EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7541 bases
Position: chrgroupIX:18092917-18100457
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	1	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	2	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	3	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	4	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	5	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	6	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	7	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	8	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	9	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	10	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	11	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	12	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	13	14
ENSGACP00000025841	zf-C2H2	PF00096.26	1.2e-77	14	14
ENSGACP00000025842	zf-C2H2	PF00096.26	2.9e-29	1	4
ENSGACP00000025842	zf-C2H2	PF00096.26	2.9e-29	2	4
ENSGACP00000025842	zf-C2H2	PF00096.26	2.9e-29	3	4
ENSGACP00000025842	zf-C2H2	PF00096.26	2.9e-29	4	4
ENSGACP00000025841	zf-met	PF12874.7	2.1e-22	1	4
ENSGACP00000025841	zf-met	PF12874.7	2.1e-22	2	4
ENSGACP00000025841	zf-met	PF12874.7	2.1e-22	3	4
ENSGACP00000025841	zf-met	PF12874.7	2.1e-22	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025893	-	492	-	ENSGACP00000025842	164 (aa)	-	G3Q7I2
ENSGACT00000025892	-	2454	-	ENSGACP00000025841	818 (aa)	-	G3Q7I1

Gene Model

Click here to download ENSGACG00000019550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019550	-	100	45.570	ENSGACG00000010393	-	100	45.570
ENSGACG00000019550	-	98	48.101	ENSGACG00000004549	-	99	48.101
ENSGACG00000019550	-	96	44.872	ENSGACG00000012611	-	89	38.916
ENSGACG00000019550	-	100	44.037	ENSGACG00000018088	si:dkey-7i4.5	99	44.037
ENSGACG00000019550	-	96	39.560	ENSGACG00000018415	-	99	45.192
ENSGACG00000019550	-	92	36.957	ENSGACG00000001166	-	99	36.957
ENSGACG00000019550	-	97	42.857	ENSGACG00000015729	-	97	42.857
ENSGACG00000019550	-	97	41.429	ENSGACG00000003372	zbtb47b	55	41.429
ENSGACG00000019550	-	99	42.254	ENSGACG00000014714	si:dkey-89b17.4	51	42.254
ENSGACG00000019550	-	96	44.654	ENSGACG00000001358	-	99	44.654
ENSGACG00000019550	-	92	31.200	ENSGACG00000006824	znf131	70	35.294
ENSGACG00000019550	-	96	37.107	ENSGACG00000011187	zbtb48	59	37.107
ENSGACG00000019550	-	94	42.857	ENSGACG00000011808	e4f1	62	42.500
ENSGACG00000019550	-	99	37.069	ENSGACG00000002626	si:ch211-216l23.1	76	37.069
ENSGACG00000019550	-	99	45.098	ENSGACG00000013659	-	95	45.098
ENSGACG00000019550	-	100	52.308	ENSGACG00000013652	-	100	52.308
ENSGACG00000019550	-	100	37.113	ENSGACG00000008733	znf646	80	37.113
ENSGACG00000019550	-	99	45.238	ENSGACG00000014395	-	99	45.238
ENSGACG00000019550	-	96	47.712	ENSGACG00000004765	-	100	47.712
ENSGACG00000019550	-	96	49.123	ENSGACG00000004761	-	100	49.123
ENSGACG00000019550	-	95	37.931	ENSGACG00000001618	-	89	39.241
ENSGACG00000019550	-	98	46.835	ENSGACG00000004478	-	100	49.515
ENSGACG00000019550	-	91	41.304	ENSGACG00000017935	snai2	58	41.509
ENSGACG00000019550	-	97	47.020	ENSGACG00000005239	-	99	43.478
ENSGACG00000019550	-	99	42.657	ENSGACG00000009449	znf526	73	34.667
ENSGACG00000019550	-	98	42.500	ENSGACG00000001371	-	100	42.500
ENSGACG00000019550	-	100	43.396	ENSGACG00000010352	si:ch211-207i20.2	94	43.396
ENSGACG00000019550	-	96	45.238	ENSGACG00000008982	scrt1b	72	39.423
ENSGACG00000019550	-	99	48.077	ENSGACG00000005553	znf236	99	41.509
ENSGACG00000019550	-	100	42.667	ENSGACG00000019863	-	99	41.401
ENSGACG00000019550	-	68	32.955	ENSGACG00000020411	hinfp	70	32.955
ENSGACG00000019550	-	99	42.331	ENSGACG00000010384	-	100	42.331
ENSGACG00000019550	-	92	47.748	ENSGACG00000006283	-	96	45.536
ENSGACG00000019550	-	96	44.737	ENSGACG00000004072	-	73	39.423
ENSGACG00000019550	-	99	42.675	ENSGACG00000018816	-	100	42.675
ENSGACG00000019550	-	96	42.675	ENSGACG00000012415	GZF1	99	43.972
ENSGACG00000019550	-	96	41.228	ENSGACG00000005742	-	61	40.860
ENSGACG00000019550	-	93	41.558	ENSGACG00000018794	ovol1a	56	44.444
ENSGACG00000019550	-	99	44.375	ENSGACG00000012517	-	100	44.375
ENSGACG00000019550	-	97	39.610	ENSGACG00000003258	znf319b	85	41.259
ENSGACG00000019550	-	95	38.849	ENSGACG00000018134	gfi1b	64	38.194
ENSGACG00000019550	-	96	41.667	ENSGACG00000015674	gfi1aa	62	41.667
ENSGACG00000019550	-	96	35.000	ENSGACG00000014840	maza	97	36.667
ENSGACG00000019550	-	96	44.186	ENSGACG00000016248	-	99	44.186
ENSGACG00000019550	-	100	43.158	ENSGACG00000010051	-	99	43.158
ENSGACG00000019550	-	97	38.158	ENSGACG00000001377	-	93	38.158
ENSGACG00000019550	-	99	40.373	ENSGACG00000010515	ZNF628	100	40.373
ENSGACG00000019550	-	96	48.344	ENSGACG00000013660	-	99	48.344
ENSGACG00000019550	-	100	42.991	ENSGACG00000001523	-	99	43.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019550	-	100	95.455	ENSAPOG00000002213	-	97	95.455	Acanthochromis_polyacanthus
ENSGACG00000019550	-	81	98.095	ENSACIG00000013163	-	87	98.095	Amphilophus_citrinellus
ENSGACG00000019550	-	96	85.401	ENSACIG00000013149	-	78	85.401	Amphilophus_citrinellus
ENSGACG00000019550	-	100	95.851	ENSAOCG00000013124	-	94	95.851	Amphiprion_ocellaris
ENSGACG00000019550	-	100	95.851	ENSAPEG00000009997	-	94	95.851	Amphiprion_percula
ENSGACG00000019550	-	100	92.140	ENSATEG00000004127	-	98	95.473	Anabas_testudineus
ENSGACG00000019550	-	86	95.021	ENSACLG00000005708	-	92	95.021	Astatotilapia_calliptera
ENSGACG00000019550	-	100	80.258	ENSCVAG00000014734	-	97	80.258	Cyprinodon_variegatus
ENSGACG00000019550	-	78	69.128	ENSFHEG00000014060	-	82	69.128	Fundulus_heteroclitus
ENSGACG00000019550	-	80	79.596	ENSGMOG00000017526	-	97	79.596	Gadus_morhua
ENSGACG00000019550	-	86	92.917	ENSGAFG00000011174	-	94	92.917	Gambusia_affinis
ENSGACG00000019550	-	86	95.021	ENSHBUG00000006662	-	92	95.021	Haplochromis_burtoni
ENSGACG00000019550	-	81	92.340	ENSHCOG00000003041	-	98	92.340	Hippocampus_comes
ENSGACG00000019550	-	100	84.586	ENSKMAG00000009979	-	91	84.586	Kryptolebias_marmoratus
ENSGACG00000019550	-	100	94.650	ENSLBEG00000010165	-	94	94.650	Labrus_bergylta
ENSGACG00000019550	-	99	94.304	ENSMAMG00000006312	-	100	69.048	Mastacembelus_armatus
ENSGACG00000019550	-	86	95.021	ENSMZEG00005013913	-	92	95.021	Maylandia_zebra
ENSGACG00000019550	-	100	98.611	ENSMMOG00000011282	-	88	98.611	Mola_mola
ENSGACG00000019550	-	100	92.181	ENSMALG00000000494	-	89	92.181	Monopterus_albus
ENSGACG00000019550	-	86	64.754	ENSNBRG00000007602	-	89	64.754	Neolamprologus_brichardi
ENSGACG00000019550	-	96	93.506	ENSONIG00000003856	-	100	93.506	Oreochromis_niloticus
ENSGACG00000019550	-	100	67.660	ENSORLG00000010117	-	89	58.436	Oryzias_latipes
ENSGACG00000019550	-	100	90.496	ENSORLG00020000219	-	92	90.496	Oryzias_latipes_hni
ENSGACG00000019550	-	100	67.811	ENSORLG00015000258	-	92	90.496	Oryzias_latipes_hsok
ENSGACG00000019550	-	80	92.735	ENSOMEG00000018262	-	95	92.735	Oryzias_melastigma
ENSGACG00000019550	-	99	84.472	ENSPFOG00000013455	-	100	78.261	Poecilia_formosa
ENSGACG00000019550	-	100	92.500	ENSPLAG00000004027	-	89	92.500	Poecilia_latipinna
ENSGACG00000019550	-	100	92.917	ENSPMEG00000007589	-	94	92.917	Poecilia_mexicana
ENSGACG00000019550	-	99	89.873	ENSPREG00000000153	-	89	89.873	Poecilia_reticulata
ENSGACG00000019550	-	99	87.333	ENSPNYG00000007781	-	99	93.525	Pundamilia_nyererei
ENSGACG00000019550	-	84	99.454	ENSPNYG00000007814	-	94	99.454	Pundamilia_nyererei
ENSGACG00000019550	-	98	93.151	ENSSMAG00000021251	-	98	93.776	Scophthalmus_maximus
ENSGACG00000019550	-	100	88.722	ENSSDUG00000013904	-	97	88.722	Seriola_dumerili
ENSGACG00000019550	-	100	89.098	ENSSLDG00000006994	-	97	89.098	Seriola_lalandi_dorsalis
ENSGACG00000019550	-	100	96.266	ENSSPAG00000011524	-	94	96.266	Stegastes_partitus
ENSGACG00000019550	-	100	91.026	ENSTRUG00000015687	-	93	91.083	Takifugu_rubripes
ENSGACG00000019550	-	100	85.093	ENSTNIG00000008242	-	99	85.093	Tetraodon_nigroviridis
ENSGACG00000019550	-	88	70.110	ENSXCOG00000015947	-	98	70.110	Xiphophorus_couchianus
ENSGACG00000019550	-	99	92.917	ENSXMAG00000023291	-	94	92.917	Xiphophorus_maculatus