EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10218 bases
Position: chrgroupIV:19658413-19668630
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025027	MMR_HSR1	PF01926.23	5.3e-06	1	1
ENSGACP00000025030	MMR_HSR1	PF01926.23	5.4e-06	1	1
ENSGACP00000025033	MMR_HSR1	PF01926.23	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025079	-	2634	-	ENSGACP00000025030	708 (aa)	-	G3Q574
ENSGACT00000025082	-	2188	-	ENSGACP00000025033	701 (aa)	-	G3Q577
ENSGACT00000025076	-	2594	-	ENSGACP00000025027	681 (aa)	-	G3Q571

Gene Model

Click here to download ENSGACG00000018930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018930	-	100	84.488	ENSGACG00000004145	dnm1l	100	84.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018930	-	100	85.837	ENSG00000087470	DNM1L	100	86.286	Homo_sapiens
ENSGACG00000018930	-	100	95.335	ENSAPOG00000022905	-	100	95.335	Acanthochromis_polyacanthus
ENSGACG00000018930	-	100	86.809	ENSAPOG00000016682	dnm1l	100	86.809	Acanthochromis_polyacanthus
ENSGACG00000018930	-	100	94.752	ENSACIG00000010115	-	100	94.752	Amphilophus_citrinellus
ENSGACG00000018930	-	100	88.092	ENSACIG00000002828	dnm1l	100	88.092	Amphilophus_citrinellus
ENSGACG00000018930	-	100	95.190	ENSAOCG00000005974	-	100	95.190	Amphiprion_ocellaris
ENSGACG00000018930	-	100	88.058	ENSAOCG00000010262	dnm1l	100	88.058	Amphiprion_ocellaris
ENSGACG00000018930	-	100	86.667	ENSAPEG00000005223	dnm1l	100	86.667	Amphiprion_percula
ENSGACG00000018930	-	100	96.035	ENSAPEG00000015504	-	100	96.035	Amphiprion_percula
ENSGACG00000018930	-	100	95.742	ENSATEG00000010274	-	100	95.742	Anabas_testudineus
ENSGACG00000018930	-	100	87.518	ENSATEG00000018248	dnm1l	100	87.518	Anabas_testudineus
ENSGACG00000018930	-	100	84.366	ENSANAG00000030575	DNM1L	100	84.930	Aotus_nancymaae
ENSGACG00000018930	-	100	95.301	ENSACLG00000003008	-	100	95.301	Astatotilapia_calliptera
ENSGACG00000018930	-	100	85.007	ENSACLG00000001401	dnm1l	100	85.007	Astatotilapia_calliptera
ENSGACG00000018930	-	100	88.494	ENSAMXG00000001473	dnm1l	100	88.494	Astyanax_mexicanus
ENSGACG00000018930	-	100	80.544	ENSBTAG00000011395	DNM1L	100	80.544	Bos_taurus
ENSGACG00000018930	-	100	80.272	ENSCHIG00000024000	DNM1L	100	80.272	Capra_hircus
ENSGACG00000018930	-	100	84.366	ENSCCAG00000031176	DNM1L	100	85.070	Cebus_capucinus
ENSGACG00000018930	-	100	84.366	ENSCATG00000016013	DNM1L	100	84.930	Cercocebus_atys
ENSGACG00000018930	-	100	85.980	ENSCANG00000040112	DNM1L	100	86.429	Colobus_angolensis_palliatus
ENSGACG00000018930	-	100	94.420	ENSCSEG00000011310	DNM1L	100	94.420	Cynoglossus_semilaevis
ENSGACG00000018930	-	97	82.982	ENSCSEG00000014488	dnm1l	95	88.679	Cynoglossus_semilaevis
ENSGACG00000018930	-	100	95.154	ENSCVAG00000011641	-	100	95.154	Cyprinodon_variegatus
ENSGACG00000018930	-	100	85.468	ENSCVAG00000021070	dnm1l	100	86.043	Cyprinodon_variegatus
ENSGACG00000018930	-	100	89.740	ENSDARG00000015006	dnm1l	100	89.740	Danio_rerio
ENSGACG00000018930	-	100	92.690	ENSELUG00000015446	DNM1L	100	92.690	Esox_lucius
ENSGACG00000018930	-	100	88.017	ENSELUG00000009177	dnm1l	100	88.730	Esox_lucius
ENSGACG00000018930	-	100	94.420	ENSFHEG00000009442	-	100	94.420	Fundulus_heteroclitus
ENSGACG00000018930	-	100	84.100	ENSGMOG00000001033	dnm1l	99	84.100	Gadus_morhua
ENSGACG00000018930	-	97	89.001	ENSGMOG00000001805	-	100	89.001	Gadus_morhua
ENSGACG00000018930	-	100	85.366	ENSGAFG00000000857	dnm1l	100	85.940	Gambusia_affinis
ENSGACG00000018930	-	100	93.704	ENSGAFG00000017056	-	100	93.704	Gambusia_affinis
ENSGACG00000018930	-	100	84.366	ENSGGOG00000006636	DNM1L	100	84.930	Gorilla_gorilla
ENSGACG00000018930	-	100	85.007	ENSHBUG00000001952	dnm1l	100	85.007	Haplochromis_burtoni
ENSGACG00000018930	-	100	87.812	ENSHBUG00000004929	-	100	87.812	Haplochromis_burtoni
ENSGACG00000018930	-	98	89.021	ENSIPUG00000006021	dnm1l	97	89.021	Ictalurus_punctatus
ENSGACG00000018930	-	100	83.894	ENSKMAG00000004994	dnm1l	100	83.894	Kryptolebias_marmoratus
ENSGACG00000018930	-	100	92.948	ENSKMAG00000021767	-	100	92.948	Kryptolebias_marmoratus
ENSGACG00000018930	-	100	89.721	ENSLBEG00000028335	-	96	96.154	Labrus_bergylta
ENSGACG00000018930	-	100	85.532	ENSLBEG00000008434	dnm1l	100	85.532	Labrus_bergylta
ENSGACG00000018930	-	100	85.100	ENSLACG00000009823	DNM1L	98	81.564	Latimeria_chalumnae
ENSGACG00000018930	-	100	87.446	ENSLOCG00000000949	dnm1l	100	87.446	Lepisosteus_oculatus
ENSGACG00000018930	-	100	85.837	ENSMFAG00000006058	DNM1L	100	86.286	Macaca_fascicularis
ENSGACG00000018930	-	100	85.837	ENSMMUG00000013655	DNM1L	100	86.286	Macaca_mulatta
ENSGACG00000018930	-	100	84.366	ENSMNEG00000037323	DNM1L	100	84.930	Macaca_nemestrina
ENSGACG00000018930	-	100	86.421	ENSMAMG00000023186	dnm1l	100	86.421	Mastacembelus_armatus
ENSGACG00000018930	-	100	95.007	ENSMAMG00000006659	-	100	95.007	Mastacembelus_armatus
ENSGACG00000018930	-	100	85.940	ENSMZEG00005007753	dnm1l	100	85.940	Maylandia_zebra
ENSGACG00000018930	-	100	81.612	ENSMMOG00000014588	dnm1l	100	81.612	Mola_mola
ENSGACG00000018930	-	100	91.026	ENSMMOG00000002489	-	100	91.026	Mola_mola
ENSGACG00000018930	-	100	82.473	ENSMODG00000012763	DNM1L	100	82.904	Monodelphis_domestica
ENSGACG00000018930	-	100	85.384	ENSMALG00000011851	dnm1l	100	85.384	Monopterus_albus
ENSGACG00000018930	-	100	91.679	ENSMALG00000003988	-	100	91.679	Monopterus_albus
ENSGACG00000018930	-	100	90.000	ENSNBRG00000000347	-	100	90.000	Neolamprologus_brichardi
ENSGACG00000018930	-	100	85.653	ENSNBRG00000020969	dnm1l	100	85.653	Neolamprologus_brichardi
ENSGACG00000018930	-	100	91.873	ENSONIG00000016752	-	98	91.873	Oreochromis_niloticus
ENSGACG00000018930	-	100	84.072	ENSONIG00000008672	dnm1l	100	84.072	Oreochromis_niloticus
ENSGACG00000018930	-	100	94.567	ENSORLG00000010705	-	100	94.567	Oryzias_latipes
ENSGACG00000018930	-	100	85.673	ENSORLG00000003624	dnm1l	100	85.673	Oryzias_latipes
ENSGACG00000018930	-	100	89.280	ENSORLG00020002127	-	100	89.280	Oryzias_latipes_hni
ENSGACG00000018930	-	100	85.817	ENSORLG00020016524	dnm1l	100	85.817	Oryzias_latipes_hni
ENSGACG00000018930	-	100	93.503	ENSORLG00015001039	-	100	93.503	Oryzias_latipes_hsok
ENSGACG00000018930	-	100	85.960	ENSORLG00015009298	dnm1l	100	85.960	Oryzias_latipes_hsok
ENSGACG00000018930	-	100	94.428	ENSOMEG00000013872	-	100	94.428	Oryzias_melastigma
ENSGACG00000018930	-	100	85.431	ENSOMEG00000010635	dnm1l	100	85.431	Oryzias_melastigma
ENSGACG00000018930	-	100	84.366	ENSPPAG00000039981	DNM1L	100	84.930	Pan_paniscus
ENSGACG00000018930	-	100	84.366	ENSPTRG00000004817	DNM1L	100	84.930	Pan_troglodytes
ENSGACG00000018930	-	100	76.686	ENSPKIG00000010643	dnm1l	89	92.857	Paramormyrops_kingsleyae
ENSGACG00000018930	-	100	86.801	ENSPKIG00000001634	dnm1l	100	86.801	Paramormyrops_kingsleyae
ENSGACG00000018930	-	100	83.895	ENSPMGG00000005630	dnm1l	100	83.895	Periophthalmus_magnuspinnatus
ENSGACG00000018930	-	71	93.496	ENSPMGG00000019068	-	81	93.496	Periophthalmus_magnuspinnatus
ENSGACG00000018930	-	100	78.905	ENSPCIG00000015246	DNM1L	100	78.905	Phascolarctos_cinereus
ENSGACG00000018930	-	100	94.567	ENSPFOG00000012922	-	100	94.567	Poecilia_formosa
ENSGACG00000018930	-	100	83.609	ENSPFOG00000002801	dnm1l	100	84.116	Poecilia_formosa
ENSGACG00000018930	-	100	85.940	ENSPLAG00000001690	dnm1l	100	86.514	Poecilia_latipinna
ENSGACG00000018930	-	100	94.714	ENSPLAG00000012587	DNM1L	100	94.714	Poecilia_latipinna
ENSGACG00000018930	-	100	85.796	ENSPMEG00000006603	dnm1l	100	86.370	Poecilia_mexicana
ENSGACG00000018930	-	100	94.860	ENSPMEG00000021909	-	100	94.860	Poecilia_mexicana
ENSGACG00000018930	-	100	92.658	ENSPREG00000009857	-	100	92.658	Poecilia_reticulata
ENSGACG00000018930	-	100	85.673	ENSPREG00000008602	dnm1l	100	86.246	Poecilia_reticulata
ENSGACG00000018930	-	100	95.301	ENSPNYG00000006979	-	100	95.301	Pundamilia_nyererei
ENSGACG00000018930	-	100	87.761	ENSPNAG00000020017	dnm1l	100	87.761	Pygocentrus_nattereri
ENSGACG00000018930	-	100	84.366	ENSRBIG00000035947	DNM1L	100	84.930	Rhinopithecus_bieti
ENSGACG00000018930	-	100	85.837	ENSRROG00000042126	DNM1L	100	86.286	Rhinopithecus_roxellana
ENSGACG00000018930	-	100	84.930	ENSSBOG00000026857	DNM1L	100	84.930	Saimiri_boliviensis_boliviensis
ENSGACG00000018930	-	100	88.150	ENSSFOG00015004634	dnm1l	100	88.150	Scleropages_formosus
ENSGACG00000018930	-	100	84.515	ENSSFOG00015001002	-	100	84.515	Scleropages_formosus
ENSGACG00000018930	-	100	84.866	ENSSMAG00000008336	dnm1l	100	84.866	Scophthalmus_maximus
ENSGACG00000018930	-	100	96.769	ENSSMAG00000019922	-	100	96.769	Scophthalmus_maximus
ENSGACG00000018930	-	100	96.476	ENSSDUG00000008937	-	100	96.476	Seriola_dumerili
ENSGACG00000018930	-	100	88.218	ENSSDUG00000022859	dnm1l	100	88.218	Seriola_dumerili
ENSGACG00000018930	-	100	85.920	ENSSLDG00000014797	DNM1L	100	85.920	Seriola_lalandi_dorsalis
ENSGACG00000018930	-	100	96.623	ENSSLDG00000006832	-	100	96.623	Seriola_lalandi_dorsalis
ENSGACG00000018930	-	100	86.103	ENSSPAG00000012049	dnm1l	100	85.960	Stegastes_partitus
ENSGACG00000018930	-	100	96.035	ENSSPAG00000015832	-	100	96.035	Stegastes_partitus
ENSGACG00000018930	-	100	86.963	ENSTRUG00000016834	dnm1l	100	86.963	Takifugu_rubripes
ENSGACG00000018930	-	100	89.868	ENSTNIG00000018526	-	100	89.868	Tetraodon_nigroviridis
ENSGACG00000018930	-	89	86.880	ENSXETG00000012252	dnm1l	100	86.880	Xenopus_tropicalis
ENSGACG00000018930	-	100	94.714	ENSXMAG00000011022	-	100	94.714	Xiphophorus_maculatus
ENSGACG00000018930	-	100	84.583	ENSXMAG00000017047	dnm1l	100	84.583	Xiphophorus_maculatus