EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000019980 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9477 bases
Position: chrgroupVII:9246691-9256167
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026397	RRM_5	PF13893.6	4.6e-08	1	2
ENSGACP00000026397	RRM_5	PF13893.6	4.6e-08	2	2
ENSGACP00000026394	RRM_5	PF13893.6	8e-08	1	2
ENSGACP00000026394	RRM_5	PF13893.6	8e-08	2	2
ENSGACP00000026394	RRM_1	PF00076.22	3.7e-26	1	2
ENSGACP00000026394	RRM_1	PF00076.22	3.7e-26	2	2
ENSGACP00000026397	RRM_1	PF00076.22	2.3e-25	1	2
ENSGACP00000026397	RRM_1	PF00076.22	2.3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000026445	-	1328	-	ENSGACP00000026394	424 (aa)	-	G3Q930
ENSGACT00000026448	-	1697	-	ENSGACP00000026397	345 (aa)	-	G3Q933

Gene Model

Click here to download ENSGACG00000019980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000019980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000019980	rbm4.3	89	48.315	ENSGACG00000000822	rbm4.1	85	52.679
ENSGACG00000019980	rbm4.3	51	37.288	ENSGACG00000019028	rbm14b	78	37.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000019980	rbm4.3	95	65.103	ENSAPOG00000002953	rbm4.3	97	65.103	Acanthochromis_polyacanthus
ENSGACG00000019980	rbm4.3	100	76.657	ENSAPOG00000002991	rbm4.3	96	81.776	Acanthochromis_polyacanthus
ENSGACG00000019980	rbm4.3	95	61.739	ENSACIG00000021311	-	96	62.463	Amphilophus_citrinellus
ENSGACG00000019980	rbm4.3	100	76.857	ENSACIG00000021295	rbm4.3	100	76.000	Amphilophus_citrinellus
ENSGACG00000019980	rbm4.3	95	65.294	ENSAOCG00000008015	rbm4.3	94	88.276	Amphiprion_ocellaris
ENSGACG00000019980	rbm4.3	100	75.358	ENSAOCG00000007992	rbm4.3	100	74.212	Amphiprion_ocellaris
ENSGACG00000019980	rbm4.3	95	66.077	ENSAPEG00000017324	rbm4.3	97	64.897	Amphiprion_percula
ENSGACG00000019980	rbm4.3	100	75.645	ENSAPEG00000017288	rbm4.3	100	74.212	Amphiprion_percula
ENSGACG00000019980	rbm4.3	100	76.724	ENSATEG00000019395	rbm4.3	96	82.407	Anabas_testudineus
ENSGACG00000019980	rbm4.3	77	90.345	ENSATEG00000019375	rbm4.3	94	90.345	Anabas_testudineus
ENSGACG00000019980	rbm4.3	95	63.050	ENSACLG00000010620	-	94	78.082	Astatotilapia_calliptera
ENSGACG00000019980	rbm4.3	100	77.714	ENSACLG00000010642	rbm4.3	99	80.275	Astatotilapia_calliptera
ENSGACG00000019980	rbm4.3	52	73.743	ENSAMXG00000040224	rbm4.3	73	71.508	Astyanax_mexicanus
ENSGACG00000019980	rbm4.3	99	59.831	ENSCSEG00000013659	rbm4.3	92	75.735	Cynoglossus_semilaevis
ENSGACG00000019980	rbm4.3	100	72.805	ENSCVAG00000008502	rbm4.3	99	77.027	Cyprinodon_variegatus
ENSGACG00000019980	rbm4.3	95	60.933	ENSCVAG00000008508	rbm4.3	94	74.444	Cyprinodon_variegatus
ENSGACG00000019980	rbm4.3	98	63.401	ENSDARG00000022129	rbm4.3	99	63.714	Danio_rerio
ENSGACG00000019980	rbm4.3	99	62.745	ENSELUG00000022155	rbm4.3	91	74.033	Esox_lucius
ENSGACG00000019980	rbm4.3	99	65.730	ENSELUG00000022150	rbm4.3	97	65.015	Esox_lucius
ENSGACG00000019980	rbm4.3	99	66.952	ENSELUG00000022168	rbm4.3	94	81.283	Esox_lucius
ENSGACG00000019980	rbm4.3	100	70.914	ENSFHEG00000023096	rbm4.3	100	71.191	Fundulus_heteroclitus
ENSGACG00000019980	rbm4.3	78	65.818	ENSFHEG00000023137	rbm4.3	81	80.769	Fundulus_heteroclitus
ENSGACG00000019980	rbm4.3	61	76.777	ENSGMOG00000004032	rbm4.3	63	59.107	Gadus_morhua
ENSGACG00000019980	rbm4.3	95	68.862	ENSGAFG00000001935	rbm4.3	100	76.471	Gambusia_affinis
ENSGACG00000019980	rbm4.3	100	77.429	ENSHBUG00000009051	rbm4.3	99	80.275	Haplochromis_burtoni
ENSGACG00000019980	rbm4.3	95	63.050	ENSHBUG00000009020	-	94	78.082	Haplochromis_burtoni
ENSGACG00000019980	rbm4.3	100	64.589	ENSHCOG00000010363	rbm4.3	99	65.537	Hippocampus_comes
ENSGACG00000019980	rbm4.3	94	62.908	ENSHCOG00000010349	rbm4.3	99	60.563	Hippocampus_comes
ENSGACG00000019980	rbm4.3	95	61.765	ENSIPUG00000022943	RBM4B	96	62.647	Ictalurus_punctatus
ENSGACG00000019980	rbm4.3	99	57.550	ENSKMAG00000017468	rbm4.3	91	71.667	Kryptolebias_marmoratus
ENSGACG00000019980	rbm4.3	95	64.535	ENSLBEG00000001071	-	97	64.223	Labrus_bergylta
ENSGACG00000019980	rbm4.3	54	77.778	ENSLBEG00000001025	rbm4.3	85	77.957	Labrus_bergylta
ENSGACG00000019980	rbm4.3	94	54.121	ENSLOCG00000002755	rbm4.3	89	63.736	Lepisosteus_oculatus
ENSGACG00000019980	rbm4.3	100	74.352	ENSMAMG00000004701	rbm4.3	96	79.907	Mastacembelus_armatus
ENSGACG00000019980	rbm4.3	77	88.966	ENSMAMG00000004715	-	79	88.966	Mastacembelus_armatus
ENSGACG00000019980	rbm4.3	95	59.531	ENSMZEG00005007417	-	94	78.082	Maylandia_zebra
ENSGACG00000019980	rbm4.3	83	80.345	ENSMZEG00005007441	rbm4.3	79	81.193	Maylandia_zebra
ENSGACG00000019980	rbm4.3	100	77.714	ENSMZEG00005028540	rbm4.3	99	80.275	Maylandia_zebra
ENSGACG00000019980	rbm4.3	82	61.149	ENSMZEG00005028537	-	85	67.081	Maylandia_zebra
ENSGACG00000019980	rbm4.3	100	73.219	ENSMMOG00000012191	rbm4.3	100	72.650	Mola_mola
ENSGACG00000019980	rbm4.3	92	75.862	ENSMALG00000015014	-	90	82.162	Monopterus_albus
ENSGACG00000019980	rbm4.3	89	75.161	ENSMALG00000003032	rbm4.3	89	82.162	Monopterus_albus
ENSGACG00000019980	rbm4.3	83	67.568	ENSMALG00000003001	rbm4.3	81	88.172	Monopterus_albus
ENSGACG00000019980	rbm4.3	100	77.937	ENSNBRG00000012372	rbm4.3	100	77.077	Neolamprologus_brichardi
ENSGACG00000019980	rbm4.3	100	77.429	ENSONIG00000018378	rbm4.3	100	76.857	Oreochromis_niloticus
ENSGACG00000019980	rbm4.3	95	63.050	ENSONIG00000018380	-	94	78.082	Oreochromis_niloticus
ENSGACG00000019980	rbm4.3	95	59.078	ENSORLG00000012473	rbm4.3	91	67.568	Oryzias_latipes
ENSGACG00000019980	rbm4.3	100	64.857	ENSORLG00000024749	rbm4.3	100	65.143	Oryzias_latipes
ENSGACG00000019980	rbm4.3	95	57.803	ENSORLG00000011589	rbm4.3	96	59.078	Oryzias_latipes
ENSGACG00000019980	rbm4.3	100	64.286	ENSORLG00020012482	rbm4.3	100	64.571	Oryzias_latipes_hni
ENSGACG00000019980	rbm4.3	95	58.092	ENSORLG00020012474	rbm4.3	96	58.790	Oryzias_latipes_hni
ENSGACG00000019980	rbm4.3	95	59.078	ENSORLG00020012464	rbm4.3	91	67.568	Oryzias_latipes_hni
ENSGACG00000019980	rbm4.3	95	57.514	ENSORLG00015013698	rbm4.3	96	59.078	Oryzias_latipes_hsok
ENSGACG00000019980	rbm4.3	95	58.790	ENSORLG00015013686	rbm4.3	91	67.027	Oryzias_latipes_hsok
ENSGACG00000019980	rbm4.3	100	64.000	ENSORLG00015013721	rbm4.3	100	64.571	Oryzias_latipes_hsok
ENSGACG00000019980	rbm4.3	99	59.669	ENSOMEG00000005918	rbm4.3	94	62.727	Oryzias_melastigma
ENSGACG00000019980	rbm4.3	100	68.571	ENSOMEG00000005950	rbm4.3	100	67.143	Oryzias_melastigma
ENSGACG00000019980	rbm4.3	95	58.621	ENSOMEG00000005929	rbm4.3	96	59.195	Oryzias_melastigma
ENSGACG00000019980	rbm4.3	91	64.634	ENSPKIG00000007001	rbm4.3	97	62.018	Paramormyrops_kingsleyae
ENSGACG00000019980	rbm4.3	100	70.308	ENSPLAG00000006077	rbm4.3	99	73.778	Poecilia_latipinna
ENSGACG00000019980	rbm4.3	99	59.218	ENSPLAG00000006131	rbm4.3	91	71.942	Poecilia_latipinna
ENSGACG00000019980	rbm4.3	95	60.756	ENSPMEG00000024263	rbm4.3	96	58.017	Poecilia_mexicana
ENSGACG00000019980	rbm4.3	100	70.506	ENSPMEG00000024260	rbm4.3	99	75.000	Poecilia_mexicana
ENSGACG00000019980	rbm4.3	99	59.218	ENSPMEG00000024271	rbm4.3	91	71.667	Poecilia_mexicana
ENSGACG00000019980	rbm4.3	99	57.955	ENSPREG00000002156	rbm4.3	96	55.425	Poecilia_reticulata
ENSGACG00000019980	rbm4.3	100	69.944	ENSPREG00000002093	-	99	75.446	Poecilia_reticulata
ENSGACG00000019980	rbm4.3	100	77.208	ENSPNYG00000018564	rbm4.3	99	79.909	Pundamilia_nyererei
ENSGACG00000019980	rbm4.3	95	63.050	ENSPNYG00000018541	rbm4.3	94	78.082	Pundamilia_nyererei
ENSGACG00000019980	rbm4.3	99	63.636	ENSPNAG00000013053	rbm4.3	97	65.043	Pygocentrus_nattereri
ENSGACG00000019980	rbm4.3	99	59.016	ENSSFOG00015015563	rbm4.3	89	71.508	Scleropages_formosus
ENSGACG00000019980	rbm4.3	95	62.941	ENSSMAG00000013644	rbm4.3	97	63.235	Scophthalmus_maximus
ENSGACG00000019980	rbm4.3	100	74.785	ENSSMAG00000013653	rbm4.3	96	79.724	Scophthalmus_maximus
ENSGACG00000019980	rbm4.3	100	77.011	ENSSDUG00000018422	rbm4.3	100	77.011	Seriola_dumerili
ENSGACG00000019980	rbm4.3	77	89.655	ENSSDUG00000018435	rbm4.3	94	89.655	Seriola_dumerili
ENSGACG00000019980	rbm4.3	100	76.724	ENSSLDG00000017182	rbm4.3	100	76.724	Seriola_lalandi_dorsalis
ENSGACG00000019980	rbm4.3	77	89.655	ENSSLDG00000017204	rbm4.3	94	89.655	Seriola_lalandi_dorsalis
ENSGACG00000019980	rbm4.3	100	76.012	ENSSPAG00000008041	rbm4.3	85	76.301	Stegastes_partitus
ENSGACG00000019980	rbm4.3	99	64.689	ENSSPAG00000008062	rbm4.3	94	86.207	Stegastes_partitus
ENSGACG00000019980	rbm4.3	99	64.607	ENSTRUG00000020901	rbm4.3	91	76.119	Takifugu_rubripes
ENSGACG00000019980	rbm4.3	100	74.000	ENSTRUG00000023874	rbm4.3	96	80.184	Takifugu_rubripes
ENSGACG00000019980	rbm4.3	99	62.429	ENSTNIG00000005668	rbm4.3	94	73.889	Tetraodon_nigroviridis
ENSGACG00000019980	rbm4.3	95	60.174	ENSXCOG00000006001	rbm4.3	91	72.778	Xiphophorus_couchianus
ENSGACG00000019980	rbm4.3	95	71.217	ENSXCOG00000005996	rbm4.3	97	75.225	Xiphophorus_couchianus
ENSGACG00000019980	rbm4.3	95	70.796	ENSXMAG00000025173	rbm4.3	99	74.554	Xiphophorus_maculatus
ENSGACG00000019980	rbm4.3	95	60.174	ENSXMAG00000021997	rbm4.3	91	72.778	Xiphophorus_maculatus
ENSGACG00000019980	rbm4.3	99	59.777	ENSXMAG00000011698	rbm4.3	91	72.222	Xiphophorus_maculatus