EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018794 (Gene tree)
Gene ID: -
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: ovo-like zinc finger 1a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5764 bases
Position: chrgroupVII:1119943-1125706
Accession: ZDB-GENE-031010-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024844	zf-C2H2	PF00096.26	5.7e-17	1	3
ENSGACP00000024844	zf-C2H2	PF00096.26	5.7e-17	2	3
ENSGACP00000024844	zf-C2H2	PF00096.26	5.7e-17	3	3
ENSGACP00000024847	zf-C2H2	PF00096.26	8.3e-16	1	2
ENSGACP00000024847	zf-C2H2	PF00096.26	8.3e-16	2	2
ENSGACP00000024844	zf-met	PF12874.7	8.1e-07	1	2
ENSGACP00000024844	zf-met	PF12874.7	8.1e-07	2	2
ENSGACP00000024847	zf-met	PF12874.7	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024893	-	1262	-	ENSGACP00000024844	274 (aa)	-	G3Q4P0
ENSGACT00000024896	-	1172	-	ENSGACP00000024847	283 (aa)	-	G3Q4P3

Gene Model

Click here to download ENSGACG00000018794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018794	ovol1a	69	42.529	ENSGACG00000013660	-	95	42.857
ENSGACG00000018794	ovol1a	61	36.842	ENSGACG00000010393	-	78	40.260
ENSGACG00000018794	ovol1a	54	40.000	ENSGACG00000008733	znf646	56	40.476
ENSGACG00000018794	ovol1a	64	44.595	ENSGACG00000001523	-	67	43.421
ENSGACG00000018794	ovol1a	61	36.207	ENSGACG00000005239	-	77	40.385
ENSGACG00000018794	ovol1a	83	44.444	ENSGACG00000010051	-	74	44.444
ENSGACG00000018794	ovol1a	61	37.500	ENSGACG00000018088	si:dkey-7i4.5	82	37.500
ENSGACG00000018794	ovol1a	67	43.421	ENSGACG00000004549	-	95	43.678
ENSGACG00000018794	ovol1a	66	44.944	ENSGACG00000012517	-	97	45.349
ENSGACG00000018794	ovol1a	69	40.449	ENSGACG00000013652	-	99	40.698
ENSGACG00000018794	ovol1a	57	40.476	ENSGACG00000010384	-	99	39.362
ENSGACG00000018794	ovol1a	56	44.444	ENSGACG00000019550	-	93	41.558
ENSGACG00000018794	ovol1a	57	35.821	ENSGACG00000018816	-	85	40.260
ENSGACG00000018794	ovol1a	68	34.146	ENSGACG00000014395	-	92	41.250
ENSGACG00000018794	ovol1a	70	44.444	ENSGACG00000004761	-	99	44.444
ENSGACG00000018794	ovol1a	53	36.782	ENSGACG00000010147	snai1a	52	36.782
ENSGACG00000018794	ovol1a	65	39.437	ENSGACG00000001371	-	72	40.351
ENSGACG00000018794	ovol1a	52	38.235	ENSGACG00000001377	-	80	38.235
ENSGACG00000018794	ovol1a	54	36.842	ENSGACG00000013659	-	91	39.604
ENSGACG00000018794	ovol1a	63	38.596	ENSGACG00000010352	si:ch211-207i20.2	70	39.241
ENSGACG00000018794	ovol1a	61	42.254	ENSGACG00000019863	-	80	42.254
ENSGACG00000018794	ovol1a	66	43.836	ENSGACG00000004478	-	97	44.286
ENSGACG00000018794	ovol1a	54	48.889	ENSGACG00000003258	znf319b	56	42.105
ENSGACG00000018794	ovol1a	70	42.529	ENSGACG00000004765	-	96	42.529
ENSGACG00000018794	ovol1a	65	37.209	ENSGACG00000010515	ZNF628	65	41.000
ENSGACG00000018794	ovol1a	59	34.118	ENSGACG00000001166	-	100	34.118
ENSGACG00000018794	ovol1a	56	41.667	ENSGACG00000012415	GZF1	92	41.667
ENSGACG00000018794	ovol1a	51	38.235	ENSGACG00000005742	-	52	39.683
ENSGACG00000018794	ovol1a	69	42.529	ENSGACG00000001358	-	87	42.529
ENSGACG00000018794	ovol1a	62	38.667	ENSGACG00000015729	-	65	42.105
ENSGACG00000018794	ovol1a	66	42.045	ENSGACG00000005553	znf236	85	42.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018794	ovol1a	99	51.682	ENSAMXG00000011046	ovol1a	99	50.000	Astyanax_mexicanus
ENSGACG00000018794	ovol1a	98	42.612	ENSAMXG00000041879	ovol1b	88	46.063	Astyanax_mexicanus
ENSGACG00000018794	ovol1a	99	50.156	ENSDARG00000076472	ovol1a	100	50.305	Danio_rerio
ENSGACG00000018794	ovol1a	95	47.059	ENSDARG00000078256	ovol1b	86	49.593	Danio_rerio
ENSGACG00000018794	ovol1a	89	76.471	ENSELUG00000000343	ovol1a	69	76.471	Esox_lucius
ENSGACG00000018794	ovol1a	100	57.637	ENSFHEG00000002773	-	72	78.378	Fundulus_heteroclitus
ENSGACG00000018794	ovol1a	100	57.440	ENSHCOG00000015860	ovol1a	100	55.357	Hippocampus_comes
ENSGACG00000018794	ovol1a	99	80.711	ENSKMAG00000002605	-	100	56.805	Kryptolebias_marmoratus
ENSGACG00000018794	ovol1a	76	77.830	ENSMAMG00000009768	ovol1a	72	78.378	Mastacembelus_armatus
ENSGACG00000018794	ovol1a	88	78.673	ENSMALG00000008421	ovol1a	70	78.378	Monopterus_albus
ENSGACG00000018794	ovol1a	100	53.872	ENSPKIG00000024718	ovol1a	100	52.862	Paramormyrops_kingsleyae
ENSGACG00000018794	ovol1a	89	83.333	ENSPFOG00000008841	-	100	68.214	Poecilia_formosa
ENSGACG00000018794	ovol1a	100	52.615	ENSPNAG00000020630	ovol1a	100	51.077	Pygocentrus_nattereri
ENSGACG00000018794	ovol1a	86	49.421	ENSPNAG00000016198	ovol1b	94	49.804	Pygocentrus_nattereri
ENSGACG00000018794	ovol1a	100	73.094	ENSSDUG00000009846	ovol1a	81	73.478	Seriola_dumerili