EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019511 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2338 bases
Position: chrgroupIX:17957923-17960260
Accession: ZDB-GENE-040426-1805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025787	THUMP	PF02926.17	3.5e-18	1	1
ENSGACP00000025789	THUMP	PF02926.17	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025837	-	1644	-	ENSGACP00000025787	325 (aa)	-	G3Q7C7
ENSGACT00000025839	-	1611	-	ENSGACP00000025789	333 (aa)	-	G3Q7C9

Gene Model

Click here to download ENSGACG00000019511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019511	thumpd1	78	60.784	ENSG00000066654	THUMPD1	81	53.390	Homo_sapiens
ENSGACG00000019511	thumpd1	100	76.829	ENSAPOG00000008440	thumpd1	100	76.220	Acanthochromis_polyacanthus
ENSGACG00000019511	thumpd1	96	54.062	ENSAMEG00000006257	THUMPD1	77	58.781	Ailuropoda_melanoleuca
ENSGACG00000019511	thumpd1	88	78.049	ENSACIG00000024395	thumpd1	97	74.462	Amphilophus_citrinellus
ENSGACG00000019511	thumpd1	100	77.204	ENSAOCG00000003509	thumpd1	100	76.596	Amphiprion_ocellaris
ENSGACG00000019511	thumpd1	100	77.508	ENSAPEG00000010515	thumpd1	100	76.900	Amphiprion_percula
ENSGACG00000019511	thumpd1	100	77.676	ENSATEG00000004737	thumpd1	100	77.370	Anabas_testudineus
ENSGACG00000019511	thumpd1	77	61.961	ENSAPLG00000015259	THUMPD1	88	61.961	Anas_platyrhynchos
ENSGACG00000019511	thumpd1	84	56.028	ENSACAG00000009625	-	88	56.383	Anolis_carolinensis
ENSGACG00000019511	thumpd1	58	53.476	ENSACAG00000022881	-	95	53.476	Anolis_carolinensis
ENSGACG00000019511	thumpd1	81	48.148	ENSANAG00000027311	-	75	48.106	Aotus_nancymaae
ENSGACG00000019511	thumpd1	80	47.584	ENSANAG00000027040	-	73	47.584	Aotus_nancymaae
ENSGACG00000019511	thumpd1	80	60.595	ENSANAG00000026882	-	76	60.595	Aotus_nancymaae
ENSGACG00000019511	thumpd1	94	74.593	ENSACLG00000004830	thumpd1	98	72.393	Astatotilapia_calliptera
ENSGACG00000019511	thumpd1	86	60.702	ENSAMXG00000012356	thumpd1	84	61.649	Astyanax_mexicanus
ENSGACG00000019511	thumpd1	78	61.868	ENSBTAG00000047673	THUMPD1	71	61.868	Bos_taurus
ENSGACG00000019511	thumpd1	78	61.176	ENSCJAG00000009499	THUMPD1	76	59.108	Callithrix_jacchus
ENSGACG00000019511	thumpd1	79	61.004	ENSCAFG00000017985	THUMPD1	72	61.004	Canis_familiaris
ENSGACG00000019511	thumpd1	79	61.004	ENSCAFG00020021861	THUMPD1	72	61.004	Canis_lupus_dingo
ENSGACG00000019511	thumpd1	78	62.257	ENSCHIG00000010134	THUMPD1	71	61.479	Capra_hircus
ENSGACG00000019511	thumpd1	83	57.042	ENSTSYG00000011537	THUMPD1	75	59.848	Carlito_syrichta
ENSGACG00000019511	thumpd1	80	61.217	ENSCPOG00000008919	-	77	59.636	Cavia_porcellus
ENSGACG00000019511	thumpd1	80	61.217	ENSCPOG00000023684	-	77	59.636	Cavia_porcellus
ENSGACG00000019511	thumpd1	80	59.108	ENSCCAG00000030205	THUMPD1	76	59.108	Cebus_capucinus
ENSGACG00000019511	thumpd1	80	55.390	ENSCCAG00000019379	-	67	55.390	Cebus_capucinus
ENSGACG00000019511	thumpd1	81	47.653	ENSCATG00000020844	-	76	47.970	Cercocebus_atys
ENSGACG00000019511	thumpd1	78	61.569	ENSCATG00000040309	THUMPD1	72	61.569	Cercocebus_atys
ENSGACG00000019511	thumpd1	84	58.719	ENSCLAG00000016508	THUMPD1	79	58.007	Chinchilla_lanigera
ENSGACG00000019511	thumpd1	78	61.569	ENSCSAG00000007610	THUMPD1	72	61.569	Chlorocebus_sabaeus
ENSGACG00000019511	thumpd1	81	43.772	ENSCSAG00000009860	-	60	44.727	Chlorocebus_sabaeus
ENSGACG00000019511	thumpd1	88	57.288	ENSCHOG00000005587	THUMPD1	82	56.949	Choloepus_hoffmanni
ENSGACG00000019511	thumpd1	97	57.846	ENSCPBG00000019055	THUMPD1	88	57.846	Chrysemys_picta_bellii
ENSGACG00000019511	thumpd1	77	30.627	ENSCING00000021274	-	95	30.627	Ciona_intestinalis
ENSGACG00000019511	thumpd1	69	55.459	ENSCANG00000035822	-	72	56.054	Colobus_angolensis_palliatus
ENSGACG00000019511	thumpd1	86	49.104	ENSCANG00000038770	THUMPD1	89	48.252	Colobus_angolensis_palliatus
ENSGACG00000019511	thumpd1	76	63.529	ENSCGRG00001014829	Thumpd1	72	63.529	Cricetulus_griseus_chok1gshd
ENSGACG00000019511	thumpd1	76	63.529	ENSCGRG00000000060	Thumpd1	72	63.529	Cricetulus_griseus_crigri
ENSGACG00000019511	thumpd1	100	70.552	ENSCSEG00000002041	thumpd1	100	73.313	Cynoglossus_semilaevis
ENSGACG00000019511	thumpd1	89	80.756	ENSCVAG00000014960	thumpd1	96	76.849	Cyprinodon_variegatus
ENSGACG00000019511	thumpd1	85	59.567	ENSDARG00000100264	thumpd1	79	59.567	Danio_rerio
ENSGACG00000019511	thumpd1	97	54.658	ENSDNOG00000043510	THUMPD1	91	52.679	Dasypus_novemcinctus
ENSGACG00000019511	thumpd1	80	60.000	ENSDORG00000028216	Thumpd1	76	59.779	Dipodomys_ordii
ENSGACG00000019511	thumpd1	74	34.118	FBgn0035532	CG15014	82	32.971	Drosophila_melanogaster
ENSGACG00000019511	thumpd1	78	56.031	ENSETEG00000002763	THUMPD1	61	56.371	Echinops_telfairi
ENSGACG00000019511	thumpd1	79	42.222	ENSEBUG00000011011	THUMPD1	80	39.617	Eptatretus_burgeri
ENSGACG00000019511	thumpd1	96	53.251	ENSECAG00000005354	THUMPD1	88	52.632	Equus_caballus
ENSGACG00000019511	thumpd1	79	59.925	ENSEEUG00000011256	THUMPD1	63	60.536	Erinaceus_europaeus
ENSGACG00000019511	thumpd1	82	76.030	ENSELUG00000013612	thumpd1	63	76.404	Esox_lucius
ENSGACG00000019511	thumpd1	80	59.623	ENSFCAG00000039296	THUMPD1	72	60.618	Felis_catus
ENSGACG00000019511	thumpd1	73	58.848	ENSFALG00000014029	THUMPD1	86	59.504	Ficedula_albicollis
ENSGACG00000019511	thumpd1	89	77.027	ENSFHEG00000013319	thumpd1	83	77.855	Fundulus_heteroclitus
ENSGACG00000019511	thumpd1	97	66.250	ENSGMOG00000003369	thumpd1	99	65.938	Gadus_morhua
ENSGACG00000019511	thumpd1	54	56.593	ENSGALG00000031384	-	75	58.235	Gallus_gallus
ENSGACG00000019511	thumpd1	99	73.394	ENSGAFG00000011000	thumpd1	100	72.171	Gambusia_affinis
ENSGACG00000019511	thumpd1	93	57.367	ENSGAGG00000008225	THUMPD1	98	57.367	Gopherus_agassizii
ENSGACG00000019511	thumpd1	56	54.098	ENSGGOG00000043232	-	70	47.186	Gorilla_gorilla
ENSGACG00000019511	thumpd1	78	61.176	ENSGGOG00000005231	-	58	61.176	Gorilla_gorilla
ENSGACG00000019511	thumpd1	94	74.267	ENSHBUG00000017996	thumpd1	98	72.086	Haplochromis_burtoni
ENSGACG00000019511	thumpd1	81	59.273	ENSHGLG00000011001	-	76	59.480	Heterocephalus_glaber_female
ENSGACG00000019511	thumpd1	81	59.636	ENSHGLG00100016023	THUMPD1	76	59.851	Heterocephalus_glaber_male
ENSGACG00000019511	thumpd1	73	69.492	ENSHCOG00000008618	thumpd1	70	59.016	Hippocampus_comes
ENSGACG00000019511	thumpd1	82	58.303	ENSIPUG00000012500	thumpd1	71	57.285	Ictalurus_punctatus
ENSGACG00000019511	thumpd1	80	60.595	ENSSTOG00000007011	THUMPD1	76	60.595	Ictidomys_tridecemlineatus
ENSGACG00000019511	thumpd1	80	59.023	ENSJJAG00000004295	-	75	59.023	Jaculus_jaculus
ENSGACG00000019511	thumpd1	91	59.016	ENSKMAG00000009545	thumpd1	80	57.317	Kryptolebias_marmoratus
ENSGACG00000019511	thumpd1	100	73.476	ENSLBEG00000009349	thumpd1	100	72.644	Labrus_bergylta
ENSGACG00000019511	thumpd1	78	60.071	ENSLACG00000005833	THUMPD1	77	59.011	Latimeria_chalumnae
ENSGACG00000019511	thumpd1	93	60.390	ENSLOCG00000000854	thumpd1	97	61.290	Lepisosteus_oculatus
ENSGACG00000019511	thumpd1	79	61.628	ENSLAFG00000025838	THUMPD1	72	61.628	Loxodonta_africana
ENSGACG00000019511	thumpd1	78	61.569	ENSMFAG00000036996	THUMPD1	72	61.569	Macaca_fascicularis
ENSGACG00000019511	thumpd1	84	47.331	ENSMFAG00000041474	-	87	47.331	Macaca_fascicularis
ENSGACG00000019511	thumpd1	84	47.331	ENSMMUG00000038414	-	87	47.331	Macaca_mulatta
ENSGACG00000019511	thumpd1	78	61.569	ENSMMUG00000004225	THUMPD1	72	61.569	Macaca_mulatta
ENSGACG00000019511	thumpd1	69	52.564	ENSMNEG00000038856	-	72	53.070	Macaca_nemestrina
ENSGACG00000019511	thumpd1	78	61.569	ENSMNEG00000020726	THUMPD1	72	61.569	Macaca_nemestrina
ENSGACG00000019511	thumpd1	78	61.569	ENSMLEG00000036436	THUMPD1	72	61.569	Mandrillus_leucophaeus
ENSGACG00000019511	thumpd1	69	53.017	ENSMLEG00000030012	-	72	53.540	Mandrillus_leucophaeus
ENSGACG00000019511	thumpd1	96	76.527	ENSMAMG00000006858	thumpd1	97	72.923	Mastacembelus_armatus
ENSGACG00000019511	thumpd1	94	74.267	ENSMZEG00005013693	thumpd1	98	72.086	Maylandia_zebra
ENSGACG00000019511	thumpd1	61	59.406	ENSMGAG00000010340	THUMPD1	96	60.406	Meleagris_gallopavo
ENSGACG00000019511	thumpd1	78	63.281	ENSMAUG00000013306	Thumpd1	70	62.500	Mesocricetus_auratus
ENSGACG00000019511	thumpd1	63	54.854	ENSMICG00000030865	-	59	54.854	Microcebus_murinus
ENSGACG00000019511	thumpd1	81	58.909	ENSMICG00000038483	-	76	59.851	Microcebus_murinus
ENSGACG00000019511	thumpd1	76	62.745	ENSMOCG00000003447	Thumpd1	72	62.745	Microtus_ochrogaster
ENSGACG00000019511	thumpd1	84	77.899	ENSMMOG00000011323	thumpd1	82	77.899	Mola_mola
ENSGACG00000019511	thumpd1	96	56.000	ENSMODG00000024776	-	74	62.731	Monodelphis_domestica
ENSGACG00000019511	thumpd1	96	55.692	ENSMODG00000006971	-	74	61.905	Monodelphis_domestica
ENSGACG00000019511	thumpd1	82	82.963	ENSMALG00000019522	thumpd1	99	75.862	Monopterus_albus
ENSGACG00000019511	thumpd1	80	61.049	MGP_CAROLIEiJ_G0030382	Thumpd1	76	61.049	Mus_caroli
ENSGACG00000019511	thumpd1	97	52.493	ENSMUSG00000030942	Thumpd1	97	52.493	Mus_musculus
ENSGACG00000019511	thumpd1	97	52.478	MGP_PahariEiJ_G0013593	Thumpd1	97	52.187	Mus_pahari
ENSGACG00000019511	thumpd1	92	55.882	ENSMLUG00000010547	THUMPD1	89	54.403	Myotis_lucifugus
ENSGACG00000019511	thumpd1	91	55.700	ENSNGAG00000018643	Thumpd1	85	56.478	Nannospalax_galili
ENSGACG00000019511	thumpd1	94	73.616	ENSNBRG00000006987	thumpd1	91	71.254	Neolamprologus_brichardi
ENSGACG00000019511	thumpd1	96	52.716	ENSNLEG00000012369	THUMPD1	87	52.716	Nomascus_leucogenys
ENSGACG00000019511	thumpd1	81	59.489	ENSODEG00000012360	THUMPD1	76	59.701	Octodon_degus
ENSGACG00000019511	thumpd1	87	76.655	ENSONIG00000000146	thumpd1	99	77.622	Oreochromis_niloticus
ENSGACG00000019511	thumpd1	95	55.063	ENSOANG00000014297	THUMPD1	83	55.484	Ornithorhynchus_anatinus
ENSGACG00000019511	thumpd1	78	62.353	ENSOCUG00000009895	-	72	62.353	Oryctolagus_cuniculus
ENSGACG00000019511	thumpd1	82	80.970	ENSORLG00000027557	thumpd1	87	80.970	Oryzias_latipes
ENSGACG00000019511	thumpd1	82	80.597	ENSORLG00020010206	thumpd1	98	71.656	Oryzias_latipes_hni
ENSGACG00000019511	thumpd1	82	79.851	ENSORLG00015009581	thumpd1	98	71.338	Oryzias_latipes_hsok
ENSGACG00000019511	thumpd1	85	78.545	ENSOMEG00000019361	thumpd1	87	76.573	Oryzias_melastigma
ENSGACG00000019511	thumpd1	78	61.176	ENSOGAG00000026723	THUMPD1	72	61.176	Otolemur_garnettii
ENSGACG00000019511	thumpd1	78	62.257	ENSOARG00000013107	THUMPD1	71	62.257	Ovis_aries
ENSGACG00000019511	thumpd1	78	60.784	ENSPPAG00000033818	-	58	60.784	Pan_paniscus
ENSGACG00000019511	thumpd1	85	46.403	ENSPPAG00000001653	-	84	46.403	Pan_paniscus
ENSGACG00000019511	thumpd1	79	61.390	ENSPPRG00000014118	-	72	61.390	Panthera_pardus
ENSGACG00000019511	thumpd1	79	61.004	ENSPTIG00000013856	-	72	61.004	Panthera_tigris_altaica
ENSGACG00000019511	thumpd1	82	44.403	ENSPTRG00000046073	-	88	40.823	Pan_troglodytes
ENSGACG00000019511	thumpd1	78	60.784	ENSPTRG00000007848	THUMPD1	58	60.784	Pan_troglodytes
ENSGACG00000019511	thumpd1	78	61.569	ENSPANG00000025507	THUMPD1	72	61.569	Papio_anubis
ENSGACG00000019511	thumpd1	69	52.991	ENSPANG00000034881	-	72	53.509	Papio_anubis
ENSGACG00000019511	thumpd1	88	64.384	ENSPKIG00000014491	thumpd1	99	59.259	Paramormyrops_kingsleyae
ENSGACG00000019511	thumpd1	80	63.704	ENSPSIG00000012430	THUMPD1	92	63.704	Pelodiscus_sinensis
ENSGACG00000019511	thumpd1	79	78.327	ENSPMGG00000014479	thumpd1	90	78.846	Periophthalmus_magnuspinnatus
ENSGACG00000019511	thumpd1	58	52.083	ENSPMAG00000001389	thumpd1	82	54.651	Petromyzon_marinus
ENSGACG00000019511	thumpd1	81	61.538	ENSPCIG00000029241	THUMPD1	54	61.538	Phascolarctos_cinereus
ENSGACG00000019511	thumpd1	99	72.866	ENSPFOG00000012649	thumpd1	100	71.646	Poecilia_formosa
ENSGACG00000019511	thumpd1	99	72.477	ENSPLAG00000000137	thumpd1	100	71.254	Poecilia_latipinna
ENSGACG00000019511	thumpd1	99	73.089	ENSPMEG00000007750	thumpd1	100	71.865	Poecilia_mexicana
ENSGACG00000019511	thumpd1	82	80.515	ENSPREG00000000144	thumpd1	91	79.044	Poecilia_reticulata
ENSGACG00000019511	thumpd1	58	64.021	ENSPPYG00000007160	-	68	64.021	Pongo_abelii
ENSGACG00000019511	thumpd1	74	54.132	ENSPCAG00000001534	THUMPD1	85	54.132	Procavia_capensis
ENSGACG00000019511	thumpd1	81	60.000	ENSPCOG00000024663	THUMPD1	76	60.967	Propithecus_coquereli
ENSGACG00000019511	thumpd1	78	59.216	ENSPVAG00000005659	-	71	59.216	Pteropus_vampyrus
ENSGACG00000019511	thumpd1	94	74.267	ENSPNYG00000007061	thumpd1	97	72.086	Pundamilia_nyererei
ENSGACG00000019511	thumpd1	94	59.677	ENSPNAG00000024872	thumpd1	99	59.355	Pygocentrus_nattereri
ENSGACG00000019511	thumpd1	69	56.332	ENSRBIG00000040136	-	75	56.951	Rhinopithecus_bieti
ENSGACG00000019511	thumpd1	96	53.035	ENSRBIG00000040752	THUMPD1	87	53.035	Rhinopithecus_bieti
ENSGACG00000019511	thumpd1	96	53.035	ENSRROG00000042189	THUMPD1	87	53.035	Rhinopithecus_roxellana
ENSGACG00000019511	thumpd1	69	55.895	ENSRROG00000045699	-	75	56.502	Rhinopithecus_roxellana
ENSGACG00000019511	thumpd1	80	60.223	ENSSBOG00000034246	THUMPD1	76	60.223	Saimiri_boliviensis_boliviensis
ENSGACG00000019511	thumpd1	80	62.547	ENSSHAG00000003853	THUMPD1	75	62.547	Sarcophilus_harrisii
ENSGACG00000019511	thumpd1	82	59.245	ENSSFOG00015007512	thumpd1	98	52.308	Scleropages_formosus
ENSGACG00000019511	thumpd1	99	73.939	ENSSMAG00000000723	thumpd1	100	74.242	Scophthalmus_maximus
ENSGACG00000019511	thumpd1	100	76.596	ENSSDUG00000014502	thumpd1	100	77.204	Seriola_dumerili
ENSGACG00000019511	thumpd1	100	76.900	ENSSLDG00000007694	thumpd1	100	77.508	Seriola_lalandi_dorsalis
ENSGACG00000019511	thumpd1	89	58.503	ENSSPUG00000005096	THUMPD1	90	58.140	Sphenodon_punctatus
ENSGACG00000019511	thumpd1	100	78.419	ENSSPAG00000006993	thumpd1	100	77.812	Stegastes_partitus
ENSGACG00000019511	thumpd1	78	61.328	ENSSSCG00000024748	THUMPD1	71	61.328	Sus_scrofa
ENSGACG00000019511	thumpd1	79	60.687	ENSTGUG00000009247	THUMPD1	92	61.628	Taeniopygia_guttata
ENSGACG00000019511	thumpd1	97	75.312	ENSTRUG00000015656	thumpd1	99	75.625	Takifugu_rubripes
ENSGACG00000019511	thumpd1	91	76.333	ENSTNIG00000001584	thumpd1	98	76.333	Tetraodon_nigroviridis
ENSGACG00000019511	thumpd1	81	58.242	ENSTBEG00000005252	THUMPD1	67	59.176	Tupaia_belangeri
ENSGACG00000019511	thumpd1	80	60.674	ENSTTRG00000016435	THUMPD1	75	60.674	Tursiops_truncatus
ENSGACG00000019511	thumpd1	58	49.735	ENSUAMG00000005779	-	81	49.735	Ursus_americanus
ENSGACG00000019511	thumpd1	78	62.745	ENSVPAG00000003422	THUMPD1	73	62.745	Vicugna_pacos
ENSGACG00000019511	thumpd1	97	54.259	ENSVVUG00000023241	THUMPD1	87	54.259	Vulpes_vulpes
ENSGACG00000019511	thumpd1	90	48.639	ENSXETG00000005539	thumpd1	98	48.639	Xenopus_tropicalis
ENSGACG00000019511	thumpd1	53	67.978	ENSXCOG00000016003	thumpd1	78	74.534	Xiphophorus_couchianus
ENSGACG00000019511	thumpd1	89	78.767	ENSXMAG00000026052	thumpd1	100	70.948	Xiphophorus_maculatus