EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019471 (Gene tree)
Gene ID: -
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 21761 bases
Position: chrgroupVII:4888854-4910614
Accession: ZDB-GENE-161017-145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025740	RRM_1	PF00076.22	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025790	-	939	-	ENSGACP00000025740	192 (aa)	-	G3Q780

Gene Model

Click here to download ENSGACG00000019471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019471	rbpms	90	64.171	ENSGACG00000017472	rbpms2b	100	64.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019471	rbpms	100	76.020	ENSG00000157110	RBPMS	90	89.720	Homo_sapiens
ENSGACG00000019471	rbpms	100	87.629	ENSAPOG00000022304	RBPMS	100	87.629	Acanthochromis_polyacanthus
ENSGACG00000019471	rbpms	84	75.301	ENSAMEG00000001522	RBPMS	76	75.301	Ailuropoda_melanoleuca
ENSGACG00000019471	rbpms	69	87.121	ENSACIG00000011395	RBPMS	70	87.121	Amphilophus_citrinellus
ENSGACG00000019471	rbpms	100	87.629	ENSAOCG00000007731	RBPMS	100	87.629	Amphiprion_ocellaris
ENSGACG00000019471	rbpms	100	87.629	ENSAPEG00000023543	RBPMS	100	87.629	Amphiprion_percula
ENSGACG00000019471	rbpms	100	87.629	ENSATEG00000018184	RBPMS	100	87.629	Anabas_testudineus
ENSGACG00000019471	rbpms	100	75.000	ENSACAG00000003012	RBPMS	100	75.000	Anolis_carolinensis
ENSGACG00000019471	rbpms	100	76.020	ENSANAG00000028150	RBPMS	100	76.020	Aotus_nancymaae
ENSGACG00000019471	rbpms	100	87.629	ENSACLG00000002926	RBPMS	100	87.629	Astatotilapia_calliptera
ENSGACG00000019471	rbpms	99	81.250	ENSAMXG00000033491	rbpms	99	81.250	Astyanax_mexicanus
ENSGACG00000019471	rbpms	100	76.020	ENSBTAG00000033727	RBPMS	81	75.706	Bos_taurus
ENSGACG00000019471	rbpms	100	76.020	ENSCJAG00000012366	RBPMS	100	76.020	Callithrix_jacchus
ENSGACG00000019471	rbpms	90	75.706	ENSCAFG00000006503	RBPMS	81	75.706	Canis_familiaris
ENSGACG00000019471	rbpms	90	75.706	ENSCAFG00020001031	RBPMS	81	75.706	Canis_lupus_dingo
ENSGACG00000019471	rbpms	100	70.558	ENSCHIG00000027156	RBPMS	100	70.558	Capra_hircus
ENSGACG00000019471	rbpms	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSGACG00000019471	rbpms	100	76.020	ENSCPOG00000038597	RBPMS	100	76.020	Cavia_porcellus
ENSGACG00000019471	rbpms	100	76.020	ENSCCAG00000033226	RBPMS	100	76.020	Cebus_capucinus
ENSGACG00000019471	rbpms	100	76.020	ENSCATG00000036486	RBPMS	100	76.020	Cercocebus_atys
ENSGACG00000019471	rbpms	89	78.736	ENSCLAG00000001518	RBPMS	100	78.736	Chinchilla_lanigera
ENSGACG00000019471	rbpms	90	75.706	ENSCSAG00000015838	RBPMS	81	75.706	Chlorocebus_sabaeus
ENSGACG00000019471	rbpms	79	79.221	ENSCHOG00000008745	RBPMS	78	79.221	Choloepus_hoffmanni
ENSGACG00000019471	rbpms	100	73.333	ENSCPBG00000013437	RBPMS	100	73.333	Chrysemys_picta_bellii
ENSGACG00000019471	rbpms	89	78.736	ENSCANG00000034997	RBPMS	100	78.736	Colobus_angolensis_palliatus
ENSGACG00000019471	rbpms	99	73.846	ENSCGRG00001002814	Rbpms	99	74.359	Cricetulus_griseus_chok1gshd
ENSGACG00000019471	rbpms	89	77.143	ENSCGRG00000006095	Rbpms	100	77.714	Cricetulus_griseus_crigri
ENSGACG00000019471	rbpms	100	87.113	ENSCSEG00000002777	rbpms	100	87.113	Cynoglossus_semilaevis
ENSGACG00000019471	rbpms	100	87.629	ENSCVAG00000013975	RBPMS	100	87.629	Cyprinodon_variegatus
ENSGACG00000019471	rbpms	87	66.667	ENSDARG00000099396	rbpms	100	66.667	Danio_rerio
ENSGACG00000019471	rbpms	90	76.136	ENSDNOG00000008126	RBPMS	80	76.136	Dasypus_novemcinctus
ENSGACG00000019471	rbpms	90	76.271	ENSETEG00000017582	RBPMS	81	76.271	Echinops_telfairi
ENSGACG00000019471	rbpms	79	79.221	ENSEASG00005016962	RBPMS	78	79.221	Equus_asinus_asinus
ENSGACG00000019471	rbpms	90	75.141	ENSECAG00000020735	RBPMS	78	79.221	Equus_caballus
ENSGACG00000019471	rbpms	100	84.021	ENSELUG00000009787	rbpms	100	84.021	Esox_lucius
ENSGACG00000019471	rbpms	100	75.510	ENSFCAG00000025639	-	100	75.510	Felis_catus
ENSGACG00000019471	rbpms	88	49.112	ENSFCAG00000022292	-	93	45.596	Felis_catus
ENSGACG00000019471	rbpms	89	78.736	ENSFDAG00000012078	RBPMS	100	78.736	Fukomys_damarensis
ENSGACG00000019471	rbpms	100	87.113	ENSFHEG00000000618	rbpms	100	87.113	Fundulus_heteroclitus
ENSGACG00000019471	rbpms	78	60.000	ENSGMOG00000009646	-	100	60.000	Gadus_morhua
ENSGACG00000019471	rbpms	100	88.144	ENSGAFG00000016566	RBPMS	100	88.144	Gambusia_affinis
ENSGACG00000019471	rbpms	57	89.908	ENSGAGG00000023634	RBPMS	58	77.206	Gopherus_agassizii
ENSGACG00000019471	rbpms	100	87.629	ENSHBUG00000005888	RBPMS	100	87.629	Haplochromis_burtoni
ENSGACG00000019471	rbpms	100	76.020	ENSHGLG00000002303	RBPMS	100	76.020	Heterocephalus_glaber_female
ENSGACG00000019471	rbpms	89	78.736	ENSHGLG00100008787	RBPMS	100	78.736	Heterocephalus_glaber_male
ENSGACG00000019471	rbpms	98	85.340	ENSHCOG00000005774	rbpms	99	85.340	Hippocampus_comes
ENSGACG00000019471	rbpms	97	81.152	ENSIPUG00000012459	RBPMS	99	81.152	Ictalurus_punctatus
ENSGACG00000019471	rbpms	100	75.510	ENSSTOG00000026546	RBPMS	100	75.510	Ictidomys_tridecemlineatus
ENSGACG00000019471	rbpms	99	75.773	ENSJJAG00000014024	Rbpms	99	75.773	Jaculus_jaculus
ENSGACG00000019471	rbpms	89	77.193	ENSKMAG00000006377	RBPMS	88	78.736	Kryptolebias_marmoratus
ENSGACG00000019471	rbpms	100	87.629	ENSLBEG00000027989	RBPMS	100	87.629	Labrus_bergylta
ENSGACG00000019471	rbpms	90	81.714	ENSLOCG00000013199	RBPMS	96	81.714	Lepisosteus_oculatus
ENSGACG00000019471	rbpms	90	76.271	ENSLAFG00000000209	RBPMS	81	76.271	Loxodonta_africana
ENSGACG00000019471	rbpms	100	76.020	ENSMFAG00000036911	RBPMS	100	76.020	Macaca_fascicularis
ENSGACG00000019471	rbpms	100	76.020	ENSMMUG00000000458	RBPMS	100	76.020	Macaca_mulatta
ENSGACG00000019471	rbpms	100	76.020	ENSMNEG00000043805	RBPMS	100	76.020	Macaca_nemestrina
ENSGACG00000019471	rbpms	89	78.736	ENSMLEG00000015635	RBPMS	100	78.736	Mandrillus_leucophaeus
ENSGACG00000019471	rbpms	72	92.086	ENSMAMG00000004604	RBPMS	73	92.086	Mastacembelus_armatus
ENSGACG00000019471	rbpms	100	87.629	ENSMZEG00005000698	RBPMS	100	87.629	Maylandia_zebra
ENSGACG00000019471	rbpms	90	76.000	ENSMGAG00000005088	RBPMS	90	76.000	Meleagris_gallopavo
ENSGACG00000019471	rbpms	99	73.846	ENSMAUG00000018892	Rbpms	99	74.359	Mesocricetus_auratus
ENSGACG00000019471	rbpms	99	75.258	ENSMICG00000001295	RBPMS	100	76.020	Microcebus_murinus
ENSGACG00000019471	rbpms	99	73.846	ENSMOCG00000014009	Rbpms	99	74.359	Microtus_ochrogaster
ENSGACG00000019471	rbpms	82	83.648	ENSMMOG00000012036	RBPMS	67	83.648	Mola_mola
ENSGACG00000019471	rbpms	97	75.661	ENSMODG00000019006	RBPMS	92	74.227	Monodelphis_domestica
ENSGACG00000019471	rbpms	100	86.598	ENSMALG00000003261	RBPMS	100	86.598	Monopterus_albus
ENSGACG00000019471	rbpms	99	73.333	MGP_CAROLIEiJ_G0030970	Rbpms	99	73.846	Mus_caroli
ENSGACG00000019471	rbpms	99	73.333	ENSMUSG00000031586	Rbpms	99	73.846	Mus_musculus
ENSGACG00000019471	rbpms	100	74.112	MGP_PahariEiJ_G0021439	Rbpms	100	74.619	Mus_pahari
ENSGACG00000019471	rbpms	99	73.333	MGP_SPRETEiJ_G0032087	Rbpms	99	73.846	Mus_spretus
ENSGACG00000019471	rbpms	84	75.301	ENSMPUG00000011314	RBPMS	76	75.301	Mustela_putorius_furo
ENSGACG00000019471	rbpms	100	76.020	ENSMLUG00000009391	RBPMS	100	81.013	Myotis_lucifugus
ENSGACG00000019471	rbpms	90	75.706	ENSNGAG00000011141	Rbpms	81	75.706	Nannospalax_galili
ENSGACG00000019471	rbpms	90	87.931	ENSNBRG00000003313	RBPMS	97	87.931	Neolamprologus_brichardi
ENSGACG00000019471	rbpms	99	75.773	ENSNLEG00000036183	-	99	75.773	Nomascus_leucogenys
ENSGACG00000019471	rbpms	68	84.091	ENSOPRG00000013151	RBPMS	60	84.091	Ochotona_princeps
ENSGACG00000019471	rbpms	100	76.020	ENSODEG00000006700	RBPMS	100	76.020	Octodon_degus
ENSGACG00000019471	rbpms	90	87.931	ENSONIG00000007546	RBPMS	100	87.931	Oreochromis_niloticus
ENSGACG00000019471	rbpms	90	75.706	ENSOCUG00000008572	RBPMS	81	75.706	Oryctolagus_cuniculus
ENSGACG00000019471	rbpms	100	86.598	ENSORLG00000004135	-	100	86.598	Oryzias_latipes
ENSGACG00000019471	rbpms	100	86.598	ENSORLG00020016179	RBPMS	100	86.598	Oryzias_latipes_hni
ENSGACG00000019471	rbpms	100	86.598	ENSORLG00015013770	RBPMS	100	86.598	Oryzias_latipes_hsok
ENSGACG00000019471	rbpms	100	87.113	ENSOMEG00000005044	RBPMS	100	87.113	Oryzias_melastigma
ENSGACG00000019471	rbpms	92	74.586	ENSOGAG00000030298	RBPMS	81	74.586	Otolemur_garnettii
ENSGACG00000019471	rbpms	66	83.594	ENSOARG00000010366	RBPMS	89	83.594	Ovis_aries
ENSGACG00000019471	rbpms	89	78.736	ENSPPAG00000033108	RBPMS	100	78.736	Pan_paniscus
ENSGACG00000019471	rbpms	100	75.510	ENSPPRG00000004836	RBPMS	100	75.510	Panthera_pardus
ENSGACG00000019471	rbpms	89	78.736	ENSPTIG00000015964	RBPMS	89	78.736	Panthera_tigris_altaica
ENSGACG00000019471	rbpms	100	76.020	ENSPTRG00000020135	RBPMS	100	76.020	Pan_troglodytes
ENSGACG00000019471	rbpms	100	76.020	ENSPANG00000008143	RBPMS	100	76.020	Papio_anubis
ENSGACG00000019471	rbpms	100	79.897	ENSPKIG00000000535	-	100	79.897	Paramormyrops_kingsleyae
ENSGACG00000019471	rbpms	97	79.787	ENSPKIG00000004836	rbpms	99	79.787	Paramormyrops_kingsleyae
ENSGACG00000019471	rbpms	89	77.011	ENSPSIG00000006136	RBPMS	99	77.011	Pelodiscus_sinensis
ENSGACG00000019471	rbpms	81	84.810	ENSPMGG00000018012	RBPMS	74	84.810	Periophthalmus_magnuspinnatus
ENSGACG00000019471	rbpms	99	73.469	ENSPEMG00000021130	Rbpms	99	74.490	Peromyscus_maniculatus_bairdii
ENSGACG00000019471	rbpms	90	77.841	ENSPCIG00000019298	-	71	73.684	Phascolarctos_cinereus
ENSGACG00000019471	rbpms	100	88.144	ENSPFOG00000017158	RBPMS	100	88.144	Poecilia_formosa
ENSGACG00000019471	rbpms	100	88.144	ENSPLAG00000010767	RBPMS	100	88.144	Poecilia_latipinna
ENSGACG00000019471	rbpms	100	88.144	ENSPMEG00000009788	RBPMS	100	88.144	Poecilia_mexicana
ENSGACG00000019471	rbpms	100	88.144	ENSPREG00000016959	RBPMS	100	88.144	Poecilia_reticulata
ENSGACG00000019471	rbpms	90	75.706	ENSPPYG00000018487	RBPMS	81	81.752	Pongo_abelii
ENSGACG00000019471	rbpms	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSGACG00000019471	rbpms	68	72.388	ENSPCOG00000015948	RBPMS	75	73.846	Propithecus_coquereli
ENSGACG00000019471	rbpms	90	75.568	ENSPVAG00000001661	RBPMS	80	75.568	Pteropus_vampyrus
ENSGACG00000019471	rbpms	100	87.629	ENSPNYG00000001172	RBPMS	100	87.629	Pundamilia_nyererei
ENSGACG00000019471	rbpms	99	84.375	ENSPNAG00000029160	RBPMS	99	84.375	Pygocentrus_nattereri
ENSGACG00000019471	rbpms	92	72.527	ENSRNOG00000013328	Rbpms	88	73.077	Rattus_norvegicus
ENSGACG00000019471	rbpms	89	78.736	ENSRBIG00000038218	RBPMS	100	78.736	Rhinopithecus_bieti
ENSGACG00000019471	rbpms	100	76.020	ENSRROG00000042518	RBPMS	100	76.020	Rhinopithecus_roxellana
ENSGACG00000019471	rbpms	99	75.258	ENSSBOG00000026670	RBPMS	99	75.258	Saimiri_boliviensis_boliviensis
ENSGACG00000019471	rbpms	90	78.857	ENSSHAG00000010114	RBPMS	90	78.857	Sarcophilus_harrisii
ENSGACG00000019471	rbpms	90	78.736	ENSSFOG00015017481	-	99	77.128	Scleropages_formosus
ENSGACG00000019471	rbpms	100	80.412	ENSSFOG00015000417	rbpms	100	80.412	Scleropages_formosus
ENSGACG00000019471	rbpms	100	86.082	ENSSMAG00000010871	rbpms	100	86.082	Scophthalmus_maximus
ENSGACG00000019471	rbpms	100	88.144	ENSSDUG00000010894	RBPMS	100	88.144	Seriola_dumerili
ENSGACG00000019471	rbpms	100	88.144	ENSSLDG00000012916	RBPMS	100	88.144	Seriola_lalandi_dorsalis
ENSGACG00000019471	rbpms	90	71.751	ENSSARG00000000274	RBPMS	81	71.751	Sorex_araneus
ENSGACG00000019471	rbpms	94	74.317	ENSSPUG00000017525	RBPMS	70	74.317	Sphenodon_punctatus
ENSGACG00000019471	rbpms	89	77.778	ENSSPAG00000004777	rbpms	96	80.864	Stegastes_partitus
ENSGACG00000019471	rbpms	100	75.510	ENSSSCG00000015846	RBPMS	100	75.510	Sus_scrofa
ENSGACG00000019471	rbpms	97	73.158	ENSTGUG00000001776	RBPMS	100	73.158	Taeniopygia_guttata
ENSGACG00000019471	rbpms	100	88.144	ENSTRUG00000000041	RBPMS	100	88.144	Takifugu_rubripes
ENSGACG00000019471	rbpms	90	75.000	ENSTTRG00000012451	RBPMS	81	75.000	Tursiops_truncatus
ENSGACG00000019471	rbpms	60	86.207	ENSUAMG00000026353	RBPMS	76	86.207	Ursus_americanus
ENSGACG00000019471	rbpms	84	76.970	ENSUMAG00000007347	RBPMS	76	78.205	Ursus_maritimus
ENSGACG00000019471	rbpms	79	79.221	ENSVPAG00000010991	RBPMS	78	79.221	Vicugna_pacos
ENSGACG00000019471	rbpms	100	76.020	ENSVVUG00000019770	RBPMS	100	76.020	Vulpes_vulpes
ENSGACG00000019471	rbpms	89	78.736	ENSXETG00000011290	rbpms	100	78.736	Xenopus_tropicalis
ENSGACG00000019471	rbpms	90	81.609	ENSXCOG00000002436	RBPMS	90	81.609	Xiphophorus_couchianus
ENSGACG00000019471	rbpms	100	88.144	ENSXMAG00000027637	RBPMS	100	88.144	Xiphophorus_maculatus