EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019275 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 23483 bases
Position: chrgroupVII:3109900-3133382
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025482	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025532	-	5781	-	ENSGACP00000025482	1926 (aa)	-	G3Q6H2

Gene Model

Click here to download ENSGACG00000019275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019275	chd3	54	70.745	ENSGACG00000010099	-	96	70.626
ENSGACG00000019275	chd3	91	64.866	ENSGACG00000018705	chd4a	99	63.847
ENSGACG00000019275	chd3	56	68.327	ENSGACG00000004389	chd5	75	76.398

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019275	chd3	100	70.997	ENSG00000170004	CHD3	97	70.892	Homo_sapiens
ENSGACG00000019275	chd3	81	92.147	ENSAPOG00000005614	chd3	96	84.698	Acanthochromis_polyacanthus
ENSGACG00000019275	chd3	71	76.291	ENSAMEG00000003025	-	100	76.073	Ailuropoda_melanoleuca
ENSGACG00000019275	chd3	83	92.973	ENSACIG00000019671	chd3	99	92.973	Amphilophus_citrinellus
ENSGACG00000019275	chd3	99	82.669	ENSAOCG00000023784	chd3	97	92.553	Amphiprion_ocellaris
ENSGACG00000019275	chd3	99	82.570	ENSAPEG00000006341	chd3	96	83.457	Amphiprion_percula
ENSGACG00000019275	chd3	99	81.929	ENSATEG00000000848	chd3	95	90.957	Anabas_testudineus
ENSGACG00000019275	chd3	99	71.870	ENSACAG00000004276	CHD3	94	71.964	Anolis_carolinensis
ENSGACG00000019275	chd3	96	72.517	ENSANAG00000034323	CHD3	99	72.254	Aotus_nancymaae
ENSGACG00000019275	chd3	95	91.195	ENSACLG00000009222	chd3	99	91.195	Astatotilapia_calliptera
ENSGACG00000019275	chd3	100	71.026	ENSBTAG00000014377	CHD3	96	70.949	Bos_taurus
ENSGACG00000019275	chd3	100	70.896	ENSCJAG00000014766	CHD3	97	70.791	Callithrix_jacchus
ENSGACG00000019275	chd3	100	70.538	ENSCAFG00000016859	CHD3	97	70.696	Canis_familiaris
ENSGACG00000019275	chd3	96	71.996	ENSCAFG00020007422	CHD3	99	72.097	Canis_lupus_dingo
ENSGACG00000019275	chd3	100	71.012	ENSCHIG00000016737	CHD3	98	70.755	Capra_hircus
ENSGACG00000019275	chd3	100	70.745	ENSTSYG00000035658	CHD3	99	70.134	Carlito_syrichta
ENSGACG00000019275	chd3	100	68.408	ENSCAPG00000014864	CHD3	97	68.544	Cavia_aperea
ENSGACG00000019275	chd3	100	70.668	ENSCPOG00000022653	CHD3	97	70.675	Cavia_porcellus
ENSGACG00000019275	chd3	100	71.047	ENSCCAG00000034792	CHD3	97	70.943	Cebus_capucinus
ENSGACG00000019275	chd3	100	70.947	ENSCATG00000041717	CHD3	97	70.842	Cercocebus_atys
ENSGACG00000019275	chd3	100	70.896	ENSCLAG00000010523	CHD3	99	70.690	Chinchilla_lanigera
ENSGACG00000019275	chd3	100	70.997	ENSCSAG00000011122	CHD3	98	70.487	Chlorocebus_sabaeus
ENSGACG00000019275	chd3	91	71.102	ENSCPBG00000011966	CHD3	99	73.832	Chrysemys_picta_bellii
ENSGACG00000019275	chd3	100	70.896	ENSCANG00000037641	CHD3	99	69.761	Colobus_angolensis_palliatus
ENSGACG00000019275	chd3	90	73.997	ENSCGRG00001011306	Chd3	99	70.354	Cricetulus_griseus_chok1gshd
ENSGACG00000019275	chd3	100	68.343	ENSCGRG00000007878	Chd3	97	68.135	Cricetulus_griseus_crigri
ENSGACG00000019275	chd3	92	87.500	ENSCSEG00000004489	chd3	100	87.500	Cynoglossus_semilaevis
ENSGACG00000019275	chd3	88	87.645	ENSCVAG00000007293	chd3	95	90.650	Cyprinodon_variegatus
ENSGACG00000019275	chd3	93	87.342	ENSDARG00000021405	chd3	99	87.342	Danio_rerio
ENSGACG00000019275	chd3	91	73.978	ENSDNOG00000047846	CHD3	90	73.188	Dasypus_novemcinctus
ENSGACG00000019275	chd3	100	70.982	ENSDORG00000010713	Chd3	99	70.979	Dipodomys_ordii
ENSGACG00000019275	chd3	98	67.128	ENSETEG00000017733	CHD3	99	66.942	Echinops_telfairi
ENSGACG00000019275	chd3	77	66.645	ENSEBUG00000008310	chd3	99	66.288	Eptatretus_burgeri
ENSGACG00000019275	chd3	94	72.571	ENSEASG00005019360	CHD3	99	72.195	Equus_asinus_asinus
ENSGACG00000019275	chd3	94	72.625	ENSECAG00000010051	CHD3	99	72.249	Equus_caballus
ENSGACG00000019275	chd3	92	64.578	ENSEEUG00000015205	CHD3	86	76.800	Erinaceus_europaeus
ENSGACG00000019275	chd3	79	95.238	ENSELUG00000019499	chd3	99	95.238	Esox_lucius
ENSGACG00000019275	chd3	100	70.831	ENSFCAG00000009629	CHD3	94	70.624	Felis_catus
ENSGACG00000019275	chd3	97	72.176	ENSFDAG00000008220	CHD3	97	70.433	Fukomys_damarensis
ENSGACG00000019275	chd3	92	78.693	ENSGMOG00000013599	chd3	93	79.033	Gadus_morhua
ENSGACG00000019275	chd3	59	77.703	ENSGAFG00000004055	chd3	99	79.574	Gambusia_affinis
ENSGACG00000019275	chd3	78	74.079	ENSGAGG00000013164	CHD3	97	74.716	Gopherus_agassizii
ENSGACG00000019275	chd3	100	70.997	ENSGGOG00000013496	CHD3	99	69.761	Gorilla_gorilla
ENSGACG00000019275	chd3	100	70.911	ENSHGLG00000012017	CHD3	98	70.740	Heterocephalus_glaber_female
ENSGACG00000019275	chd3	89	65.280	ENSHGLG00100013902	CHD3	99	65.401	Heterocephalus_glaber_male
ENSGACG00000019275	chd3	96	78.812	ENSHCOG00000010170	chd3	96	79.460	Hippocampus_comes
ENSGACG00000019275	chd3	87	77.890	ENSIPUG00000003271	chd3	95	78.127	Ictalurus_punctatus
ENSGACG00000019275	chd3	100	70.875	ENSSTOG00000025907	CHD3	99	70.547	Ictidomys_tridecemlineatus
ENSGACG00000019275	chd3	100	70.934	ENSJJAG00000017633	Chd3	99	70.627	Jaculus_jaculus
ENSGACG00000019275	chd3	96	88.644	ENSKMAG00000019292	chd3	95	95.567	Kryptolebias_marmoratus
ENSGACG00000019275	chd3	89	91.600	ENSLBEG00000028485	chd3	89	93.089	Labrus_bergylta
ENSGACG00000019275	chd3	98	67.401	ENSLACG00000008031	CHD3	97	67.850	Latimeria_chalumnae
ENSGACG00000019275	chd3	99	72.906	ENSLOCG00000013965	chd3	96	74.613	Lepisosteus_oculatus
ENSGACG00000019275	chd3	95	75.810	ENSLAFG00000000572	CHD3	91	76.977	Loxodonta_africana
ENSGACG00000019275	chd3	100	70.947	ENSMFAG00000020113	CHD3	99	70.623	Macaca_fascicularis
ENSGACG00000019275	chd3	100	69.618	ENSMMUG00000022221	CHD3	97	69.188	Macaca_mulatta
ENSGACG00000019275	chd3	100	70.896	ENSMNEG00000001728	CHD3	99	71.697	Macaca_nemestrina
ENSGACG00000019275	chd3	100	70.947	ENSMLEG00000032249	CHD3	97	70.842	Mandrillus_leucophaeus
ENSGACG00000019275	chd3	87	80.334	ENSMAMG00000000564	chd3	95	92.021	Mastacembelus_armatus
ENSGACG00000019275	chd3	90	73.844	ENSMAUG00000013873	Chd3	99	70.333	Mesocricetus_auratus
ENSGACG00000019275	chd3	100	70.947	ENSMICG00000008741	CHD3	97	69.536	Microcebus_murinus
ENSGACG00000019275	chd3	90	74.295	ENSMOCG00000004848	Chd3	99	70.692	Microtus_ochrogaster
ENSGACG00000019275	chd3	97	81.432	ENSMMOG00000012699	chd3	97	86.190	Mola_mola
ENSGACG00000019275	chd3	94	71.178	ENSMODG00000007509	CHD3	99	71.983	Monodelphis_domestica
ENSGACG00000019275	chd3	90	74.095	MGP_CAROLIEiJ_G0016564	Chd3	99	70.607	Mus_caroli
ENSGACG00000019275	chd3	90	73.854	ENSMUSG00000018474	Chd3	99	70.466	Mus_musculus
ENSGACG00000019275	chd3	100	70.367	MGP_PahariEiJ_G0017695	Chd3	99	70.749	Mus_pahari
ENSGACG00000019275	chd3	90	73.911	MGP_SPRETEiJ_G0017400	Chd3	99	70.518	Mus_spretus
ENSGACG00000019275	chd3	89	74.541	ENSMPUG00000008861	CHD3	99	74.168	Mustela_putorius_furo
ENSGACG00000019275	chd3	100	70.691	ENSMLUG00000014643	-	97	70.395	Myotis_lucifugus
ENSGACG00000019275	chd3	100	70.621	ENSNGAG00000000773	Chd3	97	70.627	Nannospalax_galili
ENSGACG00000019275	chd3	87	78.744	ENSNBRG00000000636	chd3	97	79.825	Neolamprologus_brichardi
ENSGACG00000019275	chd3	90	84.082	ENSNLEG00000009770	CHD3	99	68.948	Nomascus_leucogenys
ENSGACG00000019275	chd3	83	79.677	ENSMEUG00000005852	CHD3	85	79.677	Notamacropus_eugenii
ENSGACG00000019275	chd3	96	71.714	ENSOPRG00000011069	CHD3	99	71.451	Ochotona_princeps
ENSGACG00000019275	chd3	100	70.724	ENSODEG00000017785	CHD3	98	70.669	Octodon_degus
ENSGACG00000019275	chd3	97	81.326	ENSONIG00000009292	chd3	99	83.273	Oreochromis_niloticus
ENSGACG00000019275	chd3	100	68.312	ENSOCUG00000029299	CHD3	99	68.424	Oryctolagus_cuniculus
ENSGACG00000019275	chd3	83	74.180	ENSORLG00000007107	chd3	95	73.990	Oryzias_latipes
ENSGACG00000019275	chd3	52	87.542	ENSORLG00020008387	chd3	88	88.330	Oryzias_latipes_hni
ENSGACG00000019275	chd3	71	84.240	ENSOMEG00000013691	chd3	99	81.839	Oryzias_melastigma
ENSGACG00000019275	chd3	100	70.796	ENSOGAG00000003216	CHD3	98	70.690	Otolemur_garnettii
ENSGACG00000019275	chd3	100	71.138	ENSOARG00000017855	CHD3	97	70.030	Ovis_aries
ENSGACG00000019275	chd3	100	69.756	ENSPPAG00000032886	CHD3	99	69.687	Pan_paniscus
ENSGACG00000019275	chd3	100	70.882	ENSPPRG00000000626	CHD3	97	70.675	Panthera_pardus
ENSGACG00000019275	chd3	100	70.997	ENSPTRG00000008714	CHD3	99	69.814	Pan_troglodytes
ENSGACG00000019275	chd3	100	70.947	ENSPANG00000023938	CHD3	99	70.623	Papio_anubis
ENSGACG00000019275	chd3	95	82.135	ENSPKIG00000006305	chd3	99	81.889	Paramormyrops_kingsleyae
ENSGACG00000019275	chd3	56	78.257	ENSPSIG00000010177	CHD3	97	78.591	Pelodiscus_sinensis
ENSGACG00000019275	chd3	90	74.152	ENSPEMG00000014262	Chd3	98	70.552	Peromyscus_maniculatus_bairdii
ENSGACG00000019275	chd3	85	89.447	ENSPCIG00000005442	CHD3	99	82.520	Phascolarctos_cinereus
ENSGACG00000019275	chd3	97	81.284	ENSPFOG00000012464	chd3	91	81.341	Poecilia_formosa
ENSGACG00000019275	chd3	88	93.145	ENSPLAG00000002887	chd3	93	93.061	Poecilia_latipinna
ENSGACG00000019275	chd3	51	85.894	ENSPMEG00000016725	chd3	92	78.565	Poecilia_mexicana
ENSGACG00000019275	chd3	93	91.071	ENSPREG00000011044	chd3	97	89.078	Poecilia_reticulata
ENSGACG00000019275	chd3	99	68.893	ENSPPYG00000007940	CHD3	98	68.638	Pongo_abelii
ENSGACG00000019275	chd3	96	77.342	ENSPCAG00000004350	CHD3	95	77.124	Procavia_capensis
ENSGACG00000019275	chd3	100	70.926	ENSPCOG00000020952	CHD3	97	70.755	Propithecus_coquereli
ENSGACG00000019275	chd3	83	69.746	ENSPVAG00000016344	CHD3	82	69.459	Pteropus_vampyrus
ENSGACG00000019275	chd3	99	76.021	ENSPNAG00000020393	chd3	98	88.028	Pygocentrus_nattereri
ENSGACG00000019275	chd3	90	73.788	ENSRNOG00000009722	Chd3	99	71.497	Rattus_norvegicus
ENSGACG00000019275	chd3	100	69.426	ENSRBIG00000033562	CHD3	99	70.911	Rhinopithecus_bieti
ENSGACG00000019275	chd3	100	70.831	ENSRROG00000029554	CHD3	99	70.840	Rhinopithecus_roxellana
ENSGACG00000019275	chd3	100	70.997	ENSSBOG00000020719	CHD3	99	71.805	Saimiri_boliviensis_boliviensis
ENSGACG00000019275	chd3	100	70.520	ENSSHAG00000014412	CHD3	99	70.513	Sarcophilus_harrisii
ENSGACG00000019275	chd3	90	81.792	ENSSFOG00015023123	chd3	97	75.670	Scleropages_formosus
ENSGACG00000019275	chd3	94	83.526	ENSSMAG00000006451	chd3	96	93.617	Scophthalmus_maximus
ENSGACG00000019275	chd3	52	88.671	ENSSDUG00000005792	chd3	88	89.905	Seriola_dumerili
ENSGACG00000019275	chd3	97	82.391	ENSSPAG00000013694	chd3	99	93.617	Stegastes_partitus
ENSGACG00000019275	chd3	100	71.083	ENSSSCG00000021363	CHD3	99	71.868	Sus_scrofa
ENSGACG00000019275	chd3	81	78.050	ENSTRUG00000014990	chd3	93	78.602	Takifugu_rubripes
ENSGACG00000019275	chd3	98	82.531	ENSTNIG00000012998	chd3	99	82.454	Tetraodon_nigroviridis
ENSGACG00000019275	chd3	59	89.691	ENSTBEG00000011454	-	66	89.691	Tupaia_belangeri
ENSGACG00000019275	chd3	96	76.422	ENSTTRG00000010295	CHD3	95	75.140	Tursiops_truncatus
ENSGACG00000019275	chd3	94	71.551	ENSUAMG00000005475	CHD3	99	71.122	Ursus_americanus
ENSGACG00000019275	chd3	55	89.130	ENSVPAG00000010794	-	61	90.741	Vicugna_pacos
ENSGACG00000019275	chd3	96	71.996	ENSVVUG00000028011	CHD3	99	71.960	Vulpes_vulpes
ENSGACG00000019275	chd3	99	66.599	ENSXETG00000012991	chd3	95	66.131	Xenopus_tropicalis
ENSGACG00000019275	chd3	54	87.122	ENSXCOG00000000809	chd3	97	88.354	Xiphophorus_couchianus
ENSGACG00000019275	chd3	80	90.761	ENSXMAG00000016035	chd3	99	90.761	Xiphophorus_maculatus