGMOG00000002230	polr1a	99	71.347	Gadus_morhua
ENSGACG00000018791	polr1a	90	62.548	ENSGALG00000038160	-	98	62.468	Gallus_gallus
ENSGACG00000018791	polr1a	100	75.319	ENSGAFG00000015266	polr1a	100	75.289	Gambusia_affinis
ENSGACG00000018791	polr1a	89	65.589	ENSGAGG00000004984	-	95	71.338	Gopherus_agassizii
ENSGACG00000018791	polr1a	100	65.032	ENSGGOG00000001788	POLR1A	100	65.032	Gorilla_gorilla
ENSGACG00000018791	polr1a	88	80.404	ENSHBUG00000020021	polr1a	99	80.404	Haplochromis_burtoni
ENSGACG00000018791	polr1a	100	63.995	ENSHGLG00000006334	POLR1A	100	64.114	Heterocephalus_glaber_female
ENSGACG00000018791	polr1a	100	63.771	ENSHGLG00100006614	POLR1A	100	63.890	Heterocephalus_glaber_male
ENSGACG00000018791	polr1a	100	72.306	ENSHCOG00000003345	polr1a	100	71.958	Hippocampus_comes
ENSGACG00000018791	polr1a	100	70.167	ENSIPUG00000013174	polr1a	100	69.688	Ictalurus_punctatus
ENSGACG00000018791	polr1a	100	63.857	ENSSTOG00000012580	POLR1A	100	63.600	Ictidomys_tridecemlineatus
ENSGACG00000018791	polr1a	100	63.924	ENSJJAG00000013113	Polr1a	100	64.060	Jaculus_jaculus
ENSGACG00000018791	polr1a	100	79.572	ENSKMAG00000007399	polr1a	100	79.572	Kryptolebias_marmoratus
ENSGACG00000018791	polr1a	94	82.673	ENSLBEG00000015401	polr1a	99	82.667	Labrus_bergylta
ENSGACG00000018791	polr1a	53	68.939	ENSLACG00000003218	polr1a	100	68.723	Latimeria_chalumnae
ENSGACG00000018791	polr1a	100	70.375	ENSLOCG00000010881	polr1a	100	70.317	Lepisosteus_oculatus
ENSGACG00000018791	polr1a	100	65.020	ENSLAFG00000014948	POLR1A	100	64.733	Loxodonta_africana
ENSGACG00000018791	polr1a	100	64.642	ENSMFAG00000046097	POLR1A	100	65.167	Macaca_fascicularis
ENSGACG00000018791	polr1a	100	64.642	ENSMMUG00000015815	POLR1A	100	65.167	Macaca_mulatta
ENSGACG00000018791	polr1a	100	64.642	ENSMNEG00000043313	POLR1A	100	65.167	Macaca_nemestrina
ENSGACG00000018791	polr1a	100	64.879	ENSMLEG00000042428	POLR1A	100	64.879	Mandrillus_leucophaeus
ENSGACG00000018791	polr1a	100	81.265	ENSMAMG00000016565	polr1a	100	81.032	Mastacembelus_armatus
ENSGACG00000018791	polr1a	100	80.660	ENSMZEG00005004915	polr1a	100	80.544	Maylandia_zebra
ENSGACG00000018791	polr1a	99	59.966	ENSMGAG00000013111	POLR1A	99	61.768	Meleagris_gallopavo
ENSGACG00000018791	polr1a	92	63.940	ENSMAUG00000008497	Polr1a	99	63.436	Mesocricetus_auratus
ENSGACG00000018791	polr1a	100	64.360	ENSMICG00000000757	POLR1A	100	64.566	Microcebus_murinus
ENSGACG00000018791	polr1a	100	64.064	ENSMOCG00000000122	Polr1a	100	64.302	Microtus_ochrogaster
ENSGACG00000018791	polr1a	100	77.328	ENSMMOG00000010216	polr1a	100	77.154	Mola_mola
ENSGACG00000018791	polr1a	100	61.089	ENSMODG00000009335	POLR1A	100	60.726	Monodelphis_domestica
ENSGACG00000018791	polr1a	100	80.742	ENSMALG00000013363	polr1a	100	81.206	Monopterus_albus
ENSGACG00000018791	polr1a	100	63.767	MGP_CAROLIEiJ_G0028494	Polr1a	100	63.673	Mus_caroli
ENSGACG00000018791	polr1a	100	63.715	ENSMUSG00000049553	Polr1a	100	63.652	Mus_musculus
ENSGACG00000018791	polr1a	100	64.113	MGP_PahariEiJ_G0022230	Polr1a	100	64.129	Mus_pahari
ENSGACG00000018791	polr1a	100	62.443	MGP_SPRETEiJ_G0029499	Polr1a	100	63.026	Mus_spretus
ENSGACG00000018791	polr1a	100	64.487	ENSMPUG00000009135	POLR1A	100	65.052	Mustela_putorius_furo
ENSGACG00000018791	polr1a	100	65.092	ENSMLUG00000015723	POLR1A	100	65.000	Myotis_lucifugus
ENSGACG00000018791	polr1a	100	64.232	ENSNGAG00000017907	Polr1a	100	64.117	Nannospalax_galili
ENSGACG00000018791	polr1a	100	80.428	ENSNBRG00000000519	polr1a	100	80.371	Neolamprologus_brichardi
ENSGACG00000018791	polr1a	100	63.182	ENSNLEG00000002264	POLR1A	100	63.182	Nomascus_leucogenys
ENSGACG00000018791	polr1a	77	81.890	ENSMEUG00000011665	-	75	81.890	Notamacropus_eugenii
ENSGACG00000018791	polr1a	93	72.527	ENSOPRG00000008269	POLR1A	95	72.527	Ochotona_princeps
ENSGACG00000018791	polr1a	100	64.261	ENSODEG00000003542	POLR1A	100	64.706	Octodon_degus
ENSGACG00000018791	polr1a	100	80.740	ENSONIG00000015895	polr1a	100	80.393	Oreochromis_niloticus
ENSGACG00000018791	polr1a	100	64.801	ENSOCUG00000010138	POLR1A	100	64.821	Oryctolagus_cuniculus
ENSGACG00000018791	polr1a	100	77.173	ENSORLG00000008753	polr1a	99	77.173	Oryzias_latipes
ENSGACG00000018791	polr1a	100	74.493	ENSORLG00020020726	polr1a	99	74.435	Oryzias_latipes_hni
ENSGACG00000018791	polr1a	95	81.915	ENSORLG00015016071	polr1a	98	82.222	Oryzias_latipes_hsok
ENSGACG00000018791	polr1a	100	64.278	ENSOGAG00000004031	POLR1A	100	64.397	Otolemur_garnettii
ENSGACG00000018791	polr1a	100	64.396	ENSOARG00000020601	POLR1A	100	64.429	Ovis_aries
ENSGACG00000018791	polr1a	100	64.801	ENSPPAG00000042450	POLR1A	100	64.801	Pan_paniscus
ENSGACG00000018791	polr1a	100	64.773	ENSPPRG00000006702	POLR1A	100	64.971	Panthera_pardus
ENSGACG00000018791	polr1a	100	64.265	ENSPTIG00000018783	POLR1A	100	64.516	Panthera_tigris_altaica
ENSGACG00000018791	polr1a	100	64.916	ENSPTRG00000012147	POLR1A	100	64.916	Pan_troglodytes
ENSGACG00000018791	polr1a	100	65.052	ENSPANG00000025908	POLR1A	100	65.052	Papio_anubis
ENSGACG00000018791	polr1a	94	74.825	ENSPKIG00000005468	polr1a	98	74.825	Paramormyrops_kingsleyae
ENSGACG00000018791	polr1a	63	62.980	ENSPSIG00000009321	-	99	63.620	Pelodiscus_sinensis
ENSGACG00000018791	polr1a	54	77.292	ENSPMGG00000009718	polr1a	95	77.292	Periophthalmus_magnuspinnatus
ENSGACG00000018791	polr1a	100	63.788	ENSPEMG00000022224	Polr1a	100	63.710	Peromyscus_maniculatus_bairdii
ENSGACG00000018791	polr1a	95	63.718	ENSPCIG00000004222	POLR1A	99	63.598	Phascolarctos_cinereus
ENSGACG00000018791	polr1a	100	76.301	ENSPFOG00000005025	polr1a	100	76.572	Poecilia_formosa
ENSGACG00000018791	polr1a	100	76.518	ENSPLAG00000021389	polr1a	100	76.879	Poecilia_latipinna
ENSGACG00000018791	polr1a	100	73.660	ENSPMEG00000006463	polr1a	100	74.236	Poecilia_mexicana
ENSGACG00000018791	polr1a	100	76.692	ENSPREG00000002389	polr1a	100	76.599	Poecilia_reticulata
ENSGACG00000018791	polr1a	100	64.339	ENSPPYG00000012217	POLR1A	100	64.339	Pongo_abelii
ENSGACG00000018791	polr1a	87	65.070	ENSPCAG00000011582	POLR1A	91	58.518	Procavia_capensis
ENSGACG00000018791	polr1a	100	64.413	ENSPCOG00000026987	POLR1A	100	64.801	Propithecus_coquereli
ENSGACG00000018791	polr1a	95	64.254	ENSPVAG00000012674	POLR1A	95	64.528	Pteropus_vampyrus
ENSGACG00000018791	polr1a	100	80.602	ENSPNYG00000000026	polr1a	100	80.486	Pundamilia_nyererei
ENSGACG00000018791	polr1a	100	70.057	ENSPNAG00000019223	polr1a	98	72.727	Pygocentrus_nattereri
ENSGACG00000018791	polr1a	100	63.830	ENSRNOG00000009545	Polr1a	100	64.117	Rattus_norvegicus
ENSGACG00000018791	polr1a	100	64.413	ENSRBIG00000028335	POLR1A	100	64.937	Rhinopithecus_bieti
ENSGACG00000018791	polr1a	100	64.413	ENSRROG00000031473	POLR1A	100	64.937	Rhinopithecus_roxellana
ENSGACG00000018791	polr1a	99	36.074	YOR341W	RPA190	99	36.127	Saccharomyces_cerevisiae
ENSGACG00000018791	polr1a	100	64.553	ENSSBOG00000030262	POLR1A	100	64.451	Saimiri_boliviensis_boliviensis
ENSGACG00000018791	polr1a	100	59.851	ENSSHAG00000014739	POLR1A	100	59.112	Sarcophilus_harrisii
ENSGACG00000018791	polr1a	100	68.224	ENSSFOG00015019716	polr1a	100	68.336	Scleropages_formosus
ENSGACG00000018791	polr1a	100	81.333	ENSSMAG00000014342	polr1a	100	81.297	Scophthalmus_maximus
ENSGACG00000018791	polr1a	100	83.198	ENSSDUG00000014631	polr1a	100	83.140	Seriola_dumerili
ENSGACG00000018791	polr1a	100	79.930	ENSSLDG00000024095	polr1a	99	83.676	Seriola_lalandi_dorsalis
ENSGACG00000018791	polr1a	69	95.122	ENSSARG00000003136	-	70	95.122	Sorex_araneus
ENSGACG00000018791	polr1a	94	71.000	ENSSPUG00000004215	POLR1A	99	71.000	Sphenodon_punctatus
ENSGACG00000018791	polr1a	65	83.124	ENSSPAG00000016341	polr1a	99	82.633	Stegastes_partitus
ENSGACG00000018791	polr1a	83	66.318	ENSSSCG00000008226	POLR1A	99	66.294	Sus_scrofa
ENSGACG00000018791	polr1a	99	63.594	ENSTGUG00000010704	POLR1A	100	63.296	Taeniopygia_guttata
ENSGACG00000018791	polr1a	100	75.174	ENSTRUG00000002210	polr1a	99	75.231	Takifugu_rubripes
ENSGACG00000018791	polr1a	100	70.716	ENSTNIG00000010116	polr1a	100	70.836	Tetraodon_nigroviridis
ENSGACG00000018791	polr1a	70	83.628	ENSTBEG00000008646	POLR1A	70	83.628	Tupaia_belangeri
ENSGACG00000018791	polr1a	100	62.428	ENSTTRG00000008597	POLR1A	100	62.428	Tursiops_truncatus
ENSGACG00000018791	polr1a	69	64.530	ENSUAMG00000012158	-	94	65.210	Ursus_americanus
ENSGACG00000018791	polr1a	100	64.028	ENSUMAG00000006700	POLR1A	97	68.823	Ursus_maritimus
ENSGACG00000018791	polr1a	100	64.601	ENSVVUG00000001245	POLR1A	100	64.845	Vulpes_vulpes
ENSGACG00000018791	polr1a	100	61.329	ENSXETG00000001952	polr1a	99	62.875	Xenopus_tropicalis
ENSGACG00000018791	polr1a	100	77.270	ENSXMAG00000004032	polr1a	100	77.181	Xiphophorus_maculatus