EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000019618 (Gene tree)
Gene ID: -
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family%2C member 7
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4620 bases
Position: chrgroupVII:6797008-6801627
Accession: ZDB-GENE-030131-6896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000025940	RRM_1	PF00076.22	3.2e-17	1	1
ENSGACP00000025943	RRM_1	PF00076.22	3.7e-17	1	1
ENSGACP00000025935	RRM_1	PF00076.22	8.1e-16	1	1
ENSGACP00000025943	RRM_3	PF08777.11	1.3e-32	1	1
ENSGACP00000025940	RRM_3	PF08777.11	1.8e-30	1	1
ENSGACP00000025935	La	PF05383.17	4e-21	1	1
ENSGACP00000025943	La	PF05383.17	1.3e-20	1	1
ENSGACP00000025940	La	PF05383.17	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000025991	-	2013	-	ENSGACP00000025940	573 (aa)	-	G3Q7S8
ENSGACT00000025994	-	1659	-	ENSGACP00000025943	552 (aa)	-	G3Q7T1
ENSGACT00000025986	-	1466	-	ENSGACP00000025935	228 (aa)	-	G3Q7S3

Gene Model

Click here to download ENSGACG00000019618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019618	larp7	80	70.492	ENSG00000174720	LARP7	86	67.568	Homo_sapiens
ENSGACG00000019618	larp7	94	82.028	ENSAPOG00000014570	larp7	100	74.394	Acanthochromis_polyacanthus
ENSGACG00000019618	larp7	80	71.038	ENSAMEG00000015642	LARP7	97	53.596	Ailuropoda_melanoleuca
ENSGACG00000019618	larp7	99	77.093	ENSACIG00000023850	larp7	100	67.478	Amphilophus_citrinellus
ENSGACG00000019618	larp7	94	82.488	ENSAOCG00000016160	larp7	100	74.913	Amphiprion_ocellaris
ENSGACG00000019618	larp7	94	82.488	ENSAPEG00000021823	larp7	100	74.913	Amphiprion_percula
ENSGACG00000019618	larp7	94	82.488	ENSATEG00000016238	larp7	100	74.394	Anabas_testudineus
ENSGACG00000019618	larp7	80	73.077	ENSAPLG00000012887	LARP7	96	54.467	Anas_platyrhynchos
ENSGACG00000019618	larp7	80	73.077	ENSACAG00000010662	LARP7	96	53.234	Anolis_carolinensis
ENSGACG00000019618	larp7	80	70.492	ENSANAG00000031139	-	97	52.560	Aotus_nancymaae
ENSGACG00000019618	larp7	96	42.011	ENSANAG00000022318	-	96	43.116	Aotus_nancymaae
ENSGACG00000019618	larp7	93	79.070	ENSACLG00000023184	larp7	100	70.711	Astatotilapia_calliptera
ENSGACG00000019618	larp7	86	70.256	ENSAMXG00000002549	larp7	97	57.570	Astyanax_mexicanus
ENSGACG00000019618	larp7	80	70.492	ENSBTAG00000009632	LARP7	96	51.910	Bos_taurus
ENSGACG00000019618	larp7	80	70.492	ENSCJAG00000003711	LARP7	97	53.162	Callithrix_jacchus
ENSGACG00000019618	larp7	80	71.038	ENSCAFG00000011715	LARP7	97	53.401	Canis_familiaris
ENSGACG00000019618	larp7	80	71.038	ENSCAFG00020017225	LARP7	97	53.596	Canis_lupus_dingo
ENSGACG00000019618	larp7	90	62.621	ENSCHIG00000013971	-	97	48.113	Capra_hircus
ENSGACG00000019618	larp7	80	70.492	ENSCHIG00000014163	-	97	53.729	Capra_hircus
ENSGACG00000019618	larp7	80	71.038	ENSTSYG00000006769	-	100	50.613	Carlito_syrichta
ENSGACG00000019618	larp7	79	62.983	ENSTSYG00000035188	-	98	46.715	Carlito_syrichta
ENSGACG00000019618	larp7	96	45.487	ENSCAPG00000009328	LARP7	99	45.704	Cavia_aperea
ENSGACG00000019618	larp7	80	71.038	ENSCPOG00000011830	LARP7	98	51.232	Cavia_porcellus
ENSGACG00000019618	larp7	80	63.736	ENSCCAG00000023563	-	99	47.679	Cebus_capucinus
ENSGACG00000019618	larp7	80	70.492	ENSCCAG00000026787	-	97	53.504	Cebus_capucinus
ENSGACG00000019618	larp7	80	70.492	ENSCATG00000043535	LARP7	97	52.890	Cercocebus_atys
ENSGACG00000019618	larp7	80	71.038	ENSCLAG00000005894	LARP7	97	53.002	Chinchilla_lanigera
ENSGACG00000019618	larp7	80	70.492	ENSCSAG00000003810	LARP7	97	53.065	Chlorocebus_sabaeus
ENSGACG00000019618	larp7	83	65.741	ENSCHOG00000008967	-	88	65.741	Choloepus_hoffmanni
ENSGACG00000019618	larp7	80	71.038	ENSCHOG00000002379	-	97	51.024	Choloepus_hoffmanni
ENSGACG00000019618	larp7	80	70.879	ENSCPBG00000004919	LARP7	98	53.859	Chrysemys_picta_bellii
ENSGACG00000019618	larp7	72	38.182	ENSCING00000021685	-	75	38.182	Ciona_intestinalis
ENSGACG00000019618	larp7	80	70.492	ENSCANG00000031482	LARP7	95	54.110	Colobus_angolensis_palliatus
ENSGACG00000019618	larp7	79	71.111	ENSCGRG00001025050	-	99	51.839	Cricetulus_griseus_chok1gshd
ENSGACG00000019618	larp7	80	67.582	ENSCGRG00001012747	-	99	45.018	Cricetulus_griseus_chok1gshd
ENSGACG00000019618	larp7	79	71.111	ENSCGRG00000001141	-	100	47.378	Cricetulus_griseus_crigri
ENSGACG00000019618	larp7	80	67.582	ENSCGRG00000007642	-	99	48.022	Cricetulus_griseus_crigri
ENSGACG00000019618	larp7	94	76.959	ENSCSEG00000009088	larp7	100	68.111	Cynoglossus_semilaevis
ENSGACG00000019618	larp7	94	74.419	ENSCVAG00000016852	larp7	93	74.419	Cyprinodon_variegatus
ENSGACG00000019618	larp7	96	65.929	ENSDARG00000017315	larp7	98	54.389	Danio_rerio
ENSGACG00000019618	larp7	80	71.038	ENSDNOG00000013761	LARP7	97	51.877	Dasypus_novemcinctus
ENSGACG00000019618	larp7	80	71.585	ENSDORG00000008896	-	97	52.743	Dipodomys_ordii
ENSGACG00000019618	larp7	70	43.396	FBgn0260771	Larp7	67	43.396	Drosophila_melanogaster
ENSGACG00000019618	larp7	80	70.492	ENSETEG00000011692	LARP7	96	52.297	Echinops_telfairi
ENSGACG00000019618	larp7	80	70.492	ENSEASG00005005592	LARP7	97	52.196	Equus_asinus_asinus
ENSGACG00000019618	larp7	80	70.492	ENSECAG00000000834	LARP7	97	52.041	Equus_caballus
ENSGACG00000019618	larp7	80	71.038	ENSEEUG00000012824	LARP7	97	53.249	Erinaceus_europaeus
ENSGACG00000019618	larp7	92	73.832	ENSELUG00000015341	larp7	94	74.766	Esox_lucius
ENSGACG00000019618	larp7	80	71.585	ENSFCAG00000031966	LARP7	97	54.031	Felis_catus
ENSGACG00000019618	larp7	80	72.527	ENSFALG00000000972	LARP7	94	54.671	Ficedula_albicollis
ENSGACG00000019618	larp7	80	71.038	ENSFDAG00000014048	-	99	51.171	Fukomys_damarensis
ENSGACG00000019618	larp7	96	46.454	ENSFDAG00000011855	-	99	47.099	Fukomys_damarensis
ENSGACG00000019618	larp7	93	75.814	ENSFHEG00000021652	larp7	100	67.478	Fundulus_heteroclitus
ENSGACG00000019618	larp7	94	69.091	ENSGMOG00000010536	larp7	99	57.581	Gadus_morhua
ENSGACG00000019618	larp7	80	72.527	ENSGALG00000012048	LARP7	96	53.093	Gallus_gallus
ENSGACG00000019618	larp7	93	76.389	ENSGAFG00000015400	larp7	100	67.188	Gambusia_affinis
ENSGACG00000019618	larp7	80	70.879	ENSGAGG00000024520	LARP7	96	52.479	Gopherus_agassizii
ENSGACG00000019618	larp7	86	49.008	ENSGGOG00000006438	-	95	50.000	Gorilla_gorilla
ENSGACG00000019618	larp7	80	70.492	ENSGGOG00000023567	-	97	52.560	Gorilla_gorilla
ENSGACG00000019618	larp7	93	80.000	ENSHBUG00000019223	larp7	100	71.057	Haplochromis_burtoni
ENSGACG00000019618	larp7	80	71.038	ENSHGLG00000002716	LARP7	99	51.010	Heterocephalus_glaber_female
ENSGACG00000019618	larp7	80	71.038	ENSHGLG00100000332	LARP7	99	51.010	Heterocephalus_glaber_male
ENSGACG00000019618	larp7	88	81.000	ENSHCOG00000000664	LARP7	97	65.836	Hippocampus_comes
ENSGACG00000019618	larp7	84	73.438	ENSIPUG00000019886	larp7	96	56.217	Ictalurus_punctatus
ENSGACG00000019618	larp7	80	71.038	ENSSTOG00000011789	LARP7	97	52.414	Ictidomys_tridecemlineatus
ENSGACG00000019618	larp7	80	71.038	ENSJJAG00000000257	-	99	51.581	Jaculus_jaculus
ENSGACG00000019618	larp7	94	74.884	ENSKMAG00000005057	larp7	100	65.278	Kryptolebias_marmoratus
ENSGACG00000019618	larp7	100	70.358	ENSLBEG00000020062	larp7	100	71.039	Labrus_bergylta
ENSGACG00000019618	larp7	91	77.885	ENSLBEG00000018789	-	90	77.885	Labrus_bergylta
ENSGACG00000019618	larp7	98	47.360	ENSLACG00000013744	LARP7	99	47.264	Latimeria_chalumnae
ENSGACG00000019618	larp7	100	49.427	ENSLOCG00000011608	larp7	100	49.427	Lepisosteus_oculatus
ENSGACG00000019618	larp7	80	71.038	ENSLAFG00000015769	LARP7	99	51.329	Loxodonta_africana
ENSGACG00000019618	larp7	80	70.492	ENSMFAG00000036506	LARP7	97	53.065	Macaca_fascicularis
ENSGACG00000019618	larp7	80	70.492	ENSMMUG00000017911	LARP7	97	53.065	Macaca_mulatta
ENSGACG00000019618	larp7	80	70.492	ENSMNEG00000034758	LARP7	97	53.065	Macaca_nemestrina
ENSGACG00000019618	larp7	80	70.492	ENSMLEG00000026154	LARP7	97	53.065	Mandrillus_leucophaeus
ENSGACG00000019618	larp7	95	80.365	ENSMAMG00000005835	larp7	100	72.837	Mastacembelus_armatus
ENSGACG00000019618	larp7	93	79.070	ENSMZEG00005002084	larp7	100	70.711	Maylandia_zebra
ENSGACG00000019618	larp7	80	72.527	ENSMGAG00000010947	LARP7	97	53.739	Meleagris_gallopavo
ENSGACG00000019618	larp7	79	71.667	ENSMAUG00000005625	-	98	43.058	Mesocricetus_auratus
ENSGACG00000019618	larp7	80	71.038	ENSMICG00000031035	LARP7	99	52.254	Microcebus_murinus
ENSGACG00000019618	larp7	89	48.803	ENSMOCG00000015761	-	100	49.355	Microtus_ochrogaster
ENSGACG00000019618	larp7	79	71.111	ENSMOCG00000012519	-	97	52.721	Microtus_ochrogaster
ENSGACG00000019618	larp7	99	73.043	ENSMMOG00000011816	larp7	94	73.043	Mola_mola
ENSGACG00000019618	larp7	80	72.131	ENSMODG00000005669	LARP7	97	54.545	Monodelphis_domestica
ENSGACG00000019618	larp7	91	82.692	ENSMALG00000009893	larp7	91	81.604	Monopterus_albus
ENSGACG00000019618	larp7	79	70.556	MGP_CAROLIEiJ_G0025613	-	88	65.306	Mus_caroli
ENSGACG00000019618	larp7	79	70.556	ENSMUSG00000027968	Larp7	88	70.423	Mus_musculus
ENSGACG00000019618	larp7	79	71.111	MGP_PahariEiJ_G0027060	-	99	51.495	Mus_pahari
ENSGACG00000019618	larp7	79	71.111	MGP_SPRETEiJ_G0026566	Larp7	88	66.327	Mus_spretus
ENSGACG00000019618	larp7	79	70.000	ENSMPUG00000018052	-	100	52.984	Mustela_putorius_furo
ENSGACG00000019618	larp7	80	71.585	ENSMPUG00000008331	-	97	54.530	Mustela_putorius_furo
ENSGACG00000019618	larp7	86	52.290	ENSMLUG00000027214	LARP7	99	51.440	Myotis_lucifugus
ENSGACG00000019618	larp7	80	71.429	ENSNGAG00000007368	-	99	50.993	Nannospalax_galili
ENSGACG00000019618	larp7	93	79.535	ENSNBRG00000007968	larp7	88	78.539	Neolamprologus_brichardi
ENSGACG00000019618	larp7	80	70.492	ENSNLEG00000016354	LARP7	95	52.821	Nomascus_leucogenys
ENSGACG00000019618	larp7	71	72.050	ENSMEUG00000004739	LARP7	100	51.331	Notamacropus_eugenii
ENSGACG00000019618	larp7	85	65.649	ENSOPRG00000009594	-	84	65.649	Ochotona_princeps
ENSGACG00000019618	larp7	80	71.038	ENSODEG00000011121	LARP7	96	51.792	Octodon_degus
ENSGACG00000019618	larp7	96	71.869	ENSONIG00000008763	larp7	100	71.057	Oreochromis_niloticus
ENSGACG00000019618	larp7	84	68.750	ENSOANG00000009298	LARP7	97	53.654	Ornithorhynchus_anatinus
ENSGACG00000019618	larp7	80	71.038	ENSOCUG00000007073	LARP7	97	51.801	Oryctolagus_cuniculus
ENSGACG00000019618	larp7	96	66.302	ENSORLG00000004978	larp7	100	65.225	Oryzias_latipes
ENSGACG00000019618	larp7	96	66.485	ENSORLG00020013825	larp7	100	65.112	Oryzias_latipes_hni
ENSGACG00000019618	larp7	80	78.142	ENSORLG00015011435	larp7	89	73.113	Oryzias_latipes_hsok
ENSGACG00000019618	larp7	100	66.493	ENSOMEG00000006920	larp7	100	66.493	Oryzias_melastigma
ENSGACG00000019618	larp7	80	71.038	ENSOGAG00000001643	LARP7	97	53.413	Otolemur_garnettii
ENSGACG00000019618	larp7	80	70.492	ENSOARG00000001809	LARP7	97	53.141	Ovis_aries
ENSGACG00000019618	larp7	80	70.492	ENSPPAG00000038420	LARP7	95	52.650	Pan_paniscus
ENSGACG00000019618	larp7	80	71.585	ENSPPRG00000023256	LARP7	97	53.596	Panthera_pardus
ENSGACG00000019618	larp7	80	71.585	ENSPTIG00000021146	LARP7	94	53.298	Panthera_tigris_altaica
ENSGACG00000019618	larp7	80	70.492	ENSPTRG00000016380	LARP7	97	52.560	Pan_troglodytes
ENSGACG00000019618	larp7	80	70.492	ENSPANG00000006701	LARP7	95	53.322	Papio_anubis
ENSGACG00000019618	larp7	86	76.923	ENSPKIG00000023484	larp7	96	60.279	Paramormyrops_kingsleyae
ENSGACG00000019618	larp7	88	69.500	ENSPSIG00000014419	LARP7	95	53.646	Pelodiscus_sinensis
ENSGACG00000019618	larp7	88	75.622	ENSPMGG00000019887	larp7	98	75.587	Periophthalmus_magnuspinnatus
ENSGACG00000019618	larp7	79	71.667	ENSPEMG00000013978	-	99	52.295	Peromyscus_maniculatus_bairdii
ENSGACG00000019618	larp7	97	37.522	ENSPMAG00000005362	larp7	94	37.699	Petromyzon_marinus
ENSGACG00000019618	larp7	80	72.131	ENSPCIG00000020284	LARP7	96	64.348	Phascolarctos_cinereus
ENSGACG00000019618	larp7	93	74.884	ENSPFOG00000000265	larp7	100	67.418	Poecilia_formosa
ENSGACG00000019618	larp7	93	75.349	ENSPLAG00000012181	larp7	100	67.591	Poecilia_latipinna
ENSGACG00000019618	larp7	93	75.349	ENSPMEG00000007182	larp7	100	67.591	Poecilia_mexicana
ENSGACG00000019618	larp7	93	75.926	ENSPREG00000019513	larp7	100	66.724	Poecilia_reticulata
ENSGACG00000019618	larp7	80	70.492	ENSPPYG00000015010	LARP7	97	52.389	Pongo_abelii
ENSGACG00000019618	larp7	76	75.510	ENSPCOG00000023946	LARP7	97	46.691	Propithecus_coquereli
ENSGACG00000019618	larp7	90	66.346	ENSPVAG00000000282	LARP7	99	52.087	Pteropus_vampyrus
ENSGACG00000019618	larp7	93	79.535	ENSPNYG00000023801	larp7	88	78.539	Pundamilia_nyererei
ENSGACG00000019618	larp7	80	73.770	ENSPNAG00000017554	larp7	97	58.290	Pygocentrus_nattereri
ENSGACG00000019618	larp7	79	71.111	ENSRNOG00000048989	Larp7	96	52.705	Rattus_norvegicus
ENSGACG00000019618	larp7	80	70.492	ENSRBIG00000031916	LARP7	95	49.784	Rhinopithecus_bieti
ENSGACG00000019618	larp7	80	70.492	ENSRROG00000033414	LARP7	97	53.322	Rhinopithecus_roxellana
ENSGACG00000019618	larp7	80	70.492	ENSSBOG00000030886	-	99	52.318	Saimiri_boliviensis_boliviensis
ENSGACG00000019618	larp7	95	41.049	ENSSBOG00000022652	-	97	40.675	Saimiri_boliviensis_boliviensis
ENSGACG00000019618	larp7	80	72.131	ENSSHAG00000008153	LARP7	96	53.436	Sarcophilus_harrisii
ENSGACG00000019618	larp7	89	70.443	ENSSFOG00015019344	larp7	96	56.863	Scleropages_formosus
ENSGACG00000019618	larp7	94	82.488	ENSSMAG00000011296	larp7	100	73.875	Scophthalmus_maximus
ENSGACG00000019618	larp7	100	74.870	ENSSDUG00000007045	larp7	100	74.870	Seriola_dumerili
ENSGACG00000019618	larp7	94	81.106	ENSSLDG00000005128	larp7	98	81.106	Seriola_lalandi_dorsalis
ENSGACG00000019618	larp7	94	81.567	ENSSPAG00000016066	larp7	100	72.145	Stegastes_partitus
ENSGACG00000019618	larp7	80	71.038	ENSSSCG00000009119	LARP7	97	51.541	Sus_scrofa
ENSGACG00000019618	larp7	80	72.527	ENSTGUG00000001804	LARP7	97	54.467	Taeniopygia_guttata
ENSGACG00000019618	larp7	92	75.714	ENSTRUG00000004996	larp7	99	63.700	Takifugu_rubripes
ENSGACG00000019618	larp7	98	64.017	ENSTNIG00000007183	larp7	100	56.463	Tetraodon_nigroviridis
ENSGACG00000019618	larp7	80	69.945	ENSTBEG00000009188	LARP7	97	51.724	Tupaia_belangeri
ENSGACG00000019618	larp7	90	50.558	ENSTTRG00000005233	LARP7	99	50.667	Tursiops_truncatus
ENSGACG00000019618	larp7	80	71.585	ENSUAMG00000000836	LARP7	97	54.003	Ursus_americanus
ENSGACG00000019618	larp7	80	71.585	ENSUMAG00000002263	LARP7	95	53.633	Ursus_maritimus
ENSGACG00000019618	larp7	80	71.038	ENSVPAG00000010502	LARP7	97	52.721	Vicugna_pacos
ENSGACG00000019618	larp7	80	71.038	ENSVVUG00000002274	LARP7	97	53.596	Vulpes_vulpes
ENSGACG00000019618	larp7	83	72.632	ENSXETG00000024097	larp7	96	54.974	Xenopus_tropicalis
ENSGACG00000019618	larp7	93	74.419	ENSXCOG00000004883	larp7	99	74.419	Xiphophorus_couchianus
ENSGACG00000019618	larp7	95	73.636	ENSXMAG00000008479	larp7	100	66.782	Xiphophorus_maculatus