EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000018811 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 752 bases
Position: chrgroupIV:17931354-17932105
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024868	MRP-S32	PF10210.9	3.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024917	-	291	-	ENSGACP00000024868	97 (aa)	-	G3Q4R4

Gene Model

Click here to download ENSGACG00000018811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018811	mrpl42	97	84.043	ENSAPOG00000010677	mrpl42	65	84.043	Acanthochromis_polyacanthus
ENSGACG00000018811	mrpl42	100	85.567	ENSAOCG00000011620	mrpl42	68	85.567	Amphiprion_ocellaris
ENSGACG00000018811	mrpl42	100	85.567	ENSAPEG00000019516	mrpl42	68	85.567	Amphiprion_percula
ENSGACG00000018811	mrpl42	86	89.157	ENSATEG00000014106	mrpl42	63	89.157	Anabas_testudineus
ENSGACG00000018811	mrpl42	99	70.833	ENSACAG00000012606	MRPL42	66	70.833	Anolis_carolinensis
ENSGACG00000018811	mrpl42	100	80.412	ENSACLG00000026856	mrpl42	67	80.412	Astatotilapia_calliptera
ENSGACG00000018811	mrpl42	99	58.333	ENSAMXG00000035149	mrpl42	70	58.333	Astyanax_mexicanus
ENSGACG00000018811	mrpl42	98	72.632	ENSCSEG00000010067	mrpl42	67	72.632	Cynoglossus_semilaevis
ENSGACG00000018811	mrpl42	99	81.250	ENSCVAG00000002612	mrpl42	66	81.250	Cyprinodon_variegatus
ENSGACG00000018811	mrpl42	100	74.227	ENSDARG00000079391	mrpl42	67	74.227	Danio_rerio
ENSGACG00000018811	mrpl42	99	48.039	ENSEBUG00000005581	mrpl42	76	48.039	Eptatretus_burgeri
ENSGACG00000018811	mrpl42	99	82.292	ENSELUG00000001973	mrpl42	67	82.292	Esox_lucius
ENSGACG00000018811	mrpl42	98	82.105	ENSFHEG00000018696	mrpl42	66	82.105	Fundulus_heteroclitus
ENSGACG00000018811	mrpl42	99	79.167	ENSGMOG00000002972	mrpl42	99	79.167	Gadus_morhua
ENSGACG00000018811	mrpl42	99	84.375	ENSGAFG00000018373	mrpl42	69	84.375	Gambusia_affinis
ENSGACG00000018811	mrpl42	100	80.412	ENSHBUG00000015960	mrpl42	67	80.412	Haplochromis_burtoni
ENSGACG00000018811	mrpl42	100	77.320	ENSHCOG00000014046	mrpl42	67	77.320	Hippocampus_comes
ENSGACG00000018811	mrpl42	100	58.763	ENSIPUG00000015395	mrpl42	66	58.763	Ictalurus_punctatus
ENSGACG00000018811	mrpl42	99	80.208	ENSKMAG00000013671	mrpl42	67	80.208	Kryptolebias_marmoratus
ENSGACG00000018811	mrpl42	100	82.474	ENSLBEG00000028618	mrpl42	66	82.474	Labrus_bergylta
ENSGACG00000018811	mrpl42	74	73.611	ENSLOCG00000015284	mrpl42	57	73.611	Lepisosteus_oculatus
ENSGACG00000018811	mrpl42	100	84.536	ENSMAMG00000009737	mrpl42	70	84.536	Mastacembelus_armatus
ENSGACG00000018811	mrpl42	100	80.412	ENSMZEG00005008545	mrpl42	64	80.412	Maylandia_zebra
ENSGACG00000018811	mrpl42	86	83.133	ENSMMOG00000002317	mrpl42	55	83.133	Mola_mola
ENSGACG00000018811	mrpl42	100	81.443	ENSMALG00000015794	mrpl42	60	81.443	Monopterus_albus
ENSGACG00000018811	mrpl42	100	80.412	ENSNBRG00000003307	mrpl42	67	80.412	Neolamprologus_brichardi
ENSGACG00000018811	mrpl42	100	80.412	ENSONIG00000011753	mrpl42	67	80.412	Oreochromis_niloticus
ENSGACG00000018811	mrpl42	99	64.583	ENSOANG00000019984	-	65	64.583	Ornithorhynchus_anatinus
ENSGACG00000018811	mrpl42	99	81.250	ENSORLG00000013500	mrpl42	56	81.250	Oryzias_latipes
ENSGACG00000018811	mrpl42	99	81.250	ENSORLG00020000548	mrpl42	66	81.250	Oryzias_latipes_hni
ENSGACG00000018811	mrpl42	99	82.292	ENSORLG00015016984	mrpl42	66	82.292	Oryzias_latipes_hsok
ENSGACG00000018811	mrpl42	100	82.474	ENSOMEG00000010700	mrpl42	67	82.474	Oryzias_melastigma
ENSGACG00000018811	mrpl42	99	76.042	ENSPKIG00000025457	mrpl42	66	76.042	Paramormyrops_kingsleyae
ENSGACG00000018811	mrpl42	96	76.344	ENSPMGG00000019705	mrpl42	66	76.344	Periophthalmus_magnuspinnatus
ENSGACG00000018811	mrpl42	99	60.606	ENSPMAG00000008091	mrpl42	64	60.606	Petromyzon_marinus
ENSGACG00000018811	mrpl42	99	82.292	ENSPFOG00000016539	mrpl42	65	82.292	Poecilia_formosa
ENSGACG00000018811	mrpl42	99	83.333	ENSPLAG00000001255	mrpl42	66	83.333	Poecilia_latipinna
ENSGACG00000018811	mrpl42	99	82.292	ENSPMEG00000016462	mrpl42	66	82.292	Poecilia_mexicana
ENSGACG00000018811	mrpl42	99	75.000	ENSPREG00000012053	mrpl42	70	75.000	Poecilia_reticulata
ENSGACG00000018811	mrpl42	100	80.412	ENSPNYG00000009586	mrpl42	67	80.412	Pundamilia_nyererei
ENSGACG00000018811	mrpl42	100	61.856	ENSPNAG00000020753	mrpl42	67	61.856	Pygocentrus_nattereri
ENSGACG00000018811	mrpl42	100	83.505	ENSSMAG00000000262	mrpl42	67	83.505	Scophthalmus_maximus
ENSGACG00000018811	mrpl42	100	84.536	ENSSDUG00000005949	mrpl42	67	84.536	Seriola_dumerili
ENSGACG00000018811	mrpl42	100	84.536	ENSSLDG00000010159	mrpl42	67	84.536	Seriola_lalandi_dorsalis
ENSGACG00000018811	mrpl42	100	82.474	ENSTRUG00000025949	mrpl42	66	82.474	Takifugu_rubripes
ENSGACG00000018811	mrpl42	99	61.458	ENSXETG00000032902	mrpl42	77	61.458	Xenopus_tropicalis
ENSGACG00000018811	mrpl42	99	83.333	ENSXCOG00000013875	mrpl42	74	83.333	Xiphophorus_couchianus