EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000020055 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
1033 bases
Position
chrgroupIV:32244029-32245061
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000026497LSMPF01423.221.5e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000026548-258-ENSGACP0000002649785 (aa)-G3Q9D2
Gene Model
Click here to download ENSGACG00000020055's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020055's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000020055snrpf7850.000ENSGACG00000017223lsm68350.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000020055snrpf10096.471ENSG00000139343SNRPF9996.471Homo_sapiens
ENSGACG00000020055snrpf10098.824ENSAPOG00000003377snrpf6698.824Acanthochromis_polyacanthus
ENSGACG00000020055snrpf10096.471ENSAMEG00000002166-10096.471Ailuropoda_melanoleuca
ENSGACG00000020055snrpf8882.667ENSAMEG00000018718-8683.784Ailuropoda_melanoleuca
ENSGACG00000020055snrpf9998.810ENSACIG00000013216snrpf9998.810Amphilophus_citrinellus
ENSGACG00000020055snrpf9998.810ENSAOCG00000015108snrpf9998.810Amphiprion_ocellaris
ENSGACG00000020055snrpf9998.810ENSAPEG00000022022snrpf9998.810Amphiprion_percula
ENSGACG00000020055snrpf9998.810ENSATEG00000022625snrpf9098.810Anabas_testudineus
ENSGACG00000020055snrpf8794.595ENSACAG00000014073SNRPF8594.595Anolis_carolinensis
ENSGACG00000020055snrpf8490.141ENSANAG00000020297-6590.141Aotus_nancymaae
ENSGACG00000020055snrpf10096.471ENSANAG00000032845SNRPF9996.471Aotus_nancymaae
ENSGACG00000020055snrpf8766.216ENSANAG00000025860-8366.216Aotus_nancymaae
ENSGACG00000020055snrpf9998.810ENSACLG00000016066snrpf9998.810Astatotilapia_calliptera
ENSGACG00000020055snrpf10098.824ENSAMXG00000007421snrpf9998.824Astyanax_mexicanus
ENSGACG00000020055snrpf9190.909ENSBTAG00000050012-9190.541Bos_taurus
ENSGACG00000020055snrpf10096.471ENSBTAG00000016271SNRPF9996.471Bos_taurus
ENSGACG00000020055snrpf9170.130WBGene00004918snr-58572.222Caenorhabditis_elegans
ENSGACG00000020055snrpf10096.471ENSCJAG00000002705-9996.471Callithrix_jacchus
ENSGACG00000020055snrpf8490.141ENSCAFG00000031151-8590.411Canis_familiaris
ENSGACG00000020055snrpf10096.471ENSCAFG00000006395-7796.471Canis_familiaris
ENSGACG00000020055snrpf8490.141ENSCAFG00020010823-8590.411Canis_lupus_dingo
ENSGACG00000020055snrpf9284.615ENSCAFG00020013161-7492.857Canis_lupus_dingo
ENSGACG00000020055snrpf9590.123ENSTSYG00000031636-6191.781Carlito_syrichta
ENSGACG00000020055snrpf8782.432ENSTSYG00000030635-8682.432Carlito_syrichta
ENSGACG00000020055snrpf8790.667ENSTSYG00000036502-8690.667Carlito_syrichta
ENSGACG00000020055snrpf10096.471ENSCAPG00000007242SNRPF10096.471Cavia_aperea
ENSGACG00000020055snrpf10096.471ENSCPOG00000013898SNRPF9996.471Cavia_porcellus
ENSGACG00000020055snrpf10095.294ENSCCAG00000017356-8695.946Cebus_capucinus
ENSGACG00000020055snrpf9986.905ENSCCAG00000033627-5787.671Cebus_capucinus
ENSGACG00000020055snrpf10096.471ENSCCAG00000037378-9996.471Cebus_capucinus
ENSGACG00000020055snrpf10096.471ENSCLAG00000007200SNRPF9996.471Chinchilla_lanigera
ENSGACG00000020055snrpf10096.471ENSCSAG00000003602-6996.471Chlorocebus_sabaeus
ENSGACG00000020055snrpf7495.238ENSCHOG00000009392SNRPF9895.238Choloepus_hoffmanni
ENSGACG00000020055snrpf10084.706ENSCPBG00000001985-8886.486Chrysemys_picta_bellii
ENSGACG00000020055snrpf8787.838ENSCPBG00000006227-8687.838Chrysemys_picta_bellii
ENSGACG00000020055snrpf10087.059ENSCPBG00000026463-8687.838Chrysemys_picta_bellii
ENSGACG00000020055snrpf10090.588ENSCPBG00000024287-6091.892Chrysemys_picta_bellii
ENSGACG00000020055snrpf10085.882ENSCSAVG00000007498-8487.838Ciona_savignyi
ENSGACG00000020055snrpf10096.471ENSCGRG00001017100-9996.471Cricetulus_griseus_chok1gshd
ENSGACG00000020055snrpf8689.041ENSCGRG00001008965-5789.041Cricetulus_griseus_chok1gshd
ENSGACG00000020055snrpf9289.744ENSCGRG00000018878-9189.041Cricetulus_griseus_crigri
ENSGACG00000020055snrpf10096.471ENSCGRG00000000336-9996.471Cricetulus_griseus_crigri
ENSGACG00000020055snrpf10097.647ENSCSEG00000004748snrpf9997.647Cynoglossus_semilaevis
ENSGACG00000020055snrpf10098.824ENSCVAG00000000397snrpf6798.824Cyprinodon_variegatus
ENSGACG00000020055snrpf10096.552ENSDARG00000105037snrpf9996.552Danio_rerio
ENSGACG00000020055snrpf10096.471ENSDNOG00000043775-5496.471Dasypus_novemcinctus
ENSGACG00000020055snrpf8794.595ENSDNOG00000048989-6694.595Dasypus_novemcinctus
ENSGACG00000020055snrpf8779.730ENSDNOG00000049373-6479.730Dasypus_novemcinctus
ENSGACG00000020055snrpf8487.324ENSDORG00000025351-9987.324Dipodomys_ordii
ENSGACG00000020055snrpf6993.220ENSDORG00000029740-7293.220Dipodomys_ordii
ENSGACG00000020055snrpf9976.190FBgn0000426SmF8379.452Drosophila_melanogaster
ENSGACG00000020055snrpf10096.471ENSETEG00000001558-9996.471Echinops_telfairi
ENSGACG00000020055snrpf9674.390ENSEBUG00000001793-7285.075Eptatretus_burgeri
ENSGACG00000020055snrpf10096.471ENSECAG00000019817SNRPF6996.471Equus_caballus
ENSGACG00000020055snrpf10096.471ENSEEUG00000013509SNRPF10096.471Erinaceus_europaeus
ENSGACG00000020055snrpf10098.824ENSELUG00000003121RUXF9998.824Esox_lucius
ENSGACG00000020055snrpf10095.294ENSELUG00000007737RUXF8597.297Esox_lucius
ENSGACG00000020055snrpf10096.471ENSFCAG00000029966-9996.471Felis_catus
ENSGACG00000020055snrpf9875.904ENSFCAG00000031148-7174.026Felis_catus
ENSGACG00000020055snrpf8772.973ENSFCAG00000021942-8572.973Felis_catus
ENSGACG00000020055snrpf10096.471ENSFALG00000010799SNRPF9996.471Ficedula_albicollis
ENSGACG00000020055snrpf10096.471ENSFDAG00000002831-9996.471Fukomys_damarensis
ENSGACG00000020055snrpf10098.824ENSFHEG00000003240snrpf7598.824Fundulus_heteroclitus
ENSGACG00000020055snrpf10098.824ENSGMOG00000007741snrpf10098.824Gadus_morhua
ENSGACG00000020055snrpf10096.471ENSGALG00000011409SNRPF9996.471Gallus_gallus
ENSGACG00000020055snrpf9998.810ENSGAFG00000016187snrpf9798.810Gambusia_affinis
ENSGACG00000020055snrpf8789.189ENSGAGG00000012945-6890.541Gopherus_agassizii
ENSGACG00000020055snrpf9388.608ENSGAGG00000022991-8091.176Gopherus_agassizii
ENSGACG00000020055snrpf7186.667ENSGAGG00000011163-8689.796Gopherus_agassizii
ENSGACG00000020055snrpf8082.353ENSGAGG00000014132-8282.353Gopherus_agassizii
ENSGACG00000020055snrpf7492.063ENSGAGG00000020974-5392.063Gopherus_agassizii
ENSGACG00000020055snrpf10096.471ENSGGOG00000001127-9996.471Gorilla_gorilla
ENSGACG00000020055snrpf9273.077ENSGGOG00000039564-8971.622Gorilla_gorilla
ENSGACG00000020055snrpf9877.108ENSGGOG00000039936-8274.324Gorilla_gorilla
ENSGACG00000020055snrpf8794.595ENSHGLG00000021172-8694.595Heterocephalus_glaber_female
ENSGACG00000020055snrpf10096.471ENSHGLG00000009108SNRPF9996.471Heterocephalus_glaber_female
ENSGACG00000020055snrpf8794.595ENSHGLG00100019596-8694.595Heterocephalus_glaber_male
ENSGACG00000020055snrpf10096.471ENSHGLG00100008103-10096.471Heterocephalus_glaber_male
ENSGACG00000020055snrpf7487.143ENSHCOG00000018663snrpf5587.143Hippocampus_comes
ENSGACG00000020055snrpf10098.824ENSIPUG00000018994snrpf9998.824Ictalurus_punctatus
ENSGACG00000020055snrpf10096.471ENSSTOG00000010434-9996.471Ictidomys_tridecemlineatus
ENSGACG00000020055snrpf10081.176ENSJJAG00000010502-8882.432Jaculus_jaculus
ENSGACG00000020055snrpf10077.647ENSJJAG00000004558-8878.378Jaculus_jaculus
ENSGACG00000020055snrpf7989.552ENSJJAG00000004828-8691.071Jaculus_jaculus
ENSGACG00000020055snrpf10096.471ENSJJAG00000011272-9996.471Jaculus_jaculus
ENSGACG00000020055snrpf9998.810ENSKMAG00000013566snrpf9898.810Kryptolebias_marmoratus
ENSGACG00000020055snrpf10097.647ENSLBEG00000008800snrpf9997.647Labrus_bergylta
ENSGACG00000020055snrpf10096.471ENSLACG00000002456-7396.471Latimeria_chalumnae
ENSGACG00000020055snrpf10098.824ENSLOCG00000015744snrpf9998.824Lepisosteus_oculatus
ENSGACG00000020055snrpf10096.471ENSLAFG00000017426SNRPF9996.471Loxodonta_africana
ENSGACG00000020055snrpf9997.619ENSMAMG00000016593snrpf9997.619Mastacembelus_armatus
ENSGACG00000020055snrpf9998.810ENSMZEG00005014701snrpf9998.810Maylandia_zebra
ENSGACG00000020055snrpf9996.429ENSMGAG00000011453-7696.429Meleagris_gallopavo
ENSGACG00000020055snrpf7495.238ENSMAUG00000016909-8595.238Mesocricetus_auratus
ENSGACG00000020055snrpf7495.238ENSMAUG00000019737-8595.238Mesocricetus_auratus
ENSGACG00000020055snrpf7288.525ENSMAUG00000010289-6692.000Mesocricetus_auratus
ENSGACG00000020055snrpf8791.892ENSMAUG00000008799-8691.892Mesocricetus_auratus
ENSGACG00000020055snrpf8789.189ENSMICG00000030494-5989.189Microcebus_murinus
ENSGACG00000020055snrpf10096.471ENSMICG00000012153-9996.471Microcebus_murinus
ENSGACG00000020055snrpf8079.412ENSMOCG00000020220-8779.412Microtus_ochrogaster
ENSGACG00000020055snrpf8782.432ENSMOCG00000022166-8182.432Microtus_ochrogaster
ENSGACG00000020055snrpf10096.471ENSMOCG00000020437Snrpf9996.471Microtus_ochrogaster
ENSGACG00000020055snrpf10097.647ENSMMOG00000007127snrpf10097.647Mola_mola
ENSGACG00000020055snrpf10096.471ENSMODG00000008091SNRPF7596.471Monodelphis_domestica
ENSGACG00000020055snrpf9998.810ENSMALG00000012328snrpf9998.810Monopterus_albus
ENSGACG00000020055snrpf10096.471MGP_CAROLIEiJ_G0015735-9996.471Mus_caroli
ENSGACG00000020055snrpf10096.471ENSMUSG00000020018Snrpf9996.471Mus_musculus
ENSGACG00000020055snrpf10096.471MGP_PahariEiJ_G0031350Snrpf9996.471Mus_pahari
ENSGACG00000020055snrpf10096.471MGP_SPRETEiJ_G0016553Snrpf9996.471Mus_spretus
ENSGACG00000020055snrpf10096.471ENSMPUG00000007176-7696.471Mustela_putorius_furo
ENSGACG00000020055snrpf10096.471ENSMLUG00000027932-8096.471Myotis_lucifugus
ENSGACG00000020055snrpf10096.471ENSMLUG00000029201-8096.471Myotis_lucifugus
ENSGACG00000020055snrpf10096.471ENSMLUG00000026149-8096.471Myotis_lucifugus
ENSGACG00000020055snrpf10096.471ENSMLUG00000013577-10096.471Myotis_lucifugus
ENSGACG00000020055snrpf10077.647ENSMLUG00000026269-7075.676Myotis_lucifugus
ENSGACG00000020055snrpf7488.889ENSNGAG00000005851-7188.333Nannospalax_galili
ENSGACG00000020055snrpf10096.471ENSNGAG00000024292-9996.471Nannospalax_galili
ENSGACG00000020055snrpf10098.824ENSNBRG00000011682snrpf8798.824Neolamprologus_brichardi
ENSGACG00000020055snrpf8770.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSGACG00000020055snrpf10096.471ENSODEG00000010328-9996.471Octodon_degus
ENSGACG00000020055snrpf10096.471ENSOCUG00000010925SNRPF7596.471Oryctolagus_cuniculus
ENSGACG00000020055snrpf10098.824ENSORLG00020008216snrpf10098.824Oryzias_latipes_hni
ENSGACG00000020055snrpf10098.824ENSORLG00015007418snrpf10098.824Oryzias_latipes_hsok
ENSGACG00000020055snrpf99100.000ENSOMEG00000003018snrpf99100.000Oryzias_melastigma
ENSGACG00000020055snrpf8794.595ENSOGAG00000030323-8694.595Otolemur_garnettii
ENSGACG00000020055snrpf10096.471ENSOARG00000011853-7496.471Ovis_aries
ENSGACG00000020055snrpf9877.108ENSPPAG00000037544-8274.324Pan_paniscus
ENSGACG00000020055snrpf9273.077ENSPPAG00000037479-8971.622Pan_paniscus
ENSGACG00000020055snrpf10096.471ENSPPRG00000005875-9996.471Panthera_pardus
ENSGACG00000020055snrpf9874.699ENSPPRG00000007449-7674.324Panthera_pardus
ENSGACG00000020055snrpf10096.471ENSPTIG00000007520SNRPF9996.471Panthera_tigris_altaica
ENSGACG00000020055snrpf9877.108ENSPTIG00000005117-8874.324Panthera_tigris_altaica
ENSGACG00000020055snrpf9273.077ENSPTRG00000047717-8971.622Pan_troglodytes
ENSGACG00000020055snrpf9877.108ENSPTRG00000043814-8274.324Pan_troglodytes
ENSGACG00000020055snrpf10098.824ENSPKIG00000014784snrpf9398.824Paramormyrops_kingsleyae
ENSGACG00000020055snrpf10096.471ENSPSIG00000016462SNRPF9996.471Pelodiscus_sinensis
ENSGACG00000020055snrpf10097.647ENSPMGG00000023548snrpf10097.647Periophthalmus_magnuspinnatus
ENSGACG00000020055snrpf10096.471ENSPEMG00000023326Snrpf9996.471Peromyscus_maniculatus_bairdii
ENSGACG00000020055snrpf9998.810ENSPLAG00000023932snrpf9998.810Poecilia_latipinna
ENSGACG00000020055snrpf9998.810ENSPMEG00000003377snrpf9998.810Poecilia_mexicana
ENSGACG00000020055snrpf9998.810ENSPREG00000022635snrpf9798.810Poecilia_reticulata
ENSGACG00000020055snrpf10096.471ENSPPYG00000004847-9996.471Pongo_abelii
ENSGACG00000020055snrpf10096.471ENSPCOG00000023833-9996.471Propithecus_coquereli
ENSGACG00000020055snrpf10096.471ENSPVAG00000009036SNRPF9996.471Pteropus_vampyrus
ENSGACG00000020055snrpf9998.810ENSPNYG00000021712snrpf9998.810Pundamilia_nyererei
ENSGACG00000020055snrpf99100.000ENSPNAG00000019117snrpf99100.000Pygocentrus_nattereri
ENSGACG00000020055snrpf10096.471ENSRNOG00000005556Snrpf9996.471Rattus_norvegicus
ENSGACG00000020055snrpf8793.243ENSRBIG00000030414-8693.243Rhinopithecus_bieti
ENSGACG00000020055snrpf8793.243ENSRROG00000021975-8693.243Rhinopithecus_roxellana
ENSGACG00000020055snrpf8259.155YPR182WSMX38359.155Saccharomyces_cerevisiae
ENSGACG00000020055snrpf10096.471ENSSBOG00000036179-9996.471Saimiri_boliviensis_boliviensis
ENSGACG00000020055snrpf8781.081ENSSBOG00000032297-8581.081Saimiri_boliviensis_boliviensis
ENSGACG00000020055snrpf8795.946ENSSBOG00000012868-8695.946Saimiri_boliviensis_boliviensis
ENSGACG00000020055snrpf9176.250ENSSBOG00000027638-9076.250Saimiri_boliviensis_boliviensis
ENSGACG00000020055snrpf10096.471ENSSHAG00000012294SNRPF7796.471Sarcophilus_harrisii
ENSGACG00000020055snrpf7598.438ENSSFOG00015021523snrpf9698.438Scleropages_formosus
ENSGACG00000020055snrpf100100.000ENSSMAG00000005533snrpf98100.000Scophthalmus_maximus
ENSGACG00000020055snrpf7598.438ENSSDUG00000016283snrpf7698.438Seriola_dumerili
ENSGACG00000020055snrpf9470.000ENSSLDG00000003885-9072.973Seriola_lalandi_dorsalis
ENSGACG00000020055snrpf9998.810ENSSLDG00000005119snrpf9898.810Seriola_lalandi_dorsalis
ENSGACG00000020055snrpf9996.429ENSSPUG00000014590-9996.429Sphenodon_punctatus
ENSGACG00000020055snrpf10098.824ENSSPAG00000003283snrpf9798.824Stegastes_partitus
ENSGACG00000020055snrpf10096.471ENSSSCG00000000895SNRPF9996.471Sus_scrofa
ENSGACG00000020055snrpf8197.101ENSTRUG00000014956snrpf10097.101Takifugu_rubripes
ENSGACG00000020055snrpf10097.647ENSTNIG00000012672snrpf9997.647Tetraodon_nigroviridis
ENSGACG00000020055snrpf8770.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSGACG00000020055snrpf10083.529ENSUAMG00000001101-8785.135Ursus_americanus
ENSGACG00000020055snrpf10096.471ENSUAMG00000008176-9996.471Ursus_americanus
ENSGACG00000020055snrpf8785.135ENSUMAG00000006177-8785.135Ursus_maritimus
ENSGACG00000020055snrpf10096.471ENSUMAG00000003528-9996.471Ursus_maritimus
ENSGACG00000020055snrpf10096.471ENSVPAG00000008712-9996.471Vicugna_pacos
ENSGACG00000020055snrpf9188.312ENSVVUG00000023821-9587.838Vulpes_vulpes
ENSGACG00000020055snrpf8775.000ENSXETG00000021630snrpf8775.000Xenopus_tropicalis
ENSGACG00000020055snrpf9998.810ENSXCOG00000013860snrpf9798.810Xiphophorus_couchianus
ENSGACG00000020055snrpf9998.810ENSXMAG00000015448snrpf9998.810Xiphophorus_maculatus

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