EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018847 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3159 bases
Position: chrgroupIV:18533194-18536352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024922	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024971	-	678	-	ENSGACP00000024922	225 (aa)	-	G3Q4W8

Gene Model

Click here to download ENSGACG00000018847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018847	-	51	34.783	ENSGACG00000012474	rabl2	52	34.783
ENSGACG00000018847	-	75	45.665	ENSGACG00000020437	-	81	45.665
ENSGACG00000018847	-	71	30.539	ENSGACG00000007818	si:ch73-116o1.2	80	30.539
ENSGACG00000018847	-	92	38.462	ENSGACG00000004997	rab5aa	89	38.462
ENSGACG00000018847	-	72	38.889	ENSGACG00000013611	-	79	38.889
ENSGACG00000018847	-	72	39.506	ENSGACG00000020356	rab6a	77	39.506
ENSGACG00000018847	-	76	43.605	ENSGACG00000016164	rab4a	79	43.605
ENSGACG00000018847	-	72	39.506	ENSGACG00000017153	rab41	76	39.506
ENSGACG00000018847	-	72	43.827	ENSGACG00000008659	rab5c	73	43.827
ENSGACG00000018847	-	72	37.870	ENSGACG00000003726	rab6ba	78	37.870
ENSGACG00000018847	-	80	33.505	ENSGACG00000014578	RAB9A	97	33.505
ENSGACG00000018847	-	74	34.706	ENSGACG00000018291	rab9b	83	34.706
ENSGACG00000018847	-	94	36.019	ENSGACG00000019767	-	95	36.019
ENSGACG00000018847	-	74	33.929	ENSGACG00000016680	rheb	90	33.929
ENSGACG00000018847	-	55	35.714	ENSGACG00000011340	hrasb	85	31.288
ENSGACG00000018847	-	79	32.597	ENSGACG00000020514	rab34b	70	32.597
ENSGACG00000018847	-	74	38.235	ENSGACG00000009647	RAB7A	82	38.235
ENSGACG00000018847	-	72	43.210	ENSGACG00000006162	-	73	43.210
ENSGACG00000018847	-	75	44.970	ENSGACG00000013297	-	76	44.970
ENSGACG00000018847	-	79	46.328	ENSGACG00000014915	si:dkey-16l2.16	80	46.328
ENSGACG00000018847	-	96	44.545	ENSGACG00000013401	zgc:171927	98	44.545
ENSGACG00000018847	-	87	35.678	ENSGACG00000000807	-	88	35.678
ENSGACG00000018847	-	96	43.256	ENSGACG00000003864	rab1ab	99	43.256
ENSGACG00000018847	-	96	43.256	ENSGACG00000013249	rab25b	96	43.256
ENSGACG00000018847	-	88	45.226	ENSGACG00000000789	rab1ba	94	45.226
ENSGACG00000018847	-	75	34.682	ENSGACG00000019134	si:cabz01085950.1	84	34.682
ENSGACG00000018847	-	71	38.272	ENSGACG00000005397	si:ch211-247i17.1	92	38.272
ENSGACG00000018847	-	94	41.981	ENSGACG00000013548	rab35b	98	41.981
ENSGACG00000018847	-	78	45.902	ENSGACG00000018745	rab33a	78	45.902
ENSGACG00000018847	-	66	32.000	ENSGACG00000011661	kras	94	30.688
ENSGACG00000018847	-	93	31.455	ENSGACG00000003972	rab9a	96	31.455
ENSGACG00000018847	-	83	49.206	ENSGACG00000011925	rab13	97	47.000
ENSGACG00000018847	-	86	39.896	ENSGACG00000016639	rab12	78	39.896
ENSGACG00000018847	-	76	45.763	ENSGACG00000004965	rab25a	83	45.763
ENSGACG00000018847	-	70	34.783	ENSGACG00000014678	rab36	61	34.783
ENSGACG00000018847	-	76	33.140	ENSGACG00000006151	rab23	72	33.333
ENSGACG00000018847	-	74	34.302	ENSGACG00000010473	RAB29	83	34.302
ENSGACG00000018847	-	75	39.053	ENSGACG00000013721	rab6bb	81	39.053
ENSGACG00000018847	-	80	44.865	ENSGACG00000001725	zgc:101559	79	44.865
ENSGACG00000018847	-	75	42.604	ENSGACG00000016395	rab18b	81	42.604
ENSGACG00000018847	-	76	44.118	ENSGACG00000007722	rab15	92	44.805
ENSGACG00000018847	-	80	32.778	ENSGACG00000000729	rhebl1	93	32.778
ENSGACG00000018847	-	92	32.075	ENSGACG00000011190	rab34a	77	32.075
ENSGACG00000018847	-	72	39.634	ENSGACG00000005608	rab22a	83	39.634
ENSGACG00000018847	-	75	42.604	ENSGACG00000001694	rab18a	80	42.604
ENSGACG00000018847	-	80	31.892	ENSGACG00000011607	rab32b	83	31.892
ENSGACG00000018847	-	75	54.438	ENSGACG00000012006	rab30	84	54.438
ENSGACG00000018847	-	72	49.068	ENSGACG00000013259	rab11al	74	49.068
ENSGACG00000018847	-	93	45.070	ENSGACG00000019642	-	100	45.070
ENSGACG00000018847	-	75	46.746	ENSGACG00000015479	rab11bb	77	46.746
ENSGACG00000018847	-	75	44.767	ENSGACG00000019540	rab33ba	78	44.767
ENSGACG00000018847	-	74	46.108	ENSGACG00000016799	-	97	46.108
ENSGACG00000018847	-	75	44.828	ENSGACG00000001950	RAB39B	80	44.828
ENSGACG00000018847	-	76	45.882	ENSGACG00000014905	rab2a	79	45.882
ENSGACG00000018847	-	81	41.758	ENSGACG00000005979	RAB15	86	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018847	-	72	85.714	ENSAOCG00000015948	-	77	85.714	Amphiprion_ocellaris
ENSGACG00000018847	-	99	79.821	ENSATEG00000012781	-	100	79.821	Anabas_testudineus
ENSGACG00000018847	-	99	79.911	ENSACLG00000000860	-	100	79.911	Astatotilapia_calliptera
ENSGACG00000018847	-	99	73.543	ENSAMXG00000039737	RAB19	99	73.543	Astyanax_mexicanus
ENSGACG00000018847	-	95	61.215	ENSCPBG00000011914	RAB19	94	61.215	Chrysemys_picta_bellii
ENSGACG00000018847	-	99	83.408	ENSCSEG00000010402	-	100	83.408	Cynoglossus_semilaevis
ENSGACG00000018847	-	100	60.444	ENSFALG00000003709	RAB19	99	60.444	Ficedula_albicollis
ENSGACG00000018847	-	88	64.975	ENSGAGG00000013139	RAB19	87	64.975	Gopherus_agassizii
ENSGACG00000018847	-	99	64.414	ENSIPUG00000012509	-	99	64.414	Ictalurus_punctatus
ENSGACG00000018847	-	99	60.090	ENSIPUG00000016261	RAB19	98	60.090	Ictalurus_punctatus
ENSGACG00000018847	-	99	82.063	ENSKMAG00000012657	-	100	82.063	Kryptolebias_marmoratus
ENSGACG00000018847	-	82	83.784	ENSMZEG00005010813	-	89	83.784	Maylandia_zebra
ENSGACG00000018847	-	96	80.184	ENSONIG00000016851	-	100	80.184	Oreochromis_niloticus
ENSGACG00000018847	-	96	76.852	ENSPMGG00000007381	-	97	76.852	Periophthalmus_magnuspinnatus
ENSGACG00000018847	-	96	68.203	ENSPMGG00000009466	RAB19	96	68.203	Periophthalmus_magnuspinnatus
ENSGACG00000018847	-	98	80.543	ENSPNYG00000008498	-	98	80.543	Pundamilia_nyererei
ENSGACG00000018847	-	100	78.761	ENSTNIG00000018498	-	100	78.761	Tetraodon_nigroviridis
ENSGACG00000018847	-	91	73.171	ENSTNIG00000006650	RAB19	94	73.171	Tetraodon_nigroviridis