EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019501 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease (deadenylation nuclease)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6498 bases
Position: chrgroupIX:17933071-17939568
Accession: ZDB-GENE-040426-880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025780	RNA_bind	PF08675.11	6.2e-33	1	1
ENSGACP00000025780	CAF1	PF04857.20	1.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025830	-	2616	-	ENSGACP00000025780	623 (aa)	-	G3Q7C0

Gene Model

Click here to download ENSGACG00000019501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019501's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019501	parn	100	68.567	ENSG00000140694	PARN	99	69.338	Homo_sapiens
ENSGACG00000019501	parn	100	68.111	ENSAMEG00000011208	PARN	100	68.111	Ailuropoda_melanoleuca
ENSGACG00000019501	parn	89	86.257	ENSACIG00000000619	parn	86	86.618	Amphilophus_citrinellus
ENSGACG00000019501	parn	99	83.117	ENSAOCG00000003465	parn	100	76.149	Amphiprion_ocellaris
ENSGACG00000019501	parn	90	80.462	ENSAPEG00000010661	parn	100	80.462	Amphiprion_percula
ENSGACG00000019501	parn	100	76.046	ENSATEG00000004661	parn	100	76.912	Anabas_testudineus
ENSGACG00000019501	parn	99	67.500	ENSAPLG00000013914	PARN	83	77.170	Anas_platyrhynchos
ENSGACG00000019501	parn	86	77.654	ENSACAG00000004973	PARN	84	76.130	Anolis_carolinensis
ENSGACG00000019501	parn	100	68.934	ENSANAG00000031516	PARN	100	68.315	Aotus_nancymaae
ENSGACG00000019501	parn	100	77.358	ENSACLG00000004742	parn	100	77.068	Astatotilapia_calliptera
ENSGACG00000019501	parn	100	72.068	ENSAMXG00000012390	parn	100	69.820	Astyanax_mexicanus
ENSGACG00000019501	parn	100	65.719	ENSBTAG00000018097	PARN	100	67.581	Bos_taurus
ENSGACG00000019501	parn	100	69.183	ENSCJAG00000015866	PARN	91	74.576	Callithrix_jacchus
ENSGACG00000019501	parn	100	67.391	ENSCAFG00000018795	PARN	100	67.391	Canis_familiaris
ENSGACG00000019501	parn	100	67.702	ENSCAFG00020024126	PARN	100	67.702	Canis_lupus_dingo
ENSGACG00000019501	parn	100	67.547	ENSCHIG00000018143	PARN	100	67.547	Capra_hircus
ENSGACG00000019501	parn	75	51.351	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSGACG00000019501	parn	100	68.062	ENSCPOG00000002263	PARN	83	76.119	Cavia_porcellus
ENSGACG00000019501	parn	100	68.875	ENSCCAG00000030367	PARN	91	74.576	Cebus_capucinus
ENSGACG00000019501	parn	55	33.793	ENSCATG00000033196	PNLDC1	72	33.793	Cercocebus_atys
ENSGACG00000019501	parn	86	77.239	ENSCATG00000041368	PARN	95	77.239	Cercocebus_atys
ENSGACG00000019501	parn	100	68.992	ENSCLAG00000015406	PARN	100	64.818	Chinchilla_lanigera
ENSGACG00000019501	parn	100	68.673	ENSCSAG00000008142	PARN	100	68.527	Chlorocebus_sabaeus
ENSGACG00000019501	parn	99	53.616	ENSCHOG00000007014	PARN	100	53.145	Choloepus_hoffmanni
ENSGACG00000019501	parn	77	76.434	ENSCPBG00000006609	PARN	83	76.434	Chrysemys_picta_bellii
ENSGACG00000019501	parn	82	41.948	ENSCING00000010142	-	99	41.948	Ciona_intestinalis
ENSGACG00000019501	parn	100	58.939	ENSCANG00000028849	-	76	74.576	Colobus_angolensis_palliatus
ENSGACG00000019501	parn	100	67.919	ENSCGRG00001012096	Parn	100	67.919	Cricetulus_griseus_chok1gshd
ENSGACG00000019501	parn	100	67.919	ENSCGRG00000004939	Parn	100	67.919	Cricetulus_griseus_crigri
ENSGACG00000019501	parn	100	73.199	ENSCSEG00000002064	parn	100	75.455	Cynoglossus_semilaevis
ENSGACG00000019501	parn	100	74.165	ENSCVAG00000014848	parn	100	73.149	Cyprinodon_variegatus
ENSGACG00000019501	parn	100	67.638	ENSDARG00000102634	parn	100	66.667	Danio_rerio
ENSGACG00000019501	parn	100	68.429	ENSDNOG00000000833	PARN	94	76.866	Dasypus_novemcinctus
ENSGACG00000019501	parn	52	30.240	ENSDORG00000011517	Pnldc1	97	30.240	Dipodomys_ordii
ENSGACG00000019501	parn	67	73.864	ENSETEG00000014828	-	69	73.864	Echinops_telfairi
ENSGACG00000019501	parn	54	51.170	ENSEBUG00000007052	PARN	70	67.257	Eptatretus_burgeri
ENSGACG00000019501	parn	100	68.896	ENSEASG00005011400	PARN	100	68.429	Equus_asinus_asinus
ENSGACG00000019501	parn	100	69.051	ENSECAG00000017792	PARN	100	68.585	Equus_caballus
ENSGACG00000019501	parn	86	62.613	ENSEEUG00000010370	PARN	86	62.613	Erinaceus_europaeus
ENSGACG00000019501	parn	96	77.592	ENSELUG00000013139	parn	76	79.688	Esox_lucius
ENSGACG00000019501	parn	100	68.168	ENSFCAG00000044961	PARN	100	72.881	Felis_catus
ENSGACG00000019501	parn	99	67.344	ENSFALG00000003911	PARN	98	67.762	Ficedula_albicollis
ENSGACG00000019501	parn	100	67.643	ENSFDAG00000009234	PARN	92	71.022	Fukomys_damarensis
ENSGACG00000019501	parn	92	75.986	ENSFHEG00000013738	parn	92	89.831	Fundulus_heteroclitus
ENSGACG00000019501	parn	88	84.545	ENSGMOG00000003231	parn	99	84.545	Gadus_morhua
ENSGACG00000019501	parn	100	68.075	ENSGALG00000003091	PARN	100	68.075	Gallus_gallus
ENSGACG00000019501	parn	100	74.026	ENSGAFG00000011061	parn	84	82.414	Gambusia_affinis
ENSGACG00000019501	parn	86	77.425	ENSGGOG00000025224	PARN	91	74.576	Gorilla_gorilla
ENSGACG00000019501	parn	100	79.585	ENSHBUG00000017906	parn	100	79.266	Haplochromis_burtoni
ENSGACG00000019501	parn	100	67.802	ENSHGLG00000010886	PARN	100	67.337	Heterocephalus_glaber_female
ENSGACG00000019501	parn	100	67.802	ENSHGLG00100014659	PARN	100	67.337	Heterocephalus_glaber_male
ENSGACG00000019501	parn	87	80.331	ENSHCOG00000008683	parn	94	80.331	Hippocampus_comes
ENSGACG00000019501	parn	100	62.330	ENSIPUG00000012401	parn	85	68.761	Ictalurus_punctatus
ENSGACG00000019501	parn	100	68.062	ENSSTOG00000007519	PARN	100	67.752	Ictidomys_tridecemlineatus
ENSGACG00000019501	parn	100	68.346	ENSJJAG00000023049	Parn	100	68.189	Jaculus_jaculus
ENSGACG00000019501	parn	100	75.832	ENSKMAG00000009462	parn	100	75.543	Kryptolebias_marmoratus
ENSGACG00000019501	parn	97	83.333	ENSLBEG00000009167	parn	90	86.482	Labrus_bergylta
ENSGACG00000019501	parn	83	72.084	ENSLACG00000004207	PARN	100	72.877	Latimeria_chalumnae
ENSGACG00000019501	parn	95	75.793	ENSLOCG00000000715	parn	85	76.976	Lepisosteus_oculatus
ENSGACG00000019501	parn	100	69.279	ENSLAFG00000015036	PARN	100	68.809	Loxodonta_africana
ENSGACG00000019501	parn	100	62.906	ENSMFAG00000044852	PARN	100	67.802	Macaca_fascicularis
ENSGACG00000019501	parn	100	68.875	ENSMMUG00000018849	PARN	83	77.612	Macaca_mulatta
ENSGACG00000019501	parn	100	68.875	ENSMNEG00000045108	PARN	83	77.612	Macaca_nemestrina
ENSGACG00000019501	parn	100	68.721	ENSMLEG00000031743	PARN	83	77.425	Mandrillus_leucophaeus
ENSGACG00000019501	parn	100	82.143	ENSMAMG00000006939	parn	95	85.567	Mastacembelus_armatus
ENSGACG00000019501	parn	100	78.309	ENSMZEG00005013590	parn	100	78.150	Maylandia_zebra
ENSGACG00000019501	parn	99	65.884	ENSMGAG00000001004	PARN	99	65.728	Meleagris_gallopavo
ENSGACG00000019501	parn	67	30.769	ENSMAUG00000012298	Pnldc1	85	30.137	Mesocricetus_auratus
ENSGACG00000019501	parn	100	64.043	ENSMAUG00000008025	Parn	100	64.043	Mesocricetus_auratus
ENSGACG00000019501	parn	100	68.896	ENSMICG00000016053	PARN	100	72.881	Microcebus_murinus
ENSGACG00000019501	parn	79	77.126	ENSMOCG00000022211	Parn	100	77.126	Microtus_ochrogaster
ENSGACG00000019501	parn	100	79.327	ENSMMOG00000011333	parn	100	77.883	Mola_mola
ENSGACG00000019501	parn	79	79.074	ENSMODG00000004915	PARN	99	79.074	Monodelphis_domestica
ENSGACG00000019501	parn	100	81.120	ENSMALG00000019426	parn	100	81.120	Monopterus_albus
ENSGACG00000019501	parn	100	67.773	MGP_CAROLIEiJ_G0020466	Parn	92	70.769	Mus_caroli
ENSGACG00000019501	parn	100	67.347	ENSMUSG00000022685	Parn	100	73.171	Mus_musculus
ENSGACG00000019501	parn	100	67.874	MGP_PahariEiJ_G0016172	Parn	100	67.874	Mus_pahari
ENSGACG00000019501	parn	100	67.347	MGP_SPRETEiJ_G0021361	Parn	92	70.289	Mus_spretus
ENSGACG00000019501	parn	100	69.051	ENSMPUG00000014464	PARN	100	68.585	Mustela_putorius_furo
ENSGACG00000019501	parn	79	77.374	ENSMLUG00000005414	PARN	100	77.374	Myotis_lucifugus
ENSGACG00000019501	parn	100	78.045	ENSNBRG00000006805	parn	100	78.365	Neolamprologus_brichardi
ENSGACG00000019501	parn	100	69.136	ENSNLEG00000010241	PARN	91	74.576	Nomascus_leucogenys
ENSGACG00000019501	parn	85	56.061	ENSMEUG00000008178	-	83	56.061	Notamacropus_eugenii
ENSGACG00000019501	parn	99	64.623	ENSOPRG00000012187	PARN	100	63.793	Ochotona_princeps
ENSGACG00000019501	parn	100	63.708	ENSODEG00000001617	PARN	85	69.944	Octodon_degus
ENSGACG00000019501	parn	100	81.481	ENSONIG00000000151	parn	100	81.944	Oreochromis_niloticus
ENSGACG00000019501	parn	58	66.667	ENSOANG00000020155	-	97	67.454	Ornithorhynchus_anatinus
ENSGACG00000019501	parn	99	68.446	ENSOCUG00000000322	PARN	83	76.981	Oryctolagus_cuniculus
ENSGACG00000019501	parn	99	80.488	ENSORLG00020010313	parn	100	74.298	Oryzias_latipes_hni
ENSGACG00000019501	parn	99	80.163	ENSORLG00015000300	parn	100	74.003	Oryzias_latipes_hsok
ENSGACG00000019501	parn	100	73.442	ENSOMEG00000019555	parn	97	75.342	Oryzias_melastigma
ENSGACG00000019501	parn	79	76.815	ENSOGAG00000014626	PARN	100	76.815	Otolemur_garnettii
ENSGACG00000019501	parn	79	77.980	ENSOARG00000007574	PARN	100	77.980	Ovis_aries
ENSGACG00000019501	parn	100	68.567	ENSPPAG00000031438	PARN	91	74.576	Pan_paniscus
ENSGACG00000019501	parn	100	68.168	ENSPPRG00000018583	PARN	100	72.881	Panthera_pardus
ENSGACG00000019501	parn	100	68.168	ENSPTIG00000012135	PARN	100	72.881	Panthera_tigris_altaica
ENSGACG00000019501	parn	100	68.413	ENSPTRG00000007792	PARN	91	74.576	Pan_troglodytes
ENSGACG00000019501	parn	100	67.026	ENSPANG00000020099	PARN	83	75.560	Papio_anubis
ENSGACG00000019501	parn	96	74.958	ENSPKIG00000022807	parn	94	71.476	Paramormyrops_kingsleyae
ENSGACG00000019501	parn	87	75.455	ENSPSIG00000014804	PARN	100	66.496	Pelodiscus_sinensis
ENSGACG00000019501	parn	89	82.130	ENSPMGG00000014431	parn	77	82.310	Periophthalmus_magnuspinnatus
ENSGACG00000019501	parn	100	66.195	ENSPEMG00000018439	Parn	90	70.280	Peromyscus_maniculatus_bairdii
ENSGACG00000019501	parn	86	66.976	ENSPMAG00000003956	parn	99	66.976	Petromyzon_marinus
ENSGACG00000019501	parn	68	70.794	ENSPCIG00000001259	PARN	91	74.576	Phascolarctos_cinereus
ENSGACG00000019501	parn	100	74.530	ENSPFOG00000012823	parn	84	82.872	Poecilia_formosa
ENSGACG00000019501	parn	100	74.674	ENSPLAG00000006395	parn	84	83.045	Poecilia_latipinna
ENSGACG00000019501	parn	100	74.385	ENSPMEG00000007711	parn	100	73.082	Poecilia_mexicana
ENSGACG00000019501	parn	100	74.348	ENSPREG00000000147	parn	100	73.043	Poecilia_reticulata
ENSGACG00000019501	parn	100	67.896	ENSPPYG00000007123	PARN	83	76.766	Pongo_abelii
ENSGACG00000019501	parn	95	60.656	ENSPCAG00000001741	PARN	100	60.820	Procavia_capensis
ENSGACG00000019501	parn	100	66.304	ENSPCOG00000019292	PARN	100	72.881	Propithecus_coquereli
ENSGACG00000019501	parn	99	65.149	ENSPVAG00000002547	PARN	100	65.149	Pteropus_vampyrus
ENSGACG00000019501	parn	100	76.822	ENSPNYG00000006835	parn	100	76.531	Pundamilia_nyererei
ENSGACG00000019501	parn	93	69.919	ENSPNAG00000018905	parn	100	70.081	Pygocentrus_nattereri
ENSGACG00000019501	parn	100	66.462	ENSRNOG00000002912	Parn	96	77.551	Rattus_norvegicus
ENSGACG00000019501	parn	51	62.281	ENSRBIG00000018726	PARN	68	79.476	Rhinopithecus_bieti
ENSGACG00000019501	parn	51	62.281	ENSRROG00000011162	-	68	79.476	Rhinopithecus_roxellana
ENSGACG00000019501	parn	100	67.488	ENSSBOG00000034726	PARN	83	75.746	Saimiri_boliviensis_boliviensis
ENSGACG00000019501	parn	67	77.273	ENSSHAG00000008493	PARN	93	77.273	Sarcophilus_harrisii
ENSGACG00000019501	parn	97	73.934	ENSSFOG00015014165	parn	96	74.138	Scleropages_formosus
ENSGACG00000019501	parn	99	82.143	ENSSMAG00000000685	parn	100	75.714	Scophthalmus_maximus
ENSGACG00000019501	parn	100	77.666	ENSSDUG00000014555	parn	100	77.954	Seriola_dumerili
ENSGACG00000019501	parn	70	79.080	ENSSARG00000014339	PARN	75	79.080	Sorex_araneus
ENSGACG00000019501	parn	100	67.852	ENSSPUG00000007719	PARN	100	67.852	Sphenodon_punctatus
ENSGACG00000019501	parn	100	77.312	ENSSPAG00000007095	parn	100	77.457	Stegastes_partitus
ENSGACG00000019501	parn	86	76.679	ENSSSCG00000007878	PARN	74	76.679	Sus_scrofa
ENSGACG00000019501	parn	99	67.395	ENSTGUG00000004971	PARN	99	67.863	Taeniopygia_guttata
ENSGACG00000019501	parn	100	78.717	ENSTNIG00000008252	parn	100	78.438	Tetraodon_nigroviridis
ENSGACG00000019501	parn	91	58.065	ENSTBEG00000010407	PARN	100	57.725	Tupaia_belangeri
ENSGACG00000019501	parn	99	63.736	ENSTTRG00000002843	PARN	77	77.823	Tursiops_truncatus
ENSGACG00000019501	parn	70	69.794	ENSUAMG00000008283	PARN	94	66.590	Ursus_americanus
ENSGACG00000019501	parn	100	68.012	ENSUMAG00000004527	PARN	100	68.012	Ursus_maritimus
ENSGACG00000019501	parn	91	68.136	ENSVPAG00000008968	PARN	95	68.136	Vicugna_pacos
ENSGACG00000019501	parn	100	67.702	ENSVVUG00000019509	PARN	100	67.702	Vulpes_vulpes
ENSGACG00000019501	parn	100	66.459	ENSXETG00000010994	parn	100	74.717	Xenopus_tropicalis
ENSGACG00000019501	parn	89	80.325	ENSXCOG00000015990	parn	97	77.720	Xiphophorus_couchianus
ENSGACG00000019501	parn	100	73.372	ENSXMAG00000014783	parn	84	82.180	Xiphophorus_maculatus