EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019767 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3093 bases
Position: chrgroupIV:29854401-29857493
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026130	MMR_HSR1	PF01926.23	3.1e-10	1	1
ENSGACP00000026128	MMR_HSR1	PF01926.23	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000026179	-	1678	-	ENSGACP00000026128	214 (aa)	-	G3Q8B4
ENSGACT00000026181	-	594	-	ENSGACP00000026130	198 (aa)	-	G3Q8B6

Gene Model

Click here to download ENSGACG00000019767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019767	-	84	34.884	ENSGACG00000014678	rab36	64	34.884
ENSGACG00000019767	-	63	31.746	ENSGACG00000012267	arl8ba	65	31.746
ENSGACG00000019767	-	83	44.848	ENSGACG00000007722	rab15	90	45.638
ENSGACG00000019767	-	83	40.606	ENSGACG00000020356	rab6a	79	40.606
ENSGACG00000019767	-	86	64.674	ENSGACG00000013611	-	90	64.674
ENSGACG00000019767	-	80	37.654	ENSGACG00000001950	RAB39B	75	37.654
ENSGACG00000019767	-	79	36.709	ENSGACG00000016639	rab12	74	36.646
ENSGACG00000019767	-	83	40.698	ENSGACG00000003726	rab6ba	80	40.698
ENSGACG00000019767	-	94	35.678	ENSGACG00000013249	rab25b	96	35.294
ENSGACG00000019767	-	95	36.082	ENSGACG00000019540	rab33ba	88	36.082
ENSGACG00000019767	-	90	37.113	ENSGACG00000008659	rab5c	85	37.113
ENSGACG00000019767	-	82	34.756	ENSGACG00000001694	rab18a	78	34.756
ENSGACG00000019767	-	83	41.212	ENSGACG00000017153	rab41	78	41.212
ENSGACG00000019767	-	87	37.572	ENSGACG00000014915	si:dkey-16l2.16	77	36.970
ENSGACG00000019767	-	82	37.195	ENSGACG00000016395	rab18b	80	37.195
ENSGACG00000019767	-	84	40.237	ENSGACG00000013401	zgc:171927	81	40.373
ENSGACG00000019767	-	79	30.818	ENSGACG00000003710	arl4d	77	30.818
ENSGACG00000019767	-	94	31.884	ENSGACG00000020514	rab34b	79	31.884
ENSGACG00000019767	-	79	31.210	ENSGACG00000016680	rheb	85	31.210
ENSGACG00000019767	-	60	33.058	ENSGACG00000000500	-	62	33.058
ENSGACG00000019767	-	94	38.462	ENSGACG00000004997	rab5aa	90	38.462
ENSGACG00000019767	-	81	40.373	ENSGACG00000003864	rab1ab	79	40.373
ENSGACG00000019767	-	94	30.808	ENSGACG00000018291	rab9b	97	30.808
ENSGACG00000019767	-	95	35.025	ENSGACG00000013548	rab35b	98	37.056
ENSGACG00000019767	-	90	40.331	ENSGACG00000013721	rab6bb	85	40.331
ENSGACG00000019767	-	86	40.000	ENSGACG00000011925	rab13	84	40.000
ENSGACG00000019767	-	79	38.462	ENSGACG00000004965	rab25a	75	38.462
ENSGACG00000019767	-	74	37.748	ENSGACG00000018745	rab33a	68	36.646
ENSGACG00000019767	-	75	36.538	ENSGACG00000018711	rasl11a	64	36.538
ENSGACG00000019767	-	88	37.640	ENSGACG00000015479	rab11bb	82	37.640
ENSGACG00000019767	-	83	30.120	ENSGACG00000000729	rhebl1	89	30.120
ENSGACG00000019767	-	77	39.869	ENSGACG00000013259	rab11al	71	39.869
ENSGACG00000019767	-	59	32.479	ENSGACG00000011972	arl8bb	68	32.479
ENSGACG00000019767	-	83	45.509	ENSGACG00000005397	si:ch211-247i17.1	95	45.509
ENSGACG00000019767	-	81	32.919	ENSGACG00000005608	rab22a	83	32.919
ENSGACG00000019767	-	91	34.426	ENSGACG00000020437	-	90	34.426
ENSGACG00000019767	-	83	34.524	ENSGACG00000011190	rab34a	63	34.524
ENSGACG00000019767	-	85	31.176	ENSGACG00000006151	rab23	77	33.516
ENSGACG00000019767	-	74	40.541	ENSGACG00000001725	zgc:101559	64	40.541
ENSGACG00000019767	-	85	36.782	ENSGACG00000009647	RAB7A	84	36.782
ENSGACG00000019767	-	91	40.884	ENSGACG00000005979	RAB15	87	40.659
ENSGACG00000019767	-	89	35.165	ENSGACG00000000807	-	87	35.165
ENSGACG00000019767	-	84	42.857	ENSGACG00000016164	rab4a	77	42.857
ENSGACG00000019767	-	81	34.375	ENSGACG00000016799	-	98	33.728
ENSGACG00000019767	-	99	34.375	ENSGACG00000006162	-	99	34.375
ENSGACG00000019767	-	81	40.994	ENSGACG00000000789	rab1ba	79	40.994
ENSGACG00000019767	-	83	33.918	ENSGACG00000011607	rab32b	84	32.796
ENSGACG00000019767	-	88	35.385	ENSGACG00000014905	rab2a	91	35.385
ENSGACG00000019767	-	80	33.333	ENSGACG00000019134	si:cabz01085950.1	80	33.333
ENSGACG00000019767	-	95	36.019	ENSGACG00000018847	-	94	36.019
ENSGACG00000019767	-	95	32.161	ENSGACG00000003972	rab9a	96	32.161
ENSGACG00000019767	-	97	38.579	ENSGACG00000012006	rab30	97	38.579
ENSGACG00000019767	-	81	40.373	ENSGACG00000019642	-	79	40.373
ENSGACG00000019767	-	88	36.517	ENSGACG00000013297	-	81	36.517
ENSGACG00000019767	-	84	36.994	ENSGACG00000010473	RAB29	81	36.994
ENSGACG00000019767	-	94	33.163	ENSGACG00000014578	RAB9A	98	33.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019767	-	93	49.479	ENSACAG00000016658	-	99	49.479	Anolis_carolinensis
ENSGACG00000019767	-	69	48.966	ENSETEG00000008991	-	94	48.966	Echinops_telfairi
ENSGACG00000019767	-	96	50.526	ENSFALG00000003276	-	90	50.526	Ficedula_albicollis
ENSGACG00000019767	-	100	78.505	ENSGMOG00000018741	-	100	78.505	Gadus_morhua
ENSGACG00000019767	-	78	51.299	ENSLAFG00000000202	-	88	51.299	Loxodonta_africana
ENSGACG00000019767	-	95	46.154	ENSMGAG00000002516	-	92	46.154	Meleagris_gallopavo
ENSGACG00000019767	-	96	47.396	ENSMUSG00000064147	Rab44	66	50.867	Mus_musculus
ENSGACG00000019767	-	99	46.009	ENSMPUG00000014188	-	84	46.009	Mustela_putorius_furo
ENSGACG00000019767	-	69	53.676	ENSMLUG00000010706	-	81	50.323	Myotis_lucifugus
ENSGACG00000019767	-	69	52.083	ENSMEUG00000004712	-	96	52.083	Notamacropus_eugenii
ENSGACG00000019767	-	52	47.748	ENSOPRG00000006034	-	93	47.748	Ochotona_princeps
ENSGACG00000019767	-	82	91.975	ENSONIG00000011542	-	100	91.975	Oreochromis_niloticus
ENSGACG00000019767	-	78	56.774	ENSPSIG00000002522	-	100	56.774	Pelodiscus_sinensis
ENSGACG00000019767	-	69	51.389	ENSPVAG00000014624	-	94	51.389	Pteropus_vampyrus
ENSGACG00000019767	-	98	50.515	ENSTGUG00000017468	-	95	48.585	Taeniopygia_guttata
ENSGACG00000019767	-	82	65.432	ENSTNIG00000008784	-	100	65.432	Tetraodon_nigroviridis
ENSGACG00000019767	-	83	87.879	ENSTNIG00000001448	-	98	87.879	Tetraodon_nigroviridis