EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019024 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2765 bases
Position: chrgroupIV:20825379-20828143
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025146	tRNA_Me_trans	PF03054.16	2.1e-129	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025195	-	1599	-	ENSGACP00000025146	423 (aa)	-	G3Q5J0

Gene Model

Click here to download ENSGACG00000019024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019024	trmu	99	66.746	ENSG00000100416	TRMU	96	72.289	Homo_sapiens
ENSGACG00000019024	trmu	100	84.434	ENSAPOG00000014458	trmu	100	84.434	Acanthochromis_polyacanthus
ENSGACG00000019024	trmu	98	66.351	ENSAMEG00000003319	TRMU	99	66.351	Ailuropoda_melanoleuca
ENSGACG00000019024	trmu	100	83.452	ENSACIG00000002101	trmu	100	83.452	Amphilophus_citrinellus
ENSGACG00000019024	trmu	100	85.849	ENSAOCG00000013155	trmu	100	85.849	Amphiprion_ocellaris
ENSGACG00000019024	trmu	100	85.613	ENSAPEG00000013350	trmu	100	85.613	Amphiprion_percula
ENSGACG00000019024	trmu	100	84.161	ENSATEG00000007814	trmu	100	84.161	Anabas_testudineus
ENSGACG00000019024	trmu	93	68.782	ENSAPLG00000016380	TRMU	99	68.782	Anas_platyrhynchos
ENSGACG00000019024	trmu	99	68.171	ENSACAG00000007720	TRMU	99	68.171	Anolis_carolinensis
ENSGACG00000019024	trmu	99	66.903	ENSANAG00000038053	TRMU	99	66.903	Aotus_nancymaae
ENSGACG00000019024	trmu	100	85.343	ENSACLG00000005395	trmu	100	85.343	Astatotilapia_calliptera
ENSGACG00000019024	trmu	99	76.978	ENSAMXG00000005282	trmu	99	76.978	Astyanax_mexicanus
ENSGACG00000019024	trmu	99	66.825	ENSBTAG00000005595	TRMU	99	66.825	Bos_taurus
ENSGACG00000019024	trmu	91	42.569	WBGene00007114	mttu-1	98	42.569	Caenorhabditis_elegans
ENSGACG00000019024	trmu	99	65.558	ENSCJAG00000000198	TRMU	98	65.558	Callithrix_jacchus
ENSGACG00000019024	trmu	100	66.430	ENSCAFG00000000779	TRMU	98	66.588	Canis_familiaris
ENSGACG00000019024	trmu	100	66.430	ENSCAFG00020009184	TRMU	98	66.588	Canis_lupus_dingo
ENSGACG00000019024	trmu	100	66.745	ENSCHIG00000017074	TRMU	100	66.745	Capra_hircus
ENSGACG00000019024	trmu	99	67.542	ENSTSYG00000003853	TRMU	98	67.542	Carlito_syrichta
ENSGACG00000019024	trmu	96	63.121	ENSCAPG00000013034	TRMU	97	63.121	Cavia_aperea
ENSGACG00000019024	trmu	99	66.826	ENSCPOG00000020780	TRMU	98	66.826	Cavia_porcellus
ENSGACG00000019024	trmu	99	65.574	ENSCCAG00000021641	TRMU	99	65.574	Cebus_capucinus
ENSGACG00000019024	trmu	96	67.734	ENSCATG00000032800	TRMU	95	67.734	Cercocebus_atys
ENSGACG00000019024	trmu	98	67.952	ENSCLAG00000017269	TRMU	97	67.952	Chinchilla_lanigera
ENSGACG00000019024	trmu	99	66.508	ENSCSAG00000005279	TRMU	98	66.508	Chlorocebus_sabaeus
ENSGACG00000019024	trmu	89	71.088	ENSCPBG00000011621	TRMU	93	71.088	Chrysemys_picta_bellii
ENSGACG00000019024	trmu	94	46.750	ENSCING00000019371	-	96	46.750	Ciona_intestinalis
ENSGACG00000019024	trmu	99	66.508	ENSCANG00000041645	TRMU	98	66.508	Colobus_angolensis_palliatus
ENSGACG00000019024	trmu	99	65.632	ENSCGRG00001001739	Trmu	98	65.632	Cricetulus_griseus_chok1gshd
ENSGACG00000019024	trmu	99	60.621	ENSCGRG00000002781	Trmu	98	60.621	Cricetulus_griseus_crigri
ENSGACG00000019024	trmu	99	77.197	ENSCSEG00000012382	trmu	99	77.197	Cynoglossus_semilaevis
ENSGACG00000019024	trmu	100	83.688	ENSCVAG00000001366	trmu	100	83.688	Cyprinodon_variegatus
ENSGACG00000019024	trmu	100	71.868	ENSDARG00000043734	trmu	100	71.868	Danio_rerio
ENSGACG00000019024	trmu	62	57.197	ENSDNOG00000047245	-	98	55.714	Dasypus_novemcinctus
ENSGACG00000019024	trmu	98	67.548	ENSDORG00000007455	Trmu	99	67.548	Dipodomys_ordii
ENSGACG00000019024	trmu	93	44.020	FBgn0040337	CG3021	95	44.020	Drosophila_melanogaster
ENSGACG00000019024	trmu	93	54.774	ENSEBUG00000007454	trmu	99	53.714	Eptatretus_burgeri
ENSGACG00000019024	trmu	96	68.719	ENSEASG00005021725	TRMU	95	68.719	Equus_asinus_asinus
ENSGACG00000019024	trmu	96	68.719	ENSECAG00000000467	TRMU	95	68.719	Equus_caballus
ENSGACG00000019024	trmu	66	53.214	ENSEEUG00000000074	-	67	53.214	Erinaceus_europaeus
ENSGACG00000019024	trmu	100	77.358	ENSELUG00000009464	trmu	99	78.933	Esox_lucius
ENSGACG00000019024	trmu	98	68.269	ENSFCAG00000006533	TRMU	97	68.269	Felis_catus
ENSGACG00000019024	trmu	93	67.662	ENSFALG00000010035	TRMU	100	67.662	Ficedula_albicollis
ENSGACG00000019024	trmu	92	66.067	ENSFDAG00000017472	TRMU	97	66.067	Fukomys_damarensis
ENSGACG00000019024	trmu	100	82.033	ENSFHEG00000003162	trmu	100	82.033	Fundulus_heteroclitus
ENSGACG00000019024	trmu	97	73.171	ENSGMOG00000001323	trmu	100	73.171	Gadus_morhua
ENSGACG00000019024	trmu	99	68.150	ENSGALG00000031922	TRMU	99	68.150	Gallus_gallus
ENSGACG00000019024	trmu	96	84.559	ENSGAFG00000013331	trmu	96	84.559	Gambusia_affinis
ENSGACG00000019024	trmu	99	66.508	ENSGGOG00000000203	TRMU	98	66.508	Gorilla_gorilla
ENSGACG00000019024	trmu	100	84.870	ENSHBUG00000023421	trmu	100	84.870	Haplochromis_burtoni
ENSGACG00000019024	trmu	99	66.348	ENSHGLG00000009278	TRMU	98	66.348	Heterocephalus_glaber_female
ENSGACG00000019024	trmu	99	66.348	ENSHGLG00100018863	TRMU	98	66.348	Heterocephalus_glaber_male
ENSGACG00000019024	trmu	99	81.280	ENSHCOG00000013459	trmu	99	81.280	Hippocampus_comes
ENSGACG00000019024	trmu	100	75.177	ENSIPUG00000009785	trmu	100	75.177	Ictalurus_punctatus
ENSGACG00000019024	trmu	99	66.667	ENSSTOG00000010993	TRMU	99	66.667	Ictidomys_tridecemlineatus
ENSGACG00000019024	trmu	96	66.995	ENSJJAG00000000667	Trmu	96	66.995	Jaculus_jaculus
ENSGACG00000019024	trmu	100	81.797	ENSKMAG00000008516	trmu	100	81.797	Kryptolebias_marmoratus
ENSGACG00000019024	trmu	100	84.634	ENSLBEG00000018831	trmu	100	84.634	Labrus_bergylta
ENSGACG00000019024	trmu	99	73.050	ENSLACG00000013713	TRMU	99	73.050	Latimeria_chalumnae
ENSGACG00000019024	trmu	99	75.000	ENSLOCG00000016066	trmu	99	75.000	Lepisosteus_oculatus
ENSGACG00000019024	trmu	97	60.145	ENSLAFG00000005129	TRMU	97	60.145	Loxodonta_africana
ENSGACG00000019024	trmu	99	66.508	ENSMFAG00000039767	TRMU	98	66.508	Macaca_fascicularis
ENSGACG00000019024	trmu	99	66.508	ENSMMUG00000000807	TRMU	98	66.508	Macaca_mulatta
ENSGACG00000019024	trmu	99	66.508	ENSMNEG00000028164	TRMU	98	66.508	Macaca_nemestrina
ENSGACG00000019024	trmu	96	67.734	ENSMLEG00000033884	TRMU	95	67.734	Mandrillus_leucophaeus
ENSGACG00000019024	trmu	100	83.924	ENSMAMG00000004717	trmu	100	83.924	Mastacembelus_armatus
ENSGACG00000019024	trmu	100	85.343	ENSMZEG00005015797	trmu	100	85.343	Maylandia_zebra
ENSGACG00000019024	trmu	80	67.341	ENSMGAG00000007550	TRMU	100	67.341	Meleagris_gallopavo
ENSGACG00000019024	trmu	99	64.692	ENSMAUG00000022282	Trmu	99	64.692	Mesocricetus_auratus
ENSGACG00000019024	trmu	97	66.667	ENSMICG00000029046	TRMU	99	66.667	Microcebus_murinus
ENSGACG00000019024	trmu	96	66.256	ENSMOCG00000014641	Trmu	96	66.256	Microtus_ochrogaster
ENSGACG00000019024	trmu	100	78.960	ENSMMOG00000007229	trmu	100	78.960	Mola_mola
ENSGACG00000019024	trmu	98	64.200	ENSMODG00000007433	TRMU	96	64.200	Monodelphis_domestica
ENSGACG00000019024	trmu	100	84.161	ENSMALG00000007721	trmu	100	84.161	Monopterus_albus
ENSGACG00000019024	trmu	96	66.256	MGP_CAROLIEiJ_G0020134	Trmu	96	66.256	Mus_caroli
ENSGACG00000019024	trmu	99	65.155	ENSMUSG00000022386	Trmu	99	65.155	Mus_musculus
ENSGACG00000019024	trmu	99	64.916	MGP_PahariEiJ_G0020139	Trmu	99	64.916	Mus_pahari
ENSGACG00000019024	trmu	99	65.155	MGP_SPRETEiJ_G0021031	Trmu	99	65.155	Mus_spretus
ENSGACG00000019024	trmu	99	66.114	ENSMPUG00000002523	TRMU	98	66.114	Mustela_putorius_furo
ENSGACG00000019024	trmu	99	66.271	ENSNGAG00000005132	Trmu	99	66.271	Nannospalax_galili
ENSGACG00000019024	trmu	100	85.106	ENSNBRG00000022690	trmu	100	85.106	Neolamprologus_brichardi
ENSGACG00000019024	trmu	97	67.633	ENSNLEG00000015773	TRMU	97	67.633	Nomascus_leucogenys
ENSGACG00000019024	trmu	79	55.988	ENSMEUG00000000216	TRMU	99	55.821	Notamacropus_eugenii
ENSGACG00000019024	trmu	99	67.542	ENSODEG00000014745	TRMU	99	67.542	Octodon_degus
ENSGACG00000019024	trmu	100	85.343	ENSONIG00000009821	trmu	100	85.343	Oreochromis_niloticus
ENSGACG00000019024	trmu	93	64.051	ENSOANG00000001891	TRMU	99	64.051	Ornithorhynchus_anatinus
ENSGACG00000019024	trmu	91	68.146	ENSOCUG00000003664	TRMU	94	67.250	Oryctolagus_cuniculus
ENSGACG00000019024	trmu	99	79.147	ENSORLG00000019015	trmu	99	79.147	Oryzias_latipes
ENSGACG00000019024	trmu	99	79.621	ENSORLG00020006830	trmu	99	79.621	Oryzias_latipes_hni
ENSGACG00000019024	trmu	99	79.621	ENSORLG00015003907	trmu	99	79.621	Oryzias_latipes_hsok
ENSGACG00000019024	trmu	56	82.278	ENSOMEG00000015541	trmu	86	82.278	Oryzias_melastigma
ENSGACG00000019024	trmu	99	64.858	ENSOGAG00000008096	TRMU	100	64.858	Otolemur_garnettii
ENSGACG00000019024	trmu	100	62.028	ENSOARG00000019475	TRMU	100	62.028	Ovis_aries
ENSGACG00000019024	trmu	99	66.508	ENSPPAG00000033944	TRMU	98	66.508	Pan_paniscus
ENSGACG00000019024	trmu	96	68.719	ENSPPRG00000004197	TRMU	97	67.788	Panthera_pardus
ENSGACG00000019024	trmu	64	71.375	ENSPTIG00000014122	TRMU	97	71.004	Panthera_tigris_altaica
ENSGACG00000019024	trmu	99	66.508	ENSPTRG00000014510	TRMU	98	66.508	Pan_troglodytes
ENSGACG00000019024	trmu	95	67.910	ENSPANG00000023074	TRMU	97	64.516	Papio_anubis
ENSGACG00000019024	trmu	100	74.704	ENSPKIG00000002849	trmu	100	74.704	Paramormyrops_kingsleyae
ENSGACG00000019024	trmu	91	69.330	ENSPSIG00000013020	TRMU	100	69.330	Pelodiscus_sinensis
ENSGACG00000019024	trmu	100	81.087	ENSPMGG00000004083	trmu	100	81.087	Periophthalmus_magnuspinnatus
ENSGACG00000019024	trmu	99	64.929	ENSPEMG00000014007	Trmu	99	64.929	Peromyscus_maniculatus_bairdii
ENSGACG00000019024	trmu	94	65.327	ENSPCIG00000009923	TRMU	97	63.270	Phascolarctos_cinereus
ENSGACG00000019024	trmu	96	80.244	ENSPFOG00000008197	trmu	91	80.244	Poecilia_formosa
ENSGACG00000019024	trmu	99	82.464	ENSPLAG00000008414	trmu	99	82.464	Poecilia_latipinna
ENSGACG00000019024	trmu	100	82.742	ENSPMEG00000004326	trmu	100	82.742	Poecilia_mexicana
ENSGACG00000019024	trmu	99	82.701	ENSPREG00000007980	trmu	99	82.701	Poecilia_reticulata
ENSGACG00000019024	trmu	99	66.983	ENSPPYG00000011949	TRMU	98	66.983	Pongo_abelii
ENSGACG00000019024	trmu	89	61.702	ENSPCAG00000013462	TRMU	95	61.702	Procavia_capensis
ENSGACG00000019024	trmu	97	65.942	ENSPCOG00000016539	TRMU	98	65.942	Propithecus_coquereli
ENSGACG00000019024	trmu	96	62.808	ENSPVAG00000013202	TRMU	96	62.808	Pteropus_vampyrus
ENSGACG00000019024	trmu	100	84.870	ENSPNYG00000005629	trmu	100	84.870	Pundamilia_nyererei
ENSGACG00000019024	trmu	99	77.273	ENSPNAG00000006339	trmu	96	77.273	Pygocentrus_nattereri
ENSGACG00000019024	trmu	99	65.155	ENSRNOG00000016465	Trmu	99	65.155	Rattus_norvegicus
ENSGACG00000019024	trmu	99	65.558	ENSRBIG00000038973	TRMU	98	65.558	Rhinopithecus_bieti
ENSGACG00000019024	trmu	99	65.796	ENSRROG00000004267	TRMU	98	65.796	Rhinopithecus_roxellana
ENSGACG00000019024	trmu	93	33.573	YDL033C	SLM3	93	33.573	Saccharomyces_cerevisiae
ENSGACG00000019024	trmu	99	66.276	ENSSBOG00000030184	TRMU	99	66.276	Saimiri_boliviensis_boliviensis
ENSGACG00000019024	trmu	91	73.247	ENSSFOG00015020664	trmu	99	73.247	Scleropages_formosus
ENSGACG00000019024	trmu	100	85.343	ENSSMAG00000019450	trmu	100	85.343	Scophthalmus_maximus
ENSGACG00000019024	trmu	100	85.816	ENSSDUG00000011913	trmu	100	85.816	Seriola_dumerili
ENSGACG00000019024	trmu	100	85.579	ENSSLDG00000011684	trmu	100	85.579	Seriola_lalandi_dorsalis
ENSGACG00000019024	trmu	99	59.382	ENSSPUG00000017123	TRMU	98	59.382	Sphenodon_punctatus
ENSGACG00000019024	trmu	100	82.979	ENSSPAG00000021875	trmu	100	82.979	Stegastes_partitus
ENSGACG00000019024	trmu	96	66.749	ENSSSCG00000000007	TRMU	99	64.789	Sus_scrofa
ENSGACG00000019024	trmu	89	70.635	ENSTGUG00000003663	-	100	70.635	Taeniopygia_guttata
ENSGACG00000019024	trmu	99	82.857	ENSTRUG00000001231	trmu	100	82.857	Takifugu_rubripes
ENSGACG00000019024	trmu	99	81.754	ENSTNIG00000010484	trmu	98	81.754	Tetraodon_nigroviridis
ENSGACG00000019024	trmu	72	52.778	ENSTBEG00000011276	-	77	52.778	Tupaia_belangeri
ENSGACG00000019024	trmu	95	69.403	ENSTTRG00000004160	TRMU	94	69.403	Tursiops_truncatus
ENSGACG00000019024	trmu	71	70.234	ENSUAMG00000024825	TRMU	97	70.234	Ursus_americanus
ENSGACG00000019024	trmu	97	56.220	ENSUMAG00000019079	TRMU	97	70.229	Ursus_maritimus
ENSGACG00000019024	trmu	53	59.821	ENSVPAG00000000685	-	100	59.821	Vicugna_pacos
ENSGACG00000019024	trmu	100	65.957	ENSVVUG00000024963	TRMU	98	65.957	Vulpes_vulpes
ENSGACG00000019024	trmu	97	72.506	ENSXETG00000023304	trmu	95	72.506	Xenopus_tropicalis
ENSGACG00000019024	trmu	99	81.797	ENSXCOG00000015105	trmu	99	81.797	Xiphophorus_couchianus
ENSGACG00000019024	trmu	99	82.938	ENSXMAG00000006697	trmu	99	82.938	Xiphophorus_maculatus