EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019361 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7497 bases
Position: chrgroupVII:4236488-4243984
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	1	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	2	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	3	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	4	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	5	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	6	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	7	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	8	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	9	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	10	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	11	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	12	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	13	14
ENSGACP00000025587	KH_1	PF00013.29	8.8e-182	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025637	-	3786	-	ENSGACP00000025587	1261 (aa)	-	G3Q6S7

Gene Model

Click here to download ENSGACG00000019361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019361	hdlbpb	100	68.574	ENSGACG00000004648	hdlbpa	99	68.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019361	hdlbpb	100	93.370	ENSAPOG00000006904	hdlbpb	99	93.133	Acanthochromis_polyacanthus
ENSGACG00000019361	hdlbpb	100	87.814	ENSACIG00000016154	hdlbpb	99	87.814	Amphilophus_citrinellus
ENSGACG00000019361	hdlbpb	100	93.844	ENSAOCG00000004083	hdlbpb	99	93.607	Amphiprion_ocellaris
ENSGACG00000019361	hdlbpb	100	93.765	ENSAPEG00000012270	hdlbpb	99	93.528	Amphiprion_percula
ENSGACG00000019361	hdlbpb	100	92.502	ENSATEG00000019877	hdlbpb	99	92.265	Anabas_testudineus
ENSGACG00000019361	hdlbpb	100	79.242	ENSACAG00000003606	-	99	79.242	Anolis_carolinensis
ENSGACG00000019361	hdlbpb	100	92.265	ENSACLG00000006618	hdlbpb	99	92.265	Astatotilapia_calliptera
ENSGACG00000019361	hdlbpb	100	75.591	ENSAMXG00000019946	hdlbpb	99	75.512	Astyanax_mexicanus
ENSGACG00000019361	hdlbpb	100	92.022	ENSCSEG00000000955	hdlbpb	99	93.540	Cynoglossus_semilaevis
ENSGACG00000019361	hdlbpb	100	91.081	ENSCVAG00000005345	hdlbpb	99	91.081	Cyprinodon_variegatus
ENSGACG00000019361	hdlbpb	100	83.175	ENSDARG00000061864	hdlbpb	99	83.175	Danio_rerio
ENSGACG00000019361	hdlbpb	92	67.468	ENSEBUG00000005304	hdlbpb	95	67.734	Eptatretus_burgeri
ENSGACG00000019361	hdlbpb	100	75.943	ENSELUG00000019925	hdlbpb	99	75.943	Esox_lucius
ENSGACG00000019361	hdlbpb	87	33.108	ENSFHEG00000001701	hdlbpb	99	86.740	Fundulus_heteroclitus
ENSGACG00000019361	hdlbpb	95	88.871	ENSGMOG00000004522	hdlbpb	78	87.917	Gadus_morhua
ENSGACG00000019361	hdlbpb	100	91.792	ENSGAFG00000005278	hdlbpb	99	91.555	Gambusia_affinis
ENSGACG00000019361	hdlbpb	100	92.107	ENSHBUG00000018434	hdlbpb	99	92.107	Haplochromis_burtoni
ENSGACG00000019361	hdlbpb	100	83.360	ENSIPUG00000003291	HDLBP	100	83.261	Ictalurus_punctatus
ENSGACG00000019361	hdlbpb	100	92.186	ENSKMAG00000016562	hdlbpb	99	91.949	Kryptolebias_marmoratus
ENSGACG00000019361	hdlbpb	100	92.976	ENSLBEG00000027855	hdlbpb	99	92.739	Labrus_bergylta
ENSGACG00000019361	hdlbpb	100	82.434	ENSLACG00000007661	hdlbpb	90	82.319	Latimeria_chalumnae
ENSGACG00000019361	hdlbpb	100	80.268	ENSLOCG00000013909	hdlbpb	99	80.268	Lepisosteus_oculatus
ENSGACG00000019361	hdlbpb	100	92.818	ENSMAMG00000003035	hdlbpb	99	92.581	Mastacembelus_armatus
ENSGACG00000019361	hdlbpb	100	92.265	ENSMZEG00005021465	hdlbpb	99	92.265	Maylandia_zebra
ENSGACG00000019361	hdlbpb	100	91.548	ENSMMOG00000012525	hdlbpb	99	91.548	Mola_mola
ENSGACG00000019361	hdlbpb	100	90.845	ENSMALG00000008938	hdlbpb	99	90.608	Monopterus_albus
ENSGACG00000019361	hdlbpb	100	92.186	ENSNBRG00000002236	hdlbpb	99	92.186	Neolamprologus_brichardi
ENSGACG00000019361	hdlbpb	100	91.871	ENSONIG00000009211	hdlbpb	100	91.654	Oreochromis_niloticus
ENSGACG00000019361	hdlbpb	100	91.232	ENSORLG00000006581	hdlbpb	99	91.232	Oryzias_latipes
ENSGACG00000019361	hdlbpb	100	91.390	ENSORLG00020010012	hdlbpb	99	91.390	Oryzias_latipes_hni
ENSGACG00000019361	hdlbpb	100	91.548	ENSORLG00015006863	hdlbpb	99	91.548	Oryzias_latipes_hsok
ENSGACG00000019361	hdlbpb	100	91.627	ENSOMEG00000011131	hdlbpb	99	91.627	Oryzias_melastigma
ENSGACG00000019361	hdlbpb	100	86.256	ENSPKIG00000005966	hdlbpb	99	86.335	Paramormyrops_kingsleyae
ENSGACG00000019361	hdlbpb	93	85.556	ENSPMGG00000019853	hdlbpb	99	85.556	Periophthalmus_magnuspinnatus
ENSGACG00000019361	hdlbpb	93	63.000	ENSPMAG00000000249	-	99	63.141	Petromyzon_marinus
ENSGACG00000019361	hdlbpb	94	72.588	ENSPMAG00000002131	hdlbpb	100	72.588	Petromyzon_marinus
ENSGACG00000019361	hdlbpb	100	91.179	ENSPFOG00000008755	hdlbpb	99	90.788	Poecilia_formosa
ENSGACG00000019361	hdlbpb	100	92.028	ENSPLAG00000007055	hdlbpb	99	91.792	Poecilia_latipinna
ENSGACG00000019361	hdlbpb	100	91.949	ENSPMEG00000001952	hdlbpb	99	91.713	Poecilia_mexicana
ENSGACG00000019361	hdlbpb	100	91.792	ENSPREG00000012848	hdlbpb	99	91.555	Poecilia_reticulata
ENSGACG00000019361	hdlbpb	100	92.028	ENSPNYG00000022467	hdlbpb	99	92.028	Pundamilia_nyererei
ENSGACG00000019361	hdlbpb	100	85.399	ENSPNAG00000011104	hdlbpb	99	85.320	Pygocentrus_nattereri
ENSGACG00000019361	hdlbpb	100	85.387	ENSSFOG00015023199	hdlbpb	99	85.308	Scleropages_formosus
ENSGACG00000019361	hdlbpb	100	91.792	ENSSMAG00000008790	hdlbpb	99	91.792	Scophthalmus_maximus
ENSGACG00000019361	hdlbpb	100	93.291	ENSSDUG00000020694	hdlbpb	99	93.054	Seriola_dumerili
ENSGACG00000019361	hdlbpb	100	92.818	ENSSLDG00000020807	hdlbpb	99	92.581	Seriola_lalandi_dorsalis
ENSGACG00000019361	hdlbpb	100	80.032	ENSSPUG00000018688	-	99	80.032	Sphenodon_punctatus
ENSGACG00000019361	hdlbpb	100	93.765	ENSSPAG00000016969	hdlbpb	99	93.528	Stegastes_partitus
ENSGACG00000019361	hdlbpb	98	88.915	ENSTRUG00000012888	hdlbpb	99	88.678	Takifugu_rubripes
ENSGACG00000019361	hdlbpb	100	90.368	ENSTNIG00000002555	hdlbpb	100	90.055	Tetraodon_nigroviridis
ENSGACG00000019361	hdlbpb	100	65.569	ENSXCOG00000001797	hdlbpb	99	65.569	Xiphophorus_couchianus
ENSGACG00000019361	hdlbpb	100	91.239	ENSXMAG00000015633	hdlbpb	99	91.002	Xiphophorus_maculatus