EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018990 (Gene tree)
Gene ID: -
Gene Symbol: khsrp
Alias: fc10e10|fc94c12|sb:eu1000|sb:eu1001|wu:fb25b12|wu:fc10e10|wu:fc94c12|zgc:163038
Full Name: KH-type splicing regulatory protein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9640 bases
Position: chrgroupIX:15069110-15078749
Accession: ZDB-GENE-030131-4357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025105	KH_1	PF00013.29	7e-68	1	4
ENSGACP00000025105	KH_1	PF00013.29	7e-68	2	4
ENSGACP00000025105	KH_1	PF00013.29	7e-68	3	4
ENSGACP00000025105	KH_1	PF00013.29	7e-68	4	4
ENSGACP00000025105	DUF1897	PF09005.10	9.7e-12	1	2
ENSGACP00000025105	DUF1897	PF09005.10	9.7e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025154	-	2179	-	ENSGACP00000025105	684 (aa)	-	G3Q5E9

Gene Model

Click here to download ENSGACG00000018990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018990	khsrp	54	42.188	ENSGACG00000006681	PCBP2	68	42.188
ENSGACG00000018990	khsrp	86	38.424	ENSGACG00000000957	-	95	37.686
ENSGACG00000018990	khsrp	88	68.203	ENSGACG00000012422	KHSRP	95	62.751
ENSGACG00000018990	khsrp	54	39.062	ENSGACG00000003197	pcbp2	70	39.394
ENSGACG00000018990	khsrp	89	54.180	ENSGACG00000016563	fubp1	97	53.427
ENSGACG00000018990	khsrp	50	41.176	ENSGACG00000002266	-	67	41.176
ENSGACG00000018990	khsrp	50	38.806	ENSGACG00000002664	-	54	36.986
ENSGACG00000018990	khsrp	87	42.532	ENSGACG00000016704	fubp3	95	40.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018990	khsrp	86	66.335	ENSG00000088247	KHSRP	100	75.148	Homo_sapiens
ENSGACG00000018990	khsrp	64	72.979	ENSAPOG00000012989	KHSRP	98	64.947	Acanthochromis_polyacanthus
ENSGACG00000018990	khsrp	84	87.097	ENSAPOG00000009524	khsrp	99	81.880	Acanthochromis_polyacanthus
ENSGACG00000018990	khsrp	89	83.784	ENSACIG00000009298	khsrp	98	83.228	Amphilophus_citrinellus
ENSGACG00000018990	khsrp	88	85.377	ENSAOCG00000010049	khsrp	98	80.374	Amphiprion_ocellaris
ENSGACG00000018990	khsrp	64	73.191	ENSAOCG00000010189	KHSRP	98	65.099	Amphiprion_ocellaris
ENSGACG00000018990	khsrp	64	73.191	ENSAPEG00000008575	KHSRP	98	65.099	Amphiprion_percula
ENSGACG00000018990	khsrp	88	85.377	ENSAPEG00000013411	khsrp	98	80.374	Amphiprion_percula
ENSGACG00000018990	khsrp	93	62.573	ENSATEG00000024744	KHSRP	72	69.083	Anabas_testudineus
ENSGACG00000018990	khsrp	89	82.380	ENSATEG00000019332	khsrp	98	79.846	Anabas_testudineus
ENSGACG00000018990	khsrp	81	67.974	ENSANAG00000027617	KHSRP	84	59.903	Aotus_nancymaae
ENSGACG00000018990	khsrp	62	60.544	ENSANAG00000004931	-	98	54.334	Aotus_nancymaae
ENSGACG00000018990	khsrp	90	80.125	ENSACLG00000020487	khsrp	98	75.739	Astatotilapia_calliptera
ENSGACG00000018990	khsrp	92	62.219	ENSACLG00000001424	KHSRP	88	63.636	Astatotilapia_calliptera
ENSGACG00000018990	khsrp	89	71.053	ENSAMXG00000036582	khsrp	97	68.510	Astyanax_mexicanus
ENSGACG00000018990	khsrp	62	60.317	ENSBTAG00000008926	FUBP1	98	54.180	Bos_taurus
ENSGACG00000018990	khsrp	86	64.818	ENSBTAG00000021018	KHSRP	89	65.156	Bos_taurus
ENSGACG00000018990	khsrp	86	65.183	ENSCAFG00020019133	KHSRP	83	63.492	Canis_lupus_dingo
ENSGACG00000018990	khsrp	62	60.544	ENSCAFG00020015251	-	98	52.774	Canis_lupus_dingo
ENSGACG00000018990	khsrp	65	57.576	ENSCHIG00000013418	-	98	54.334	Capra_hircus
ENSGACG00000018990	khsrp	93	59.118	ENSCHIG00000027053	KHSRP	81	61.047	Capra_hircus
ENSGACG00000018990	khsrp	84	64.610	ENSTSYG00000011552	KHSRP	86	65.316	Carlito_syrichta
ENSGACG00000018990	khsrp	70	66.864	ENSCAPG00000005534	KHSRP	82	67.906	Cavia_aperea
ENSGACG00000018990	khsrp	86	67.381	ENSCCAG00000025297	KHSRP	89	67.961	Cebus_capucinus
ENSGACG00000018990	khsrp	87	63.666	ENSCATG00000036458	KHSRP	89	66.900	Cercocebus_atys
ENSGACG00000018990	khsrp	84	64.007	ENSCLAG00000007309	KHSRP	84	64.123	Chinchilla_lanigera
ENSGACG00000018990	khsrp	62	60.998	ENSCPBG00000016987	-	97	53.394	Chrysemys_picta_bellii
ENSGACG00000018990	khsrp	62	60.771	ENSCANG00000034534	-	96	54.644	Colobus_angolensis_palliatus
ENSGACG00000018990	khsrp	84	67.622	ENSCANG00000015665	KHSRP	92	68.013	Colobus_angolensis_palliatus
ENSGACG00000018990	khsrp	86	65.714	ENSCGRG00001011031	Khsrp	84	61.429	Cricetulus_griseus_chok1gshd
ENSGACG00000018990	khsrp	80	66.899	ENSCGRG00000015331	Khsrp	85	67.188	Cricetulus_griseus_crigri
ENSGACG00000018990	khsrp	90	75.394	ENSCSEG00000011429	khsrp	99	72.843	Cynoglossus_semilaevis
ENSGACG00000018990	khsrp	88	80.312	ENSCVAG00000001873	khsrp	98	78.140	Cyprinodon_variegatus
ENSGACG00000018990	khsrp	62	74.505	ENSDARG00000026489	khsrp	100	70.870	Danio_rerio
ENSGACG00000018990	khsrp	84	64.935	ENSDNOG00000046507	KHSRP	82	64.687	Dasypus_novemcinctus
ENSGACG00000018990	khsrp	84	59.770	ENSDORG00000002447	Khsrp	66	72.019	Dipodomys_ordii
ENSGACG00000018990	khsrp	86	59.802	ENSETEG00000004793	KHSRP	90	59.903	Echinops_telfairi
ENSGACG00000018990	khsrp	62	60.544	ENSEASG00005016990	-	98	54.489	Equus_asinus_asinus
ENSGACG00000018990	khsrp	62	60.544	ENSECAG00000010867	FUBP1	98	54.489	Equus_caballus
ENSGACG00000018990	khsrp	89	67.988	ENSELUG00000008445	-	98	65.601	Esox_lucius
ENSGACG00000018990	khsrp	74	77.714	ENSELUG00000016310	khsrp	99	68.485	Esox_lucius
ENSGACG00000018990	khsrp	88	65.428	ENSFCAG00000003731	KHSRP	84	66.071	Felis_catus
ENSGACG00000018990	khsrp	62	60.544	ENSFCAG00000010330	-	98	54.334	Felis_catus
ENSGACG00000018990	khsrp	71	53.502	ENSFDAG00000010889	KHSRP	89	47.871	Fukomys_damarensis
ENSGACG00000018990	khsrp	91	74.769	ENSFHEG00000009577	khsrp	98	73.270	Fundulus_heteroclitus
ENSGACG00000018990	khsrp	100	75.472	ENSGMOG00000002166	khsrp	100	73.837	Gadus_morhua
ENSGACG00000018990	khsrp	88	79.905	ENSGAFG00000010469	khsrp	98	77.273	Gambusia_affinis
ENSGACG00000018990	khsrp	62	60.998	ENSGAGG00000019219	-	98	53.394	Gopherus_agassizii
ENSGACG00000018990	khsrp	84	65.366	ENSGGOG00000007028	KHSRP	92	66.214	Gorilla_gorilla
ENSGACG00000018990	khsrp	62	60.771	ENSGGOG00000027554	FUBP1	98	54.954	Gorilla_gorilla
ENSGACG00000018990	khsrp	90	79.969	ENSHBUG00000018543	khsrp	98	75.583	Haplochromis_burtoni
ENSGACG00000018990	khsrp	89	67.178	ENSHBUG00000014760	KHSRP	94	65.062	Haplochromis_burtoni
ENSGACG00000018990	khsrp	73	52.354	ENSHGLG00100000480	KHSRP	66	56.322	Heterocephalus_glaber_male
ENSGACG00000018990	khsrp	88	80.824	ENSHCOG00000020488	khsrp	98	77.237	Hippocampus_comes
ENSGACG00000018990	khsrp	90	68.311	ENSIPUG00000008034	khsrp	98	66.816	Ictalurus_punctatus
ENSGACG00000018990	khsrp	84	64.448	ENSSTOG00000002371	KHSRP	92	65.154	Ictidomys_tridecemlineatus
ENSGACG00000018990	khsrp	88	82.019	ENSKMAG00000018579	khsrp	98	80.781	Kryptolebias_marmoratus
ENSGACG00000018990	khsrp	85	81.852	ENSLBEG00000005191	khsrp	95	82.778	Labrus_bergylta
ENSGACG00000018990	khsrp	87	61.950	ENSLACG00000002072	KHSRP	91	62.016	Latimeria_chalumnae
ENSGACG00000018990	khsrp	60	60.094	ENSLACG00000012547	-	96	52.951	Latimeria_chalumnae
ENSGACG00000018990	khsrp	87	69.449	ENSLOCG00000006229	khsrp	93	70.161	Lepisosteus_oculatus
ENSGACG00000018990	khsrp	84	66.836	ENSLAFG00000002426	KHSRP	97	67.340	Loxodonta_africana
ENSGACG00000018990	khsrp	83	64.967	ENSMFAG00000000292	KHSRP	88	55.897	Macaca_fascicularis
ENSGACG00000018990	khsrp	86	63.622	ENSMMUG00000005597	KHSRP	85	62.282	Macaca_mulatta
ENSGACG00000018990	khsrp	86	67.545	ENSMNEG00000036982	KHSRP	89	67.961	Macaca_nemestrina
ENSGACG00000018990	khsrp	84	65.366	ENSMLEG00000030501	KHSRP	97	65.478	Mandrillus_leucophaeus
ENSGACG00000018990	khsrp	62	60.771	ENSMLEG00000032973	-	97	54.620	Mandrillus_leucophaeus
ENSGACG00000018990	khsrp	64	70.897	ENSMAMG00000023639	KHSRP	95	63.764	Mastacembelus_armatus
ENSGACG00000018990	khsrp	88	83.441	ENSMAMG00000011746	khsrp	96	78.822	Mastacembelus_armatus
ENSGACG00000018990	khsrp	89	67.178	ENSMZEG00005011227	KHSRP	94	65.062	Maylandia_zebra
ENSGACG00000018990	khsrp	67	95.833	ENSMZEG00005022974	-	89	95.833	Maylandia_zebra
ENSGACG00000018990	khsrp	84	65.902	ENSMAUG00000018966	Khsrp	87	65.579	Mesocricetus_auratus
ENSGACG00000018990	khsrp	62	60.544	ENSMICG00000014463	-	96	54.489	Microcebus_murinus
ENSGACG00000018990	khsrp	86	64.613	ENSMICG00000007863	KHSRP	76	68.221	Microcebus_murinus
ENSGACG00000018990	khsrp	85	66.288	ENSMOCG00000018305	Khsrp	85	65.964	Microtus_ochrogaster
ENSGACG00000018990	khsrp	86	52.059	ENSMMOG00000005097	-	86	64.179	Mola_mola
ENSGACG00000018990	khsrp	58	82.569	ENSMMOG00000021381	-	100	82.569	Mola_mola
ENSGACG00000018990	khsrp	84	62.701	ENSMODG00000001952	KHSRP	92	62.821	Monodelphis_domestica
ENSGACG00000018990	khsrp	88	76.518	ENSMALG00000006104	khsrp	98	71.315	Monopterus_albus
ENSGACG00000018990	khsrp	89	65.781	ENSMALG00000004958	KHSRP	88	62.219	Monopterus_albus
ENSGACG00000018990	khsrp	86	65.556	ENSMUSG00000007670	Khsrp	67	84.663	Mus_musculus
ENSGACG00000018990	khsrp	84	65.366	ENSMLUG00000015543	KHSRP	92	65.316	Myotis_lucifugus
ENSGACG00000018990	khsrp	89	81.059	ENSNBRG00000023797	khsrp	96	80.542	Neolamprologus_brichardi
ENSGACG00000018990	khsrp	89	65.549	ENSNBRG00000005876	KHSRP	93	63.937	Neolamprologus_brichardi
ENSGACG00000018990	khsrp	88	61.695	ENSNLEG00000015923	KHSRP	91	61.551	Nomascus_leucogenys
ENSGACG00000018990	khsrp	73	65.820	ENSMEUG00000016601	KHSRP	82	66.871	Notamacropus_eugenii
ENSGACG00000018990	khsrp	86	56.829	ENSODEG00000015021	KHSRP	89	52.674	Octodon_degus
ENSGACG00000018990	khsrp	65	70.440	ENSONIG00000002163	KHSRP	94	64.000	Oreochromis_niloticus
ENSGACG00000018990	khsrp	89	84.566	ENSONIG00000017713	khsrp	98	78.003	Oreochromis_niloticus
ENSGACG00000018990	khsrp	84	61.551	ENSOANG00000000261	KHSRP	92	60.840	Ornithorhynchus_anatinus
ENSGACG00000018990	khsrp	62	68.468	ENSOCUG00000026747	-	94	69.470	Oryctolagus_cuniculus
ENSGACG00000018990	khsrp	88	78.199	ENSORLG00000011882	khsrp	96	77.308	Oryzias_latipes
ENSGACG00000018990	khsrp	88	76.077	ENSORLG00020005284	khsrp	96	75.197	Oryzias_latipes_hni
ENSGACG00000018990	khsrp	88	80.255	ENSORLG00015003791	khsrp	98	79.022	Oryzias_latipes_hsok
ENSGACG00000018990	khsrp	91	79.753	ENSOMEG00000013233	khsrp	98	78.110	Oryzias_melastigma
ENSGACG00000018990	khsrp	69	69.309	ENSOARG00000005881	KHSRP	97	69.919	Ovis_aries
ENSGACG00000018990	khsrp	83	64.736	ENSPPAG00000036398	-	70	73.223	Pan_paniscus
ENSGACG00000018990	khsrp	62	60.771	ENSPPAG00000038243	-	98	53.715	Pan_paniscus
ENSGACG00000018990	khsrp	83	65.636	ENSPPAG00000036395	-	88	66.381	Pan_paniscus
ENSGACG00000018990	khsrp	89	59.219	ENSPPRG00000008001	KHSRP	84	60.000	Panthera_pardus
ENSGACG00000018990	khsrp	62	60.771	ENSPTRG00000000888	FUBP1	98	54.954	Pan_troglodytes
ENSGACG00000018990	khsrp	86	65.947	ENSPTRG00000010364	KHSRP	84	66.176	Pan_troglodytes
ENSGACG00000018990	khsrp	86	65.714	ENSPANG00000000103	KHSRP	84	64.715	Papio_anubis
ENSGACG00000018990	khsrp	62	60.544	ENSPANG00000004797	-	98	54.799	Papio_anubis
ENSGACG00000018990	khsrp	96	49.647	ENSPKIG00000009065	-	98	52.055	Paramormyrops_kingsleyae
ENSGACG00000018990	khsrp	91	66.667	ENSPKIG00000005077	KHSRP	96	67.136	Paramormyrops_kingsleyae
ENSGACG00000018990	khsrp	89	68.817	ENSPKIG00000003200	khsrp	90	67.021	Paramormyrops_kingsleyae
ENSGACG00000018990	khsrp	60	72.447	ENSPSIG00000008244	KHSRP	65	73.934	Pelodiscus_sinensis
ENSGACG00000018990	khsrp	83	70.000	ENSPMGG00000016443	khsrp	99	64.594	Periophthalmus_magnuspinnatus
ENSGACG00000018990	khsrp	84	66.500	ENSPEMG00000022853	Khsrp	88	66.998	Peromyscus_maniculatus_bairdii
ENSGACG00000018990	khsrp	62	60.771	ENSPCIG00000022984	-	98	54.743	Phascolarctos_cinereus
ENSGACG00000018990	khsrp	91	75.446	ENSPFOG00000004577	khsrp	98	77.152	Poecilia_formosa
ENSGACG00000018990	khsrp	88	78.145	ENSPLAG00000010763	khsrp	98	77.152	Poecilia_latipinna
ENSGACG00000018990	khsrp	88	78.145	ENSPMEG00000014049	khsrp	98	77.152	Poecilia_mexicana
ENSGACG00000018990	khsrp	88	78.233	ENSPREG00000000419	khsrp	98	77.188	Poecilia_reticulata
ENSGACG00000018990	khsrp	84	65.986	ENSPPYG00000009454	KHSRP	90	66.723	Pongo_abelii
ENSGACG00000018990	khsrp	85	57.120	ENSPPYG00000019172	-	91	54.774	Pongo_abelii
ENSGACG00000018990	khsrp	71	61.630	ENSPCAG00000000246	KHSRP	89	61.373	Procavia_capensis
ENSGACG00000018990	khsrp	83	64.039	ENSPCOG00000027506	KHSRP	89	63.667	Propithecus_coquereli
ENSGACG00000018990	khsrp	90	80.818	ENSPNYG00000001374	khsrp	98	76.704	Pundamilia_nyererei
ENSGACG00000018990	khsrp	94	61.357	ENSPNYG00000014008	KHSRP	89	63.492	Pundamilia_nyererei
ENSGACG00000018990	khsrp	87	72.222	ENSPNAG00000012026	khsrp	98	68.971	Pygocentrus_nattereri
ENSGACG00000018990	khsrp	83	60.951	ENSRBIG00000041605	KHSRP	96	57.895	Rhinopithecus_bieti
ENSGACG00000018990	khsrp	84	65.705	ENSSBOG00000034871	KHSRP	97	65.478	Saimiri_boliviensis_boliviensis
ENSGACG00000018990	khsrp	81	65.990	ENSSHAG00000011383	KHSRP	91	66.105	Sarcophilus_harrisii
ENSGACG00000018990	khsrp	64	74.781	ENSSFOG00015010767	KHSRP	95	66.244	Scleropages_formosus
ENSGACG00000018990	khsrp	87	64.058	ENSSFOG00015018719	khsrp	97	65.070	Scleropages_formosus
ENSGACG00000018990	khsrp	65	67.442	ENSSMAG00000012166	KHSRP	70	67.234	Scophthalmus_maximus
ENSGACG00000018990	khsrp	88	79.692	ENSSMAG00000004167	khsrp	98	80.488	Scophthalmus_maximus
ENSGACG00000018990	khsrp	88	85.110	ENSSDUG00000002390	khsrp	98	86.025	Seriola_dumerili
ENSGACG00000018990	khsrp	90	69.385	ENSSDUG00000002110	KHSRP	98	63.885	Seriola_dumerili
ENSGACG00000018990	khsrp	88	79.812	ENSSLDG00000012993	khsrp	98	81.860	Seriola_lalandi_dorsalis
ENSGACG00000018990	khsrp	90	69.385	ENSSLDG00000025625	KHSRP	98	63.885	Seriola_lalandi_dorsalis
ENSGACG00000018990	khsrp	88	85.133	ENSSPAG00000008349	khsrp	98	80.155	Stegastes_partitus
ENSGACG00000018990	khsrp	63	70.295	ENSSPAG00000008244	KHSRP	88	62.310	Stegastes_partitus
ENSGACG00000018990	khsrp	86	64.976	ENSSSCG00000013538	KHSRP	91	68.240	Sus_scrofa
ENSGACG00000018990	khsrp	62	60.317	ENSSSCG00000003771	-	97	55.818	Sus_scrofa
ENSGACG00000018990	khsrp	90	77.008	ENSTNIG00000014067	khsrp	96	74.355	Tetraodon_nigroviridis
ENSGACG00000018990	khsrp	86	65.008	ENSTTRG00000010390	KHSRP	84	65.303	Tursiops_truncatus
ENSGACG00000018990	khsrp	65	58.079	ENSUAMG00000004961	-	97	56.000	Ursus_americanus
ENSGACG00000018990	khsrp	62	60.544	ENSUMAG00000006022	-	94	54.489	Ursus_maritimus
ENSGACG00000018990	khsrp	60	63.215	ENSVPAG00000010837	-	100	63.760	Vicugna_pacos
ENSGACG00000018990	khsrp	88	63.027	ENSVVUG00000026737	KHSRP	88	63.607	Vulpes_vulpes
ENSGACG00000018990	khsrp	62	60.544	ENSVVUG00000030003	-	91	54.489	Vulpes_vulpes
ENSGACG00000018990	khsrp	64	58.242	ENSXETG00000013137	fubp1	98	51.908	Xenopus_tropicalis
ENSGACG00000018990	khsrp	78	57.366	ENSXETG00000021862	khsrp	97	56.662	Xenopus_tropicalis
ENSGACG00000018990	khsrp	95	77.083	ENSXCOG00000014443	khsrp	94	77.021	Xiphophorus_couchianus
ENSGACG00000018990	khsrp	95	76.618	ENSXMAG00000012876	khsrp	98	76.526	Xiphophorus_maculatus