EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019174 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8450 bases
Position: chrgroupIV:22135364-22143813
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025353	RRM_1	PF00076.22	3.5e-05	1	1
ENSGACP00000025354	RRM_1	PF00076.22	3.8e-05	1	1
ENSGACP00000025353	G-patch	PF01585.23	3.7e-13	1	1
ENSGACP00000025354	G-patch	PF01585.23	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025402	-	1486	-	ENSGACP00000025353	403 (aa)	-	G3Q647
ENSGACT00000025403	-	1530	-	ENSGACP00000025354	421 (aa)	-	G3Q648

Gene Model

Click here to download ENSGACG00000019174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019174	rbm17	99	81.034	ENSG00000134453	RBM17	99	81.034	Homo_sapiens
ENSGACG00000019174	rbm17	99	93.750	ENSAPOG00000007101	rbm17	99	93.750	Acanthochromis_polyacanthus
ENSGACG00000019174	rbm17	99	81.281	ENSAMEG00000002107	RBM17	99	81.281	Ailuropoda_melanoleuca
ENSGACG00000019174	rbm17	99	90.099	ENSACIG00000006251	rbm17	99	90.099	Amphilophus_citrinellus
ENSGACG00000019174	rbm17	99	93.548	ENSAOCG00000014892	rbm17	99	93.548	Amphiprion_ocellaris
ENSGACG00000019174	rbm17	99	93.548	ENSAPEG00000022779	rbm17	99	93.548	Amphiprion_percula
ENSGACG00000019174	rbm17	99	90.261	ENSATEG00000004406	rbm17	99	90.261	Anabas_testudineus
ENSGACG00000019174	rbm17	99	81.773	ENSAPLG00000004190	RBM17	99	81.773	Anas_platyrhynchos
ENSGACG00000019174	rbm17	89	78.723	ENSACAG00000005418	RBM17	99	78.723	Anolis_carolinensis
ENSGACG00000019174	rbm17	99	81.527	ENSANAG00000030127	RBM17	97	85.000	Aotus_nancymaae
ENSGACG00000019174	rbm17	99	69.779	ENSANAG00000019330	-	94	84.348	Aotus_nancymaae
ENSGACG00000019174	rbm17	99	89.552	ENSACLG00000003928	rbm17	99	89.552	Astatotilapia_calliptera
ENSGACG00000019174	rbm17	99	81.991	ENSAMXG00000005853	rbm17	99	82.227	Astyanax_mexicanus
ENSGACG00000019174	rbm17	99	80.049	ENSBTAG00000011094	-	99	80.049	Bos_taurus
ENSGACG00000019174	rbm17	99	81.281	ENSBTAG00000021951	RBM17	99	81.281	Bos_taurus
ENSGACG00000019174	rbm17	72	33.775	WBGene00010233	F58B3.7	96	31.695	Caenorhabditis_elegans
ENSGACG00000019174	rbm17	99	81.527	ENSCJAG00000020573	RBM17	99	81.527	Callithrix_jacchus
ENSGACG00000019174	rbm17	99	81.281	ENSCAFG00000005206	RBM17	99	81.281	Canis_familiaris
ENSGACG00000019174	rbm17	99	76.675	ENSCAFG00020005420	RBM17	99	78.908	Canis_lupus_dingo
ENSGACG00000019174	rbm17	99	81.281	ENSCHIG00000023204	-	99	81.281	Capra_hircus
ENSGACG00000019174	rbm17	99	79.064	ENSCHIG00000019921	-	99	79.064	Capra_hircus
ENSGACG00000019174	rbm17	99	80.685	ENSTSYG00000001165	RBM17	98	86.325	Carlito_syrichta
ENSGACG00000019174	rbm17	96	61.440	ENSCAPG00000006275	RBM17	99	66.757	Cavia_aperea
ENSGACG00000019174	rbm17	99	76.658	ENSCPOG00000005679	RBM17	99	77.913	Cavia_porcellus
ENSGACG00000019174	rbm17	99	81.527	ENSCCAG00000018655	RBM17	97	85.000	Cebus_capucinus
ENSGACG00000019174	rbm17	99	81.034	ENSCATG00000041566	RBM17	94	87.179	Cercocebus_atys
ENSGACG00000019174	rbm17	99	80.440	ENSCLAG00000012195	RBM17	99	80.440	Chinchilla_lanigera
ENSGACG00000019174	rbm17	99	81.034	ENSCSAG00000013564	RBM17	99	81.034	Chlorocebus_sabaeus
ENSGACG00000019174	rbm17	92	64.894	ENSCHOG00000005131	RBM17	100	64.894	Choloepus_hoffmanni
ENSGACG00000019174	rbm17	99	81.975	ENSCPBG00000019836	RBM17	99	81.975	Chrysemys_picta_bellii
ENSGACG00000019174	rbm17	99	45.803	ENSCSAVG00000008782	-	99	46.829	Ciona_savignyi
ENSGACG00000019174	rbm17	97	73.469	ENSCANG00000023715	-	99	73.469	Colobus_angolensis_palliatus
ENSGACG00000019174	rbm17	99	80.788	ENSCANG00000030987	RBM17	94	87.179	Colobus_angolensis_palliatus
ENSGACG00000019174	rbm17	99	80.685	ENSCGRG00001013842	Rbm17	99	80.685	Cricetulus_griseus_chok1gshd
ENSGACG00000019174	rbm17	99	64.198	ENSCGRG00001009256	-	99	64.198	Cricetulus_griseus_chok1gshd
ENSGACG00000019174	rbm17	99	80.685	ENSCGRG00000006907	Rbm17	99	80.685	Cricetulus_griseus_crigri
ENSGACG00000019174	rbm17	99	85.612	ENSCSEG00000018164	rbm17	99	85.891	Cynoglossus_semilaevis
ENSGACG00000019174	rbm17	99	84.328	ENSCVAG00000002476	rbm17	99	84.328	Cyprinodon_variegatus
ENSGACG00000019174	rbm17	99	76.179	ENSDARG00000031346	rbm17	99	78.774	Danio_rerio
ENSGACG00000019174	rbm17	99	81.034	ENSDNOG00000035920	RBM17	99	81.034	Dasypus_novemcinctus
ENSGACG00000019174	rbm17	99	37.143	FBgn0086683	Spf45	99	37.778	Drosophila_melanogaster
ENSGACG00000019174	rbm17	85	82.857	ENSETEG00000006642	RBM17	86	82.857	Echinops_telfairi
ENSGACG00000019174	rbm17	63	69.048	ENSEBUG00000010253	rbm17	83	69.048	Eptatretus_burgeri
ENSGACG00000019174	rbm17	99	75.921	ENSEASG00005019205	-	99	77.396	Equus_asinus_asinus
ENSGACG00000019174	rbm17	92	78.133	ENSEASG00005009236	-	99	78.133	Equus_asinus_asinus
ENSGACG00000019174	rbm17	99	71.429	ENSECAG00000001379	-	99	71.429	Equus_caballus
ENSGACG00000019174	rbm17	99	68.983	ENSECAG00000008939	RBM17	99	70.968	Equus_caballus
ENSGACG00000019174	rbm17	86	64.857	ENSEEUG00000013077	RBM17	100	64.857	Erinaceus_europaeus
ENSGACG00000019174	rbm17	100	84.149	ENSELUG00000006440	rbm17	100	84.149	Esox_lucius
ENSGACG00000019174	rbm17	99	81.281	ENSFCAG00000031988	RBM17	99	81.281	Felis_catus
ENSGACG00000019174	rbm17	99	81.281	ENSFALG00000001790	RBM17	99	81.281	Ficedula_albicollis
ENSGACG00000019174	rbm17	99	80.440	ENSFDAG00000007470	RBM17	99	80.440	Fukomys_damarensis
ENSGACG00000019174	rbm17	99	87.648	ENSFHEG00000001266	rbm17	99	86.318	Fundulus_heteroclitus
ENSGACG00000019174	rbm17	99	82.254	ENSGMOG00000008438	rbm17	100	82.254	Gadus_morhua
ENSGACG00000019174	rbm17	99	82.020	ENSGALG00000006332	RBM17	99	82.020	Gallus_gallus
ENSGACG00000019174	rbm17	99	89.330	ENSGAFG00000019879	rbm17	99	89.330	Gambusia_affinis
ENSGACG00000019174	rbm17	99	81.975	ENSGAGG00000019906	RBM17	99	81.975	Gopherus_agassizii
ENSGACG00000019174	rbm17	99	93.035	ENSHBUG00000016624	rbm17	99	93.035	Haplochromis_burtoni
ENSGACG00000019174	rbm17	99	80.440	ENSHGLG00000011580	RBM17	99	80.440	Heterocephalus_glaber_female
ENSGACG00000019174	rbm17	99	65.432	ENSHGLG00100010556	-	99	65.432	Heterocephalus_glaber_male
ENSGACG00000019174	rbm17	99	80.440	ENSHGLG00100010460	RBM17	99	80.440	Heterocephalus_glaber_male
ENSGACG00000019174	rbm17	99	87.857	ENSHCOG00000010865	rbm17	100	87.857	Hippocampus_comes
ENSGACG00000019174	rbm17	99	76.596	ENSIPUG00000007699	Rbm17	99	82.033	Ictalurus_punctatus
ENSGACG00000019174	rbm17	99	80.685	ENSSTOG00000013591	RBM17	99	80.685	Ictidomys_tridecemlineatus
ENSGACG00000019174	rbm17	99	59.606	ENSJJAG00000000993	-	99	57.882	Jaculus_jaculus
ENSGACG00000019174	rbm17	99	80.685	ENSJJAG00000022886	Rbm17	99	80.685	Jaculus_jaculus
ENSGACG00000019174	rbm17	99	89.074	ENSKMAG00000021400	rbm17	99	89.074	Kryptolebias_marmoratus
ENSGACG00000019174	rbm17	99	90.819	ENSLBEG00000000881	rbm17	99	88.836	Labrus_bergylta
ENSGACG00000019174	rbm17	99	65.962	ENSLACG00000017297	RBM17	99	66.432	Latimeria_chalumnae
ENSGACG00000019174	rbm17	99	82.310	ENSLOCG00000015659	rbm17	99	82.310	Lepisosteus_oculatus
ENSGACG00000019174	rbm17	99	80.049	ENSLAFG00000011629	RBM17	99	80.049	Loxodonta_africana
ENSGACG00000019174	rbm17	99	81.034	ENSMFAG00000035521	RBM17	94	87.179	Macaca_fascicularis
ENSGACG00000019174	rbm17	99	81.034	ENSMMUG00000015152	RBM17	94	87.179	Macaca_mulatta
ENSGACG00000019174	rbm17	99	81.034	ENSMNEG00000017264	RBM17	94	87.179	Macaca_nemestrina
ENSGACG00000019174	rbm17	99	81.034	ENSMLEG00000029340	RBM17	94	87.179	Mandrillus_leucophaeus
ENSGACG00000019174	rbm17	99	90.261	ENSMAMG00000000387	rbm17	99	90.261	Mastacembelus_armatus
ENSGACG00000019174	rbm17	99	91.190	ENSMZEG00005015179	rbm17	99	91.190	Maylandia_zebra
ENSGACG00000019174	rbm17	99	80.825	ENSMGAG00000003981	RBM17	99	80.825	Meleagris_gallopavo
ENSGACG00000019174	rbm17	99	80.685	ENSMAUG00000019247	Rbm17	99	80.685	Mesocricetus_auratus
ENSGACG00000019174	rbm17	99	80.685	ENSMICG00000003976	-	99	80.685	Microcebus_murinus
ENSGACG00000019174	rbm17	100	74.155	ENSMICG00000041489	-	100	74.155	Microcebus_murinus
ENSGACG00000019174	rbm17	99	80.685	ENSMOCG00000011847	Rbm17	99	80.685	Microtus_ochrogaster
ENSGACG00000019174	rbm17	93	65.526	ENSMOCG00000014517	-	99	66.053	Microtus_ochrogaster
ENSGACG00000019174	rbm17	99	84.314	ENSMMOG00000010264	rbm17	99	84.314	Mola_mola
ENSGACG00000019174	rbm17	99	81.281	ENSMODG00000016648	RBM17	99	81.281	Monodelphis_domestica
ENSGACG00000019174	rbm17	99	88.389	ENSMALG00000010597	rbm17	99	89.810	Monopterus_albus
ENSGACG00000019174	rbm17	99	80.929	MGP_CAROLIEiJ_G0023173	Rbm17	99	80.929	Mus_caroli
ENSGACG00000019174	rbm17	99	80.929	ENSMUSG00000037197	Rbm17	99	80.929	Mus_musculus
ENSGACG00000019174	rbm17	99	81.174	MGP_PahariEiJ_G0019233	Rbm17	99	81.174	Mus_pahari
ENSGACG00000019174	rbm17	99	80.929	MGP_SPRETEiJ_G0024091	Rbm17	99	80.929	Mus_spretus
ENSGACG00000019174	rbm17	86	80.286	ENSMPUG00000016359	RBM17	96	80.286	Mustela_putorius_furo
ENSGACG00000019174	rbm17	99	79.024	ENSMLUG00000002302	-	99	79.024	Myotis_lucifugus
ENSGACG00000019174	rbm17	99	76.355	ENSMLUG00000025709	-	99	76.355	Myotis_lucifugus
ENSGACG00000019174	rbm17	99	55.419	ENSNGAG00000000663	-	99	55.172	Nannospalax_galili
ENSGACG00000019174	rbm17	99	80.685	ENSNGAG00000000741	Rbm17	99	80.685	Nannospalax_galili
ENSGACG00000019174	rbm17	99	86.567	ENSNBRG00000018148	rbm17	99	86.567	Neolamprologus_brichardi
ENSGACG00000019174	rbm17	99	81.034	ENSNLEG00000033350	RBM17	97	85.000	Nomascus_leucogenys
ENSGACG00000019174	rbm17	99	76.355	ENSMEUG00000011347	RBM17	99	76.355	Notamacropus_eugenii
ENSGACG00000019174	rbm17	99	70.936	ENSOPRG00000002993	RBM17	99	70.936	Ochotona_princeps
ENSGACG00000019174	rbm17	97	62.183	ENSODEG00000007286	-	99	62.183	Octodon_degus
ENSGACG00000019174	rbm17	99	80.488	ENSODEG00000004393	RBM17	99	80.488	Octodon_degus
ENSGACG00000019174	rbm17	99	92.346	ENSONIG00000011838	rbm17	99	92.346	Oreochromis_niloticus
ENSGACG00000019174	rbm17	99	80.590	ENSOANG00000015455	RBM17	99	81.081	Ornithorhynchus_anatinus
ENSGACG00000019174	rbm17	99	88.599	ENSORLG00000028798	rbm17	99	88.599	Oryzias_latipes
ENSGACG00000019174	rbm17	99	88.124	ENSORLG00020004593	rbm17	98	88.124	Oryzias_latipes_hni
ENSGACG00000019174	rbm17	99	90.323	ENSORLG00015000033	rbm17	99	90.323	Oryzias_latipes_hsok
ENSGACG00000019174	rbm17	99	89.074	ENSOMEG00000012060	rbm17	99	89.937	Oryzias_melastigma
ENSGACG00000019174	rbm17	99	80.929	ENSOGAG00000015687	RBM17	99	80.929	Otolemur_garnettii
ENSGACG00000019174	rbm17	99	81.281	ENSOARG00000012975	RBM17	99	81.281	Ovis_aries
ENSGACG00000019174	rbm17	99	81.034	ENSPPAG00000032347	RBM17	97	85.000	Pan_paniscus
ENSGACG00000019174	rbm17	99	81.281	ENSPPRG00000010706	RBM17	99	81.281	Panthera_pardus
ENSGACG00000019174	rbm17	99	81.281	ENSPTIG00000007596	RBM17	99	81.281	Panthera_tigris_altaica
ENSGACG00000019174	rbm17	99	81.034	ENSPTRG00000002265	RBM17	97	85.000	Pan_troglodytes
ENSGACG00000019174	rbm17	99	81.034	ENSPANG00000023425	RBM17	94	87.179	Papio_anubis
ENSGACG00000019174	rbm17	99	79.859	ENSPKIG00000025526	rbm17	99	79.859	Paramormyrops_kingsleyae
ENSGACG00000019174	rbm17	99	75.926	ENSPKIG00000005048	-	99	77.723	Paramormyrops_kingsleyae
ENSGACG00000019174	rbm17	99	80.882	ENSPSIG00000012332	RBM17	99	80.882	Pelodiscus_sinensis
ENSGACG00000019174	rbm17	99	84.864	ENSPMGG00000007980	rbm17	99	84.069	Periophthalmus_magnuspinnatus
ENSGACG00000019174	rbm17	99	80.685	ENSPEMG00000014320	Rbm17	99	80.685	Peromyscus_maniculatus_bairdii
ENSGACG00000019174	rbm17	99	80.882	ENSPCIG00000019260	-	99	80.882	Phascolarctos_cinereus
ENSGACG00000019174	rbm17	99	87.886	ENSPFOG00000013271	rbm17	99	87.886	Poecilia_formosa
ENSGACG00000019174	rbm17	99	87.411	ENSPLAG00000004455	rbm17	99	87.411	Poecilia_latipinna
ENSGACG00000019174	rbm17	99	89.826	ENSPMEG00000014864	rbm17	99	89.826	Poecilia_mexicana
ENSGACG00000019174	rbm17	99	88.571	ENSPREG00000015589	rbm17	99	88.571	Poecilia_reticulata
ENSGACG00000019174	rbm17	81	59.271	ENSPPYG00000019042	-	100	59.271	Pongo_abelii
ENSGACG00000019174	rbm17	99	61.481	ENSPPYG00000019881	-	97	62.595	Pongo_abelii
ENSGACG00000019174	rbm17	99	81.034	ENSPPYG00000002067	RBM17	99	81.034	Pongo_abelii
ENSGACG00000019174	rbm17	99	73.645	ENSPCAG00000016879	RBM17	99	73.645	Procavia_capensis
ENSGACG00000019174	rbm17	99	81.281	ENSPCOG00000027881	RBM17	99	81.281	Propithecus_coquereli
ENSGACG00000019174	rbm17	99	73.153	ENSPVAG00000015499	RBM17	99	73.153	Pteropus_vampyrus
ENSGACG00000019174	rbm17	99	82.338	ENSPNYG00000015274	rbm17	99	82.338	Pundamilia_nyererei
ENSGACG00000019174	rbm17	99	81.948	ENSPNAG00000030046	rbm17	99	82.185	Pygocentrus_nattereri
ENSGACG00000019174	rbm17	99	80.685	ENSRNOG00000018767	Rbm17	99	80.685	Rattus_norvegicus
ENSGACG00000019174	rbm17	99	81.034	ENSRBIG00000043727	RBM17	94	87.179	Rhinopithecus_bieti
ENSGACG00000019174	rbm17	99	81.034	ENSRROG00000044142	RBM17	94	87.179	Rhinopithecus_roxellana
ENSGACG00000019174	rbm17	99	72.167	ENSSBOG00000023653	-	99	72.167	Saimiri_boliviensis_boliviensis
ENSGACG00000019174	rbm17	99	81.281	ENSSBOG00000031661	-	97	83.333	Saimiri_boliviensis_boliviensis
ENSGACG00000019174	rbm17	99	81.281	ENSSHAG00000012480	-	99	81.281	Sarcophilus_harrisii
ENSGACG00000019174	rbm17	99	80.882	ENSSFOG00015009892	rbm17	99	81.373	Scleropages_formosus
ENSGACG00000019174	rbm17	99	86.574	ENSSMAG00000012368	rbm17	99	86.574	Scophthalmus_maximus
ENSGACG00000019174	rbm17	99	90.754	ENSSDUG00000015015	rbm17	99	90.754	Seriola_dumerili
ENSGACG00000019174	rbm17	99	90.754	ENSSLDG00000014486	rbm17	99	90.754	Seriola_lalandi_dorsalis
ENSGACG00000019174	rbm17	99	82.020	ENSSPUG00000001036	RBM17	99	81.818	Sphenodon_punctatus
ENSGACG00000019174	rbm17	99	93.797	ENSSPAG00000002338	rbm17	99	93.797	Stegastes_partitus
ENSGACG00000019174	rbm17	99	81.034	ENSSSCG00000011134	RBM17	99	81.034	Sus_scrofa
ENSGACG00000019174	rbm17	99	80.929	ENSTGUG00000002013	RBM17	99	80.929	Taeniopygia_guttata
ENSGACG00000019174	rbm17	99	89.330	ENSTRUG00000010698	rbm17	99	89.330	Takifugu_rubripes
ENSGACG00000019174	rbm17	99	88.642	ENSTNIG00000006892	rbm17	99	88.642	Tetraodon_nigroviridis
ENSGACG00000019174	rbm17	99	61.881	ENSTBEG00000014686	RBM17	99	63.793	Tupaia_belangeri
ENSGACG00000019174	rbm17	90	80.274	ENSTTRG00000001344	RBM17	99	80.274	Tursiops_truncatus
ENSGACG00000019174	rbm17	99	76.675	ENSUAMG00000009499	RBM17	99	79.156	Ursus_americanus
ENSGACG00000019174	rbm17	99	81.281	ENSUMAG00000012237	RBM17	99	81.281	Ursus_maritimus
ENSGACG00000019174	rbm17	99	70.443	ENSVPAG00000005497	RBM17	99	70.443	Vicugna_pacos
ENSGACG00000019174	rbm17	99	76.675	ENSVVUG00000006780	RBM17	99	78.908	Vulpes_vulpes
ENSGACG00000019174	rbm17	99	79.455	ENSXETG00000018123	rbm17	100	79.455	Xenopus_tropicalis
ENSGACG00000019174	rbm17	99	89.801	ENSXMAG00000008674	rbm17	99	89.801	Xiphophorus_maculatus