EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000018936 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3117 bases
Position: chrgroupIX:14901539-14904655
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025035	EXOSC1	PF10447.9	7.6e-15	1	1
ENSGACP00000025035	ECR1_N	PF14382.6	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025084	-	1223	-	ENSGACP00000025035	194 (aa)	-	G3Q579

Gene Model

Click here to download ENSGACG00000018936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018936	exosc1	98	80.105	ENSG00000171311	EXOSC1	98	80.105	Homo_sapiens
ENSGACG00000018936	exosc1	100	93.814	ENSAPOG00000007822	exosc1	100	93.814	Acanthochromis_polyacanthus
ENSGACG00000018936	exosc1	98	80.628	ENSAMEG00000000129	EXOSC1	98	80.628	Ailuropoda_melanoleuca
ENSGACG00000018936	exosc1	95	92.973	ENSACIG00000018956	exosc1	91	92.973	Amphilophus_citrinellus
ENSGACG00000018936	exosc1	100	94.330	ENSAOCG00000010699	exosc1	100	94.330	Amphiprion_ocellaris
ENSGACG00000018936	exosc1	93	83.333	ENSAPEG00000012690	exosc1	97	83.333	Amphiprion_percula
ENSGACG00000018936	exosc1	100	93.814	ENSATEG00000018683	exosc1	100	93.814	Anabas_testudineus
ENSGACG00000018936	exosc1	96	77.005	ENSACAG00000002101	EXOSC1	96	77.005	Anolis_carolinensis
ENSGACG00000018936	exosc1	98	80.105	ENSANAG00000034669	EXOSC1	98	80.105	Aotus_nancymaae
ENSGACG00000018936	exosc1	100	93.814	ENSACLG00000021243	exosc1	100	93.814	Astatotilapia_calliptera
ENSGACG00000018936	exosc1	100	91.237	ENSAMXG00000011116	exosc1	100	91.237	Astyanax_mexicanus
ENSGACG00000018936	exosc1	98	80.628	ENSBTAG00000012699	EXOSC1	98	80.628	Bos_taurus
ENSGACG00000018936	exosc1	94	34.555	WBGene00012966	exos-1	92	34.555	Caenorhabditis_elegans
ENSGACG00000018936	exosc1	98	79.581	ENSCJAG00000016586	EXOSC1	98	79.581	Callithrix_jacchus
ENSGACG00000018936	exosc1	98	80.105	ENSCAFG00000009068	EXOSC1	92	80.105	Canis_familiaris
ENSGACG00000018936	exosc1	98	80.105	ENSCAFG00020006002	EXOSC1	92	80.105	Canis_lupus_dingo
ENSGACG00000018936	exosc1	98	80.628	ENSCHIG00000015253	EXOSC1	98	80.628	Capra_hircus
ENSGACG00000018936	exosc1	98	79.058	ENSTSYG00000000760	EXOSC1	98	79.058	Carlito_syrichta
ENSGACG00000018936	exosc1	98	80.105	ENSCPOG00000001173	EXOSC1	98	80.105	Cavia_porcellus
ENSGACG00000018936	exosc1	98	43.523	ENSCCAG00000023986	EXOSC1	98	43.523	Cebus_capucinus
ENSGACG00000018936	exosc1	98	80.105	ENSCATG00000034114	EXOSC1	98	80.105	Cercocebus_atys
ENSGACG00000018936	exosc1	98	80.105	ENSCLAG00000002463	EXOSC1	98	80.105	Chinchilla_lanigera
ENSGACG00000018936	exosc1	98	79.581	ENSCSAG00000005870	EXOSC1	98	79.581	Chlorocebus_sabaeus
ENSGACG00000018936	exosc1	95	67.935	ENSCHOG00000006477	EXOSC1	98	67.935	Choloepus_hoffmanni
ENSGACG00000018936	exosc1	55	69.811	ENSCPBG00000011949	EXOSC1	88	69.811	Chrysemys_picta_bellii
ENSGACG00000018936	exosc1	99	50.777	ENSCING00000022734	-	92	50.777	Ciona_intestinalis
ENSGACG00000018936	exosc1	99	53.368	ENSCSAVG00000010865	-	98	53.368	Ciona_savignyi
ENSGACG00000018936	exosc1	98	80.105	ENSCANG00000034159	EXOSC1	98	80.105	Colobus_angolensis_palliatus
ENSGACG00000018936	exosc1	98	79.058	ENSCGRG00001000335	Exosc1	98	79.058	Cricetulus_griseus_chok1gshd
ENSGACG00000018936	exosc1	98	79.058	ENSCGRG00000011602	Exosc1	98	79.058	Cricetulus_griseus_crigri
ENSGACG00000018936	exosc1	100	79.897	ENSCSEG00000007895	exosc1	97	79.897	Cynoglossus_semilaevis
ENSGACG00000018936	exosc1	100	86.082	ENSCVAG00000016748	exosc1	100	86.082	Cyprinodon_variegatus
ENSGACG00000018936	exosc1	100	91.753	ENSDARG00000059841	exosc1	100	91.753	Danio_rerio
ENSGACG00000018936	exosc1	74	76.552	ENSDNOG00000007983	EXOSC1	98	76.552	Dasypus_novemcinctus
ENSGACG00000018936	exosc1	98	79.581	ENSDORG00000016528	Exosc1	98	79.581	Dipodomys_ordii
ENSGACG00000018936	exosc1	95	47.368	FBgn0032346	Csl4	92	47.368	Drosophila_melanogaster
ENSGACG00000018936	exosc1	98	79.058	ENSETEG00000002469	-	98	79.058	Echinops_telfairi
ENSGACG00000018936	exosc1	97	64.583	ENSEBUG00000008164	exosc1	96	64.583	Eptatretus_burgeri
ENSGACG00000018936	exosc1	98	71.728	ENSEASG00005008684	EXOSC1	98	71.728	Equus_asinus_asinus
ENSGACG00000018936	exosc1	60	57.759	ENSECAG00000010621	EXOSC1	69	57.759	Equus_caballus
ENSGACG00000018936	exosc1	98	79.058	ENSEEUG00000005647	EXOSC1	98	79.058	Erinaceus_europaeus
ENSGACG00000018936	exosc1	99	86.802	ENSELUG00000017369	exosc1	87	86.802	Esox_lucius
ENSGACG00000018936	exosc1	98	80.628	ENSFCAG00000040563	EXOSC1	92	80.628	Felis_catus
ENSGACG00000018936	exosc1	98	77.487	ENSFALG00000008450	EXOSC1	98	77.487	Ficedula_albicollis
ENSGACG00000018936	exosc1	98	80.628	ENSFDAG00000000846	EXOSC1	98	80.628	Fukomys_damarensis
ENSGACG00000018936	exosc1	100	86.082	ENSFHEG00000009154	exosc1	100	86.082	Fundulus_heteroclitus
ENSGACG00000018936	exosc1	100	92.784	ENSGMOG00000008993	exosc1	100	92.784	Gadus_morhua
ENSGACG00000018936	exosc1	98	65.445	ENSGALG00000039917	EXOSC1	99	82.759	Gallus_gallus
ENSGACG00000018936	exosc1	100	86.082	ENSGAFG00000010265	exosc1	95	86.082	Gambusia_affinis
ENSGACG00000018936	exosc1	98	78.534	ENSGAGG00000019192	EXOSC1	98	78.534	Gopherus_agassizii
ENSGACG00000018936	exosc1	98	68.586	ENSGGOG00000003099	EXOSC1	98	68.586	Gorilla_gorilla
ENSGACG00000018936	exosc1	100	93.814	ENSHBUG00000017857	exosc1	100	93.814	Haplochromis_burtoni
ENSGACG00000018936	exosc1	98	80.105	ENSHGLG00000016927	EXOSC1	98	80.105	Heterocephalus_glaber_female
ENSGACG00000018936	exosc1	98	80.105	ENSHGLG00100012208	EXOSC1	98	80.105	Heterocephalus_glaber_male
ENSGACG00000018936	exosc1	100	91.753	ENSHCOG00000019882	exosc1	100	91.753	Hippocampus_comes
ENSGACG00000018936	exosc1	100	88.660	ENSIPUG00000007685	exosc1	100	88.660	Ictalurus_punctatus
ENSGACG00000018936	exosc1	98	79.581	ENSSTOG00000006615	EXOSC1	98	79.581	Ictidomys_tridecemlineatus
ENSGACG00000018936	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSGACG00000018936	exosc1	98	80.105	ENSJJAG00000013311	Exosc1	98	80.105	Jaculus_jaculus
ENSGACG00000018936	exosc1	100	90.206	ENSKMAG00000001202	exosc1	82	90.206	Kryptolebias_marmoratus
ENSGACG00000018936	exosc1	100	93.814	ENSLBEG00000011448	exosc1	100	93.814	Labrus_bergylta
ENSGACG00000018936	exosc1	100	63.000	ENSLOCG00000003776	exosc1	100	63.000	Lepisosteus_oculatus
ENSGACG00000018936	exosc1	98	80.105	ENSLAFG00000015983	EXOSC1	98	80.105	Loxodonta_africana
ENSGACG00000018936	exosc1	98	80.105	ENSMFAG00000001493	EXOSC1	98	80.105	Macaca_fascicularis
ENSGACG00000018936	exosc1	98	80.105	ENSMMUG00000020028	EXOSC1	98	73.333	Macaca_mulatta
ENSGACG00000018936	exosc1	98	80.105	ENSMNEG00000029816	EXOSC1	98	80.105	Macaca_nemestrina
ENSGACG00000018936	exosc1	98	74.346	ENSMLEG00000027643	EXOSC1	98	74.346	Mandrillus_leucophaeus
ENSGACG00000018936	exosc1	100	92.784	ENSMAMG00000012200	exosc1	100	92.784	Mastacembelus_armatus
ENSGACG00000018936	exosc1	100	93.814	ENSMZEG00005007042	exosc1	100	93.814	Maylandia_zebra
ENSGACG00000018936	exosc1	98	68.586	ENSMAUG00000020462	-	98	68.586	Mesocricetus_auratus
ENSGACG00000018936	exosc1	98	80.105	ENSMICG00000007664	EXOSC1	91	80.105	Microcebus_murinus
ENSGACG00000018936	exosc1	98	79.058	ENSMOCG00000006004	-	98	79.058	Microtus_ochrogaster
ENSGACG00000018936	exosc1	97	74.603	ENSMOCG00000017124	-	96	74.603	Microtus_ochrogaster
ENSGACG00000018936	exosc1	100	69.072	ENSMMOG00000021403	exosc1	100	69.072	Mola_mola
ENSGACG00000018936	exosc1	98	79.688	ENSMODG00000004213	EXOSC1	98	79.688	Monodelphis_domestica
ENSGACG00000018936	exosc1	95	92.973	ENSMALG00000007061	exosc1	93	92.973	Monopterus_albus
ENSGACG00000018936	exosc1	98	78.534	MGP_CAROLIEiJ_G0022959	Exosc1	98	78.534	Mus_caroli
ENSGACG00000018936	exosc1	98	78.534	ENSMUSG00000034321	Exosc1	98	78.534	Mus_musculus
ENSGACG00000018936	exosc1	98	79.058	MGP_PahariEiJ_G0014449	Exosc1	98	79.058	Mus_pahari
ENSGACG00000018936	exosc1	98	78.534	MGP_SPRETEiJ_G0023880	Exosc1	98	78.534	Mus_spretus
ENSGACG00000018936	exosc1	98	80.628	ENSMPUG00000017044	EXOSC1	98	80.628	Mustela_putorius_furo
ENSGACG00000018936	exosc1	98	80.105	ENSMLUG00000009228	EXOSC1	98	80.105	Myotis_lucifugus
ENSGACG00000018936	exosc1	98	77.487	ENSNGAG00000022033	Exosc1	98	77.487	Nannospalax_galili
ENSGACG00000018936	exosc1	100	73.196	ENSNBRG00000024007	exosc1	99	73.196	Neolamprologus_brichardi
ENSGACG00000018936	exosc1	98	79.581	ENSNLEG00000013872	EXOSC1	98	79.581	Nomascus_leucogenys
ENSGACG00000018936	exosc1	58	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSGACG00000018936	exosc1	98	79.581	ENSOPRG00000005065	EXOSC1	98	79.581	Ochotona_princeps
ENSGACG00000018936	exosc1	98	80.628	ENSODEG00000016709	EXOSC1	98	80.628	Octodon_degus
ENSGACG00000018936	exosc1	100	94.330	ENSONIG00000017683	exosc1	99	94.330	Oreochromis_niloticus
ENSGACG00000018936	exosc1	59	89.474	ENSOANG00000006563	EXOSC1	98	86.179	Ornithorhynchus_anatinus
ENSGACG00000018936	exosc1	98	78.646	ENSOCUG00000011898	-	98	78.646	Oryctolagus_cuniculus
ENSGACG00000018936	exosc1	98	74.346	ENSOCUG00000026461	-	98	74.346	Oryctolagus_cuniculus
ENSGACG00000018936	exosc1	100	88.718	ENSORLG00000011595	exosc1	100	88.718	Oryzias_latipes
ENSGACG00000018936	exosc1	100	88.718	ENSORLG00020005831	exosc1	100	88.718	Oryzias_latipes_hni
ENSGACG00000018936	exosc1	100	88.718	ENSORLG00015004317	exosc1	100	88.718	Oryzias_latipes_hsok
ENSGACG00000018936	exosc1	100	73.196	ENSOMEG00000013907	exosc1	99	73.196	Oryzias_melastigma
ENSGACG00000018936	exosc1	98	79.581	ENSOGAG00000016259	EXOSC1	98	79.581	Otolemur_garnettii
ENSGACG00000018936	exosc1	98	80.105	ENSOARG00000010136	EXOSC1	98	80.105	Ovis_aries
ENSGACG00000018936	exosc1	98	74.093	ENSPPAG00000039842	EXOSC1	98	74.093	Pan_paniscus
ENSGACG00000018936	exosc1	98	80.628	ENSPPRG00000023366	EXOSC1	98	80.628	Panthera_pardus
ENSGACG00000018936	exosc1	98	80.628	ENSPTIG00000017701	EXOSC1	98	80.628	Panthera_tigris_altaica
ENSGACG00000018936	exosc1	98	80.105	ENSPTRG00000002808	EXOSC1	98	80.105	Pan_troglodytes
ENSGACG00000018936	exosc1	98	80.105	ENSPANG00000021324	EXOSC1	98	80.105	Papio_anubis
ENSGACG00000018936	exosc1	100	88.660	ENSPKIG00000016037	exosc1	100	88.660	Paramormyrops_kingsleyae
ENSGACG00000018936	exosc1	91	66.316	ENSPSIG00000013571	EXOSC1	98	79.339	Pelodiscus_sinensis
ENSGACG00000018936	exosc1	100	79.897	ENSPMGG00000014002	exosc1	100	79.897	Periophthalmus_magnuspinnatus
ENSGACG00000018936	exosc1	98	79.058	ENSPEMG00000010710	-	98	79.058	Peromyscus_maniculatus_bairdii
ENSGACG00000018936	exosc1	95	70.430	ENSPMAG00000000195	exosc1	95	70.430	Petromyzon_marinus
ENSGACG00000018936	exosc1	98	79.581	ENSPCIG00000002210	EXOSC1	97	79.581	Phascolarctos_cinereus
ENSGACG00000018936	exosc1	100	85.052	ENSPFOG00000006755	exosc1	95	85.052	Poecilia_formosa
ENSGACG00000018936	exosc1	100	85.052	ENSPLAG00000005880	exosc1	100	85.052	Poecilia_latipinna
ENSGACG00000018936	exosc1	100	85.052	ENSPMEG00000015598	exosc1	95	85.052	Poecilia_mexicana
ENSGACG00000018936	exosc1	100	73.711	ENSPREG00000000405	exosc1	94	73.711	Poecilia_reticulata
ENSGACG00000018936	exosc1	98	80.105	ENSPPYG00000002531	EXOSC1	98	80.105	Pongo_abelii
ENSGACG00000018936	exosc1	98	79.058	ENSPCAG00000009135	EXOSC1	98	79.058	Procavia_capensis
ENSGACG00000018936	exosc1	98	73.822	ENSPCOG00000027539	EXOSC1	98	73.822	Propithecus_coquereli
ENSGACG00000018936	exosc1	98	80.105	ENSPVAG00000003372	EXOSC1	98	80.105	Pteropus_vampyrus
ENSGACG00000018936	exosc1	100	93.814	ENSPNYG00000021745	exosc1	100	93.814	Pundamilia_nyererei
ENSGACG00000018936	exosc1	100	90.206	ENSPNAG00000001944	exosc1	100	90.206	Pygocentrus_nattereri
ENSGACG00000018936	exosc1	98	79.058	ENSRNOG00000048708	Exosc1	98	79.058	Rattus_norvegicus
ENSGACG00000018936	exosc1	98	80.105	ENSRBIG00000035618	EXOSC1	98	80.105	Rhinopithecus_bieti
ENSGACG00000018936	exosc1	98	80.105	ENSRROG00000032589	EXOSC1	91	80.105	Rhinopithecus_roxellana
ENSGACG00000018936	exosc1	64	36.250	YNL232W	CSL4	54	36.250	Saccharomyces_cerevisiae
ENSGACG00000018936	exosc1	98	80.105	ENSSBOG00000000359	EXOSC1	98	80.105	Saimiri_boliviensis_boliviensis
ENSGACG00000018936	exosc1	75	87.671	ENSSHAG00000018219	EXOSC1	99	87.671	Sarcophilus_harrisii
ENSGACG00000018936	exosc1	100	88.660	ENSSFOG00015009069	exosc1	100	88.660	Scleropages_formosus
ENSGACG00000018936	exosc1	100	85.052	ENSSFOG00015016289	-	100	85.052	Scleropages_formosus
ENSGACG00000018936	exosc1	100	94.845	ENSSMAG00000003721	exosc1	100	94.845	Scophthalmus_maximus
ENSGACG00000018936	exosc1	100	94.330	ENSSDUG00000002993	exosc1	100	94.330	Seriola_dumerili
ENSGACG00000018936	exosc1	100	94.330	ENSSLDG00000025181	exosc1	100	94.330	Seriola_lalandi_dorsalis
ENSGACG00000018936	exosc1	98	69.110	ENSSARG00000000162	EXOSC1	98	69.110	Sorex_araneus
ENSGACG00000018936	exosc1	98	74.869	ENSSPUG00000012263	EXOSC1	98	74.869	Sphenodon_punctatus
ENSGACG00000018936	exosc1	100	86.598	ENSSPAG00000016792	exosc1	83	86.598	Stegastes_partitus
ENSGACG00000018936	exosc1	98	79.581	ENSSSCG00000010518	EXOSC1	89	79.581	Sus_scrofa
ENSGACG00000018936	exosc1	98	76.963	ENSTGUG00000009692	EXOSC1	98	76.963	Taeniopygia_guttata
ENSGACG00000018936	exosc1	98	81.053	ENSTRUG00000007706	exosc1	98	81.053	Takifugu_rubripes
ENSGACG00000018936	exosc1	98	79.275	ENSTNIG00000014079	exosc1	97	79.275	Tetraodon_nigroviridis
ENSGACG00000018936	exosc1	98	73.298	ENSTBEG00000006011	EXOSC1	98	73.298	Tupaia_belangeri
ENSGACG00000018936	exosc1	94	81.967	ENSTTRG00000009887	EXOSC1	99	81.967	Tursiops_truncatus
ENSGACG00000018936	exosc1	98	64.921	ENSUAMG00000010266	EXOSC1	98	64.921	Ursus_americanus
ENSGACG00000018936	exosc1	98	64.921	ENSUMAG00000022002	EXOSC1	98	64.921	Ursus_maritimus
ENSGACG00000018936	exosc1	98	80.105	ENSVVUG00000023192	EXOSC1	62	80.105	Vulpes_vulpes
ENSGACG00000018936	exosc1	99	76.166	ENSXETG00000003434	exosc1	99	76.166	Xenopus_tropicalis
ENSGACG00000018936	exosc1	62	87.603	ENSXCOG00000014499	exosc1	93	87.603	Xiphophorus_couchianus
ENSGACG00000018936	exosc1	100	74.227	ENSXMAG00000023382	exosc1	94	74.227	Xiphophorus_maculatus