EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019596 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4183 bases
Position: chrgroupIV:26343730-26347912
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025905	SLBP_RNA_bind	PF15247.6	9.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025956	-	738	-	ENSGACP00000025905	246 (aa)	-	G3Q7P5

Gene Model

Click here to download ENSGACG00000019596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019596	slbp	98	50.000	ENSG00000163950	SLBP	84	54.950	Homo_sapiens
ENSGACG00000019596	slbp	95	73.664	ENSAPOG00000004953	slbp	93	73.664	Acanthochromis_polyacanthus
ENSGACG00000019596	slbp	61	64.474	ENSAMEG00000016915	SLBP	68	64.516	Ailuropoda_melanoleuca
ENSGACG00000019596	slbp	94	69.076	ENSACIG00000022308	slbp	96	69.076	Amphilophus_citrinellus
ENSGACG00000019596	slbp	95	72.519	ENSAOCG00000024545	slbp	93	72.519	Amphiprion_ocellaris
ENSGACG00000019596	slbp	95	73.282	ENSAPEG00000017629	slbp	93	73.282	Amphiprion_percula
ENSGACG00000019596	slbp	96	72.830	ENSATEG00000016358	slbp	94	72.830	Anabas_testudineus
ENSGACG00000019596	slbp	77	53.431	ENSAPLG00000015989	-	92	53.659	Anas_platyrhynchos
ENSGACG00000019596	slbp	93	49.593	ENSANAG00000034769	SLBP	84	55.446	Aotus_nancymaae
ENSGACG00000019596	slbp	95	69.582	ENSACLG00000007036	-	92	70.543	Astatotilapia_calliptera
ENSGACG00000019596	slbp	84	65.238	ENSAMXG00000014527	slbp	92	57.708	Astyanax_mexicanus
ENSGACG00000019596	slbp	86	53.991	ENSBTAG00000001328	SLBP	89	48.837	Bos_taurus
ENSGACG00000019596	slbp	93	50.206	ENSCJAG00000001790	SLBP	85	48.617	Callithrix_jacchus
ENSGACG00000019596	slbp	86	53.521	ENSCAFG00000015016	SLBP	74	54.167	Canis_familiaris
ENSGACG00000019596	slbp	86	53.521	ENSCAFG00020012334	SLBP	74	54.167	Canis_lupus_dingo
ENSGACG00000019596	slbp	86	54.460	ENSCHIG00000019364	SLBP	86	50.000	Capra_hircus
ENSGACG00000019596	slbp	81	54.187	ENSTSYG00000000376	SLBP	78	54.369	Carlito_syrichta
ENSGACG00000019596	slbp	67	58.140	ENSCPOG00000000031	SLBP	84	49.200	Cavia_porcellus
ENSGACG00000019596	slbp	98	50.000	ENSCATG00000029173	SLBP	84	54.950	Cercocebus_atys
ENSGACG00000019596	slbp	68	59.412	ENSCLAG00000008157	SLBP	71	55.072	Chinchilla_lanigera
ENSGACG00000019596	slbp	93	41.224	ENSCSAG00000015628	SLBP	88	40.784	Chlorocebus_sabaeus
ENSGACG00000019596	slbp	93	50.410	ENSCPBG00000000746	SLBP	86	50.410	Chrysemys_picta_bellii
ENSGACG00000019596	slbp	76	55.051	ENSCANG00000041008	SLBP	92	54.229	Colobus_angolensis_palliatus
ENSGACG00000019596	slbp	82	55.392	ENSCGRG00001009760	-	86	49.398	Cricetulus_griseus_chok1gshd
ENSGACG00000019596	slbp	81	54.950	ENSCGRG00001012991	-	87	49.393	Cricetulus_griseus_chok1gshd
ENSGACG00000019596	slbp	82	55.392	ENSCGRG00000004506	Slbp	86	49.398	Cricetulus_griseus_crigri
ENSGACG00000019596	slbp	93	65.098	ENSCSEG00000020337	-	92	65.098	Cynoglossus_semilaevis
ENSGACG00000019596	slbp	93	63.492	ENSCVAG00000019592	-	93	63.889	Cyprinodon_variegatus
ENSGACG00000019596	slbp	89	57.333	ENSDARG00000100558	slbp	72	57.333	Danio_rerio
ENSGACG00000019596	slbp	84	55.924	ENSDNOG00000047539	SLBP	74	56.075	Dasypus_novemcinctus
ENSGACG00000019596	slbp	61	60.000	ENSDORG00000003028	Slbp	91	63.636	Dipodomys_ordii
ENSGACG00000019596	slbp	80	53.202	ENSETEG00000004641	SLBP	82	56.039	Echinops_telfairi
ENSGACG00000019596	slbp	50	64.516	ENSEASG00005022714	SLBP	69	60.584	Equus_asinus_asinus
ENSGACG00000019596	slbp	78	58.549	ENSECAG00000011689	SLBP	60	58.673	Equus_caballus
ENSGACG00000019596	slbp	95	58.964	ENSELUG00000012854	slbp	86	58.964	Esox_lucius
ENSGACG00000019596	slbp	86	51.887	ENSFCAG00000000169	SLBP	69	61.404	Felis_catus
ENSGACG00000019596	slbp	93	50.000	ENSFALG00000010003	-	87	50.000	Ficedula_albicollis
ENSGACG00000019596	slbp	71	57.303	ENSFDAG00000007592	SLBP	76	55.556	Fukomys_damarensis
ENSGACG00000019596	slbp	92	66.798	ENSFHEG00000007497	slbp	93	65.882	Fundulus_heteroclitus
ENSGACG00000019596	slbp	63	72.611	ENSGMOG00000015352	slbp	100	71.250	Gadus_morhua
ENSGACG00000019596	slbp	100	49.615	ENSGALG00000015712	SLBP	93	49.615	Gallus_gallus
ENSGACG00000019596	slbp	93	66.667	ENSGAFG00000019577	slbp	92	66.667	Gambusia_affinis
ENSGACG00000019596	slbp	78	59.686	ENSGAGG00000012096	SLBP	76	59.686	Gopherus_agassizii
ENSGACG00000019596	slbp	98	50.000	ENSGGOG00000003167	SLBP	84	54.950	Gorilla_gorilla
ENSGACG00000019596	slbp	95	69.962	ENSHBUG00000003338	-	92	70.930	Haplochromis_burtoni
ENSGACG00000019596	slbp	71	51.955	ENSHGLG00000010461	-	65	51.724	Heterocephalus_glaber_female
ENSGACG00000019596	slbp	50	62.205	ENSHGLG00000005955	-	59	68.376	Heterocephalus_glaber_female
ENSGACG00000019596	slbp	67	52.121	ENSHGLG00000008313	-	71	45.894	Heterocephalus_glaber_female
ENSGACG00000019596	slbp	67	53.333	ENSHGLG00100010510	-	71	46.860	Heterocephalus_glaber_male
ENSGACG00000019596	slbp	71	51.955	ENSHGLG00100014906	-	65	51.724	Heterocephalus_glaber_male
ENSGACG00000019596	slbp	71	56.742	ENSHGLG00100014018	-	91	57.868	Heterocephalus_glaber_male
ENSGACG00000019596	slbp	95	68.340	ENSHCOG00000013425	slbp	93	68.340	Hippocampus_comes
ENSGACG00000019596	slbp	83	59.346	ENSIPUG00000016780	slbp	79	58.685	Ictalurus_punctatus
ENSGACG00000019596	slbp	67	60.479	ENSSTOG00000003262	SLBP	71	54.589	Ictidomys_tridecemlineatus
ENSGACG00000019596	slbp	82	56.098	ENSJJAG00000020549	-	86	50.000	Jaculus_jaculus
ENSGACG00000019596	slbp	94	50.000	ENSJJAG00000002394	-	86	50.607	Jaculus_jaculus
ENSGACG00000019596	slbp	94	66.795	ENSKMAG00000008187	slbp	92	66.795	Kryptolebias_marmoratus
ENSGACG00000019596	slbp	95	66.409	ENSLBEG00000024709	slbp	93	66.409	Labrus_bergylta
ENSGACG00000019596	slbp	93	48.594	ENSLACG00000014623	SLBP	89	48.594	Latimeria_chalumnae
ENSGACG00000019596	slbp	84	62.911	ENSLOCG00000011027	slbp	88	53.875	Lepisosteus_oculatus
ENSGACG00000019596	slbp	77	59.896	ENSLAFG00000012933	SLBP	83	55.769	Loxodonta_africana
ENSGACG00000019596	slbp	93	51.046	ENSMFAG00000030130	SLBP	81	50.526	Macaca_fascicularis
ENSGACG00000019596	slbp	94	49.597	ENSMMUG00000032303	SLBP	88	54.950	Macaca_mulatta
ENSGACG00000019596	slbp	62	48.447	ENSMNEG00000008082	SLBP	67	48.780	Macaca_nemestrina
ENSGACG00000019596	slbp	88	51.101	ENSMLEG00000024639	SLBP	91	50.870	Mandrillus_leucophaeus
ENSGACG00000019596	slbp	94	69.767	ENSMAMG00000001046	-	92	69.767	Mastacembelus_armatus
ENSGACG00000019596	slbp	95	69.962	ENSMZEG00005017261	-	92	70.930	Maylandia_zebra
ENSGACG00000019596	slbp	76	54.455	ENSMGAG00000013085	SLBP	92	54.455	Meleagris_gallopavo
ENSGACG00000019596	slbp	86	54.460	ENSMAUG00000009490	Slbp	89	48.837	Mesocricetus_auratus
ENSGACG00000019596	slbp	79	56.122	ENSMICG00000014244	SLBP	72	56.477	Microcebus_murinus
ENSGACG00000019596	slbp	82	55.665	ENSMOCG00000015826	Slbp	86	57.143	Microtus_ochrogaster
ENSGACG00000019596	slbp	95	72.222	ENSMMOG00000010181	slbp	95	72.222	Mola_mola
ENSGACG00000019596	slbp	78	58.763	ENSMODG00000004304	SLBP	72	58.376	Monodelphis_domestica
ENSGACG00000019596	slbp	96	69.057	ENSMALG00000013883	-	69	69.057	Monopterus_albus
ENSGACG00000019596	slbp	93	49.796	MGP_CAROLIEiJ_G0027117	Slbp	83	57.653	Mus_caroli
ENSGACG00000019596	slbp	82	56.158	ENSMUSG00000004642	Slbp	84	57.653	Mus_musculus
ENSGACG00000019596	slbp	82	56.158	MGP_PahariEiJ_G0016901	Slbp	83	57.653	Mus_pahari
ENSGACG00000019596	slbp	82	56.158	MGP_SPRETEiJ_G0028113	Slbp	84	57.653	Mus_spretus
ENSGACG00000019596	slbp	61	53.012	ENSMPUG00000011139	SLBP	85	53.254	Mustela_putorius_furo
ENSGACG00000019596	slbp	65	60.248	ENSMLUG00000004425	SLBP	67	56.250	Myotis_lucifugus
ENSGACG00000019596	slbp	94	49.187	ENSNGAG00000020799	Slbp	86	49.799	Nannospalax_galili
ENSGACG00000019596	slbp	87	77.880	ENSNBRG00000006044	-	80	77.880	Neolamprologus_brichardi
ENSGACG00000019596	slbp	98	48.638	ENSNLEG00000000048	SLBP	84	54.950	Nomascus_leucogenys
ENSGACG00000019596	slbp	59	65.541	ENSMEUG00000002501	SLBP	81	64.901	Notamacropus_eugenii
ENSGACG00000019596	slbp	79	54.106	ENSODEG00000012641	SLBP	88	50.602	Octodon_degus
ENSGACG00000019596	slbp	95	69.202	ENSONIG00000017469	-	93	69.202	Oreochromis_niloticus
ENSGACG00000019596	slbp	77	54.950	ENSOANG00000014243	SLBP	87	54.950	Ornithorhynchus_anatinus
ENSGACG00000019596	slbp	94	60.800	ENSORLG00000024887	-	91	60.800	Oryzias_latipes
ENSGACG00000019596	slbp	92	60.569	ENSORLG00020007798	slbp	90	60.569	Oryzias_latipes_hni
ENSGACG00000019596	slbp	94	59.200	ENSORLG00015016656	slbp	91	59.200	Oryzias_latipes_hsok
ENSGACG00000019596	slbp	94	61.600	ENSOMEG00000010818	slbp	92	61.024	Oryzias_melastigma
ENSGACG00000019596	slbp	80	54.286	ENSOGAG00000009750	SLBP	89	50.781	Otolemur_garnettii
ENSGACG00000019596	slbp	65	61.728	ENSOARG00000016090	SLBP	92	54.106	Ovis_aries
ENSGACG00000019596	slbp	98	50.000	ENSPPAG00000033300	SLBP	89	50.198	Pan_paniscus
ENSGACG00000019596	slbp	62	60.390	ENSPPRG00000016897	SLBP	72	58.854	Panthera_pardus
ENSGACG00000019596	slbp	54	57.143	ENSPTIG00000015057	SLBP	91	51.955	Panthera_tigris_altaica
ENSGACG00000019596	slbp	93	51.046	ENSPTRG00000015832	SLBP	84	54.950	Pan_troglodytes
ENSGACG00000019596	slbp	77	54.774	ENSPANG00000004932	SLBP	84	54.950	Papio_anubis
ENSGACG00000019596	slbp	93	59.289	ENSPKIG00000006183	slbp	88	59.216	Paramormyrops_kingsleyae
ENSGACG00000019596	slbp	89	65.611	ENSPMGG00000017684	-	99	65.611	Periophthalmus_magnuspinnatus
ENSGACG00000019596	slbp	82	55.392	ENSPEMG00000018369	Slbp	71	55.072	Peromyscus_maniculatus_bairdii
ENSGACG00000019596	slbp	80	55.556	ENSPCIG00000013575	SLBP	59	55.714	Phascolarctos_cinereus
ENSGACG00000019596	slbp	93	67.059	ENSPFOG00000000462	slbp	92	67.059	Poecilia_formosa
ENSGACG00000019596	slbp	93	67.059	ENSPLAG00000008300	slbp	92	67.059	Poecilia_latipinna
ENSGACG00000019596	slbp	93	67.059	ENSPMEG00000020807	slbp	92	67.059	Poecilia_mexicana
ENSGACG00000019596	slbp	93	67.451	ENSPREG00000004561	slbp	92	67.451	Poecilia_reticulata
ENSGACG00000019596	slbp	98	50.000	ENSPPYG00000014529	SLBP	89	49.802	Pongo_abelii
ENSGACG00000019596	slbp	79	56.122	ENSPCOG00000017399	SLBP	87	50.800	Propithecus_coquereli
ENSGACG00000019596	slbp	93	47.755	ENSPVAG00000002807	SLBP	85	48.790	Pteropus_vampyrus
ENSGACG00000019596	slbp	95	69.962	ENSPNYG00000005451	-	92	70.930	Pundamilia_nyererei
ENSGACG00000019596	slbp	97	56.391	ENSPNAG00000018503	slbp	97	56.391	Pygocentrus_nattereri
ENSGACG00000019596	slbp	82	56.158	ENSRNOG00000037162	Slbp	86	50.201	Rattus_norvegicus
ENSGACG00000019596	slbp	98	50.000	ENSRBIG00000039159	SLBP	84	54.950	Rhinopithecus_bieti
ENSGACG00000019596	slbp	94	51.037	ENSRROG00000030081	SLBP	88	50.820	Rhinopithecus_roxellana
ENSGACG00000019596	slbp	65	53.216	ENSSBOG00000033897	SLBP	91	52.874	Saimiri_boliviensis_boliviensis
ENSGACG00000019596	slbp	78	56.650	ENSSHAG00000013939	SLBP	67	56.311	Sarcophilus_harrisii
ENSGACG00000019596	slbp	93	56.126	ENSSFOG00015019429	slbp	90	56.126	Scleropages_formosus
ENSGACG00000019596	slbp	96	68.561	ENSSMAG00000016028	-	93	68.421	Scophthalmus_maximus
ENSGACG00000019596	slbp	94	75.000	ENSSDUG00000000855	-	93	75.000	Seriola_dumerili
ENSGACG00000019596	slbp	85	59.048	ENSSLDG00000007554	-	64	59.048	Seriola_lalandi_dorsalis
ENSGACG00000019596	slbp	59	85.811	ENSSLDG00000022893	-	86	85.811	Seriola_lalandi_dorsalis
ENSGACG00000019596	slbp	90	46.781	ENSSPUG00000016007	SLBP	86	51.055	Sphenodon_punctatus
ENSGACG00000019596	slbp	96	72.243	ENSSPAG00000004021	slbp	94	72.243	Stegastes_partitus
ENSGACG00000019596	slbp	98	49.020	ENSSSCG00000008676	SLBP	89	49.612	Sus_scrofa
ENSGACG00000019596	slbp	93	50.820	ENSTGUG00000010626	-	92	51.230	Taeniopygia_guttata
ENSGACG00000019596	slbp	94	69.380	ENSTRUG00000000688	slbp	92	69.380	Takifugu_rubripes
ENSGACG00000019596	slbp	94	61.240	ENSTNIG00000000484	-	100	61.240	Tetraodon_nigroviridis
ENSGACG00000019596	slbp	61	64.901	ENSTTRG00000010901	-	68	64.935	Tursiops_truncatus
ENSGACG00000019596	slbp	61	59.603	ENSTTRG00000004010	-	82	59.091	Tursiops_truncatus
ENSGACG00000019596	slbp	82	56.863	ENSUAMG00000012990	SLBP	70	56.522	Ursus_americanus
ENSGACG00000019596	slbp	50	65.323	ENSUMAG00000006119	SLBP	68	65.354	Ursus_maritimus
ENSGACG00000019596	slbp	86	53.521	ENSVVUG00000015578	-	74	54.167	Vulpes_vulpes
ENSGACG00000019596	slbp	99	52.245	ENSXETG00000003876	slbp	96	51.822	Xenopus_tropicalis
ENSGACG00000019596	slbp	82	74.752	ENSXCOG00000008275	slbp	76	74.752	Xiphophorus_couchianus
ENSGACG00000019596	slbp	93	65.882	ENSXMAG00000001331	-	91	65.882	Xiphophorus_maculatus