EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020096 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3331 bases
Position: chrgroupVII:10543173-10546503
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026550	RNase_T	PF00929.24	6.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000026601	-	767	-	ENSGACP00000026550	202 (aa)	-	G3Q9I5

Gene Model

Click here to download ENSGACG00000020096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020096	smfn	87	80.114	ENSG00000076043	REXO2	95	76.536	Homo_sapiens
ENSGACG00000020096	smfn	53	88.073	ENSAPOG00000011971	smfn	94	88.073	Acanthochromis_polyacanthus
ENSGACG00000020096	smfn	87	80.114	ENSAMEG00000013263	REXO2	80	77.778	Ailuropoda_melanoleuca
ENSGACG00000020096	smfn	88	84.831	ENSACIG00000023553	smfn	96	84.831	Amphilophus_citrinellus
ENSGACG00000020096	smfn	74	75.000	ENSAOCG00000011565	smfn	95	75.000	Amphiprion_ocellaris
ENSGACG00000020096	smfn	96	87.692	ENSAPEG00000012435	smfn	72	87.692	Amphiprion_percula
ENSGACG00000020096	smfn	92	87.166	ENSATEG00000015385	smfn	67	87.166	Anabas_testudineus
ENSGACG00000020096	smfn	91	74.054	ENSAPLG00000005045	REXO2	90	74.054	Anas_platyrhynchos
ENSGACG00000020096	smfn	90	71.429	ENSACAG00000011631	REXO2	85	71.823	Anolis_carolinensis
ENSGACG00000020096	smfn	87	80.682	ENSANAG00000020834	REXO2	80	78.307	Aotus_nancymaae
ENSGACG00000020096	smfn	57	62.931	ENSANAG00000027457	-	92	59.259	Aotus_nancymaae
ENSGACG00000020096	smfn	92	85.484	ENSACLG00000024566	smfn	90	87.059	Astatotilapia_calliptera
ENSGACG00000020096	smfn	87	80.114	ENSBTAG00000005843	REXO2	80	77.778	Bos_taurus
ENSGACG00000020096	smfn	88	46.067	WBGene00007429	C08B6.8	92	52.778	Caenorhabditis_elegans
ENSGACG00000020096	smfn	87	79.545	ENSCJAG00000012434	REXO2	80	77.249	Callithrix_jacchus
ENSGACG00000020096	smfn	87	78.977	ENSCAFG00000013511	REXO2	80	76.720	Canis_familiaris
ENSGACG00000020096	smfn	87	80.114	ENSCAFG00020002513	REXO2	80	77.778	Canis_lupus_dingo
ENSGACG00000020096	smfn	87	80.114	ENSCHIG00000009264	REXO2	80	77.778	Capra_hircus
ENSGACG00000020096	smfn	87	80.682	ENSTSYG00000002237	REXO2	80	78.307	Carlito_syrichta
ENSGACG00000020096	smfn	86	68.208	ENSTSYG00000027948	-	95	66.667	Carlito_syrichta
ENSGACG00000020096	smfn	82	80.120	ENSCAPG00000006093	REXO2	95	77.654	Cavia_aperea
ENSGACG00000020096	smfn	87	80.682	ENSCPOG00000010548	REXO2	80	78.307	Cavia_porcellus
ENSGACG00000020096	smfn	87	80.682	ENSCCAG00000034979	REXO2	80	78.307	Cebus_capucinus
ENSGACG00000020096	smfn	87	80.114	ENSCATG00000015278	REXO2	80	77.249	Cercocebus_atys
ENSGACG00000020096	smfn	87	80.682	ENSCLAG00000011195	REXO2	80	78.307	Chinchilla_lanigera
ENSGACG00000020096	smfn	87	80.114	ENSCSAG00000002754	REXO2	80	77.249	Chlorocebus_sabaeus
ENSGACG00000020096	smfn	50	83.168	ENSCHOG00000013497	REXO2	72	83.168	Choloepus_hoffmanni
ENSGACG00000020096	smfn	87	78.409	ENSCHOG00000000642	-	80	76.190	Choloepus_hoffmanni
ENSGACG00000020096	smfn	67	72.059	ENSCPBG00000009359	REXO2	94	72.059	Chrysemys_picta_bellii
ENSGACG00000020096	smfn	87	59.429	ENSCING00000009858	-	84	59.429	Ciona_intestinalis
ENSGACG00000020096	smfn	87	80.114	ENSCANG00000034756	REXO2	80	77.249	Colobus_angolensis_palliatus
ENSGACG00000020096	smfn	87	77.273	ENSCGRG00001010922	-	92	74.603	Cricetulus_griseus_chok1gshd
ENSGACG00000020096	smfn	87	80.114	ENSCGRG00001019814	-	80	77.778	Cricetulus_griseus_chok1gshd
ENSGACG00000020096	smfn	87	78.409	ENSCGRG00001013673	-	92	76.720	Cricetulus_griseus_chok1gshd
ENSGACG00000020096	smfn	87	80.114	ENSCGRG00000006235	Rexo2	80	77.778	Cricetulus_griseus_crigri
ENSGACG00000020096	smfn	92	85.027	ENSCSEG00000007214	smfn	70	83.077	Cynoglossus_semilaevis
ENSGACG00000020096	smfn	91	81.081	ENSCVAG00000012008	smfn	100	81.081	Cyprinodon_variegatus
ENSGACG00000020096	smfn	99	80.500	ENSDARG00000009806	smfn	76	80.500	Danio_rerio
ENSGACG00000020096	smfn	84	81.765	ENSDNOG00000046533	REXO2	81	81.765	Dasypus_novemcinctus
ENSGACG00000020096	smfn	87	80.682	ENSDORG00000011255	Rexo2	80	78.307	Dipodomys_ordii
ENSGACG00000020096	smfn	86	61.850	ENSDORG00000025142	-	80	60.753	Dipodomys_ordii
ENSGACG00000020096	smfn	86	53.448	FBgn0039115	CG10214	82	53.448	Drosophila_melanogaster
ENSGACG00000020096	smfn	90	74.033	ENSEBUG00000013964	REXO2	62	74.033	Eptatretus_burgeri
ENSGACG00000020096	smfn	87	80.114	ENSEASG00005006674	REXO2	80	77.778	Equus_asinus_asinus
ENSGACG00000020096	smfn	87	80.114	ENSECAG00000005988	REXO2	80	77.778	Equus_caballus
ENSGACG00000020096	smfn	93	80.851	ENSELUG00000020072	smfn	65	80.851	Esox_lucius
ENSGACG00000020096	smfn	87	80.114	ENSFCAG00000018632	REXO2	80	77.778	Felis_catus
ENSGACG00000020096	smfn	89	74.444	ENSFALG00000010044	REXO2	89	74.444	Ficedula_albicollis
ENSGACG00000020096	smfn	87	80.682	ENSFDAG00000011764	REXO2	80	78.307	Fukomys_damarensis
ENSGACG00000020096	smfn	93	81.915	ENSGMOG00000006370	smfn	97	81.915	Gadus_morhua
ENSGACG00000020096	smfn	93	76.064	ENSGALG00000035980	REXO2	81	75.661	Gallus_gallus
ENSGACG00000020096	smfn	96	84.615	ENSGAFG00000015349	smfn	70	84.615	Gambusia_affinis
ENSGACG00000020096	smfn	92	78.075	ENSGAGG00000021126	REXO2	81	78.075	Gopherus_agassizii
ENSGACG00000020096	smfn	87	80.114	ENSGGOG00000023267	REXO2	80	77.249	Gorilla_gorilla
ENSGACG00000020096	smfn	57	88.793	ENSHBUG00000020097	REXO2	57	88.793	Haplochromis_burtoni
ENSGACG00000020096	smfn	87	80.114	ENSHGLG00000013556	REXO2	80	77.778	Heterocephalus_glaber_female
ENSGACG00000020096	smfn	87	80.682	ENSHGLG00100005257	REXO2	80	78.307	Heterocephalus_glaber_male
ENSGACG00000020096	smfn	83	82.738	ENSHCOG00000007122	smfn	94	82.738	Hippocampus_comes
ENSGACG00000020096	smfn	94	82.723	ENSIPUG00000020440	rexo2	70	82.723	Ictalurus_punctatus
ENSGACG00000020096	smfn	87	80.682	ENSSTOG00000012465	REXO2	80	78.307	Ictidomys_tridecemlineatus
ENSGACG00000020096	smfn	93	57.143	ENSJJAG00000022605	-	74	57.143	Jaculus_jaculus
ENSGACG00000020096	smfn	87	80.682	ENSJJAG00000013710	-	80	78.307	Jaculus_jaculus
ENSGACG00000020096	smfn	93	83.422	ENSKMAG00000016795	smfn	67	83.511	Kryptolebias_marmoratus
ENSGACG00000020096	smfn	88	81.564	ENSLBEG00000006021	smfn	95	81.564	Labrus_bergylta
ENSGACG00000020096	smfn	92	68.617	ENSLACG00000018623	REXO2	77	68.617	Latimeria_chalumnae
ENSGACG00000020096	smfn	95	80.513	ENSLOCG00000002389	smfn	93	80.513	Lepisosteus_oculatus
ENSGACG00000020096	smfn	87	80.114	ENSLAFG00000012451	REXO2	80	77.778	Loxodonta_africana
ENSGACG00000020096	smfn	87	80.114	ENSMFAG00000041155	REXO2	80	77.249	Macaca_fascicularis
ENSGACG00000020096	smfn	87	80.114	ENSMMUG00000012269	REXO2	80	77.249	Macaca_mulatta
ENSGACG00000020096	smfn	87	80.114	ENSMNEG00000033379	REXO2	80	77.249	Macaca_nemestrina
ENSGACG00000020096	smfn	87	80.114	ENSMLEG00000036571	REXO2	80	77.249	Mandrillus_leucophaeus
ENSGACG00000020096	smfn	96	87.113	ENSMAMG00000021209	smfn	70	87.113	Mastacembelus_armatus
ENSGACG00000020096	smfn	92	85.484	ENSMZEG00005020730	REXO2	72	85.484	Maylandia_zebra
ENSGACG00000020096	smfn	92	85.484	ENSMZEG00005023224	-	72	85.484	Maylandia_zebra
ENSGACG00000020096	smfn	75	72.727	ENSMGAG00000003026	REXO2	94	72.727	Meleagris_gallopavo
ENSGACG00000020096	smfn	87	80.114	ENSMAUG00000014576	Rexo2	80	77.778	Mesocricetus_auratus
ENSGACG00000020096	smfn	87	80.682	ENSMICG00000010094	REXO2	80	78.307	Microcebus_murinus
ENSGACG00000020096	smfn	93	77.778	ENSMOCG00000009016	Rexo2	80	77.778	Microtus_ochrogaster
ENSGACG00000020096	smfn	98	78.680	ENSMMOG00000006430	smfn	72	78.680	Mola_mola
ENSGACG00000020096	smfn	93	78.836	ENSMODG00000013913	REXO2	80	78.836	Monodelphis_domestica
ENSGACG00000020096	smfn	94	85.714	ENSMALG00000018130	smfn	54	85.714	Monopterus_albus
ENSGACG00000020096	smfn	87	78.977	MGP_CAROLIEiJ_G0032166	Rexo2	80	76.720	Mus_caroli
ENSGACG00000020096	smfn	87	78.977	ENSMUSG00000032026	Rexo2	80	76.720	Mus_musculus
ENSGACG00000020096	smfn	87	78.977	MGP_PahariEiJ_G0015034	Rexo2	80	76.720	Mus_pahari
ENSGACG00000020096	smfn	87	78.977	MGP_SPRETEiJ_G0033305	Rexo2	80	76.720	Mus_spretus
ENSGACG00000020096	smfn	87	80.114	ENSMPUG00000003947	REXO2	80	77.778	Mustela_putorius_furo
ENSGACG00000020096	smfn	87	79.545	ENSMLUG00000009030	REXO2	80	77.249	Myotis_lucifugus
ENSGACG00000020096	smfn	87	80.114	ENSNGAG00000008819	Rexo2	92	77.778	Nannospalax_galili
ENSGACG00000020096	smfn	84	85.882	ENSNBRG00000006529	smfn	90	85.882	Neolamprologus_brichardi
ENSGACG00000020096	smfn	87	80.114	ENSNLEG00000029745	REXO2	80	77.249	Nomascus_leucogenys
ENSGACG00000020096	smfn	93	78.307	ENSMEUG00000011558	REXO2	87	78.307	Notamacropus_eugenii
ENSGACG00000020096	smfn	55	75.893	ENSOPRG00000011076	REXO2	53	72.800	Ochotona_princeps
ENSGACG00000020096	smfn	82	80.120	ENSODEG00000009750	-	95	77.654	Octodon_degus
ENSGACG00000020096	smfn	85	64.912	ENSODEG00000016046	-	85	64.912	Octodon_degus
ENSGACG00000020096	smfn	96	84.536	ENSONIG00000001954	smfn	84	84.536	Oreochromis_niloticus
ENSGACG00000020096	smfn	87	78.977	ENSOANG00000001754	REXO2	79	76.720	Ornithorhynchus_anatinus
ENSGACG00000020096	smfn	87	80.682	ENSOCUG00000004274	REXO2	76	78.307	Oryctolagus_cuniculus
ENSGACG00000020096	smfn	96	80.513	ENSORLG00000005119	smfn	63	80.513	Oryzias_latipes
ENSGACG00000020096	smfn	96	81.538	ENSORLG00020010121	smfn	63	81.538	Oryzias_latipes_hni
ENSGACG00000020096	smfn	96	81.538	ENSORLG00015015699	smfn	63	81.538	Oryzias_latipes_hsok
ENSGACG00000020096	smfn	64	78.462	ENSOMEG00000008940	-	91	78.462	Oryzias_melastigma
ENSGACG00000020096	smfn	94	79.894	ENSOMEG00000016878	REXO2	69	79.894	Oryzias_melastigma
ENSGACG00000020096	smfn	87	80.682	ENSOGAG00000016860	REXO2	80	78.307	Otolemur_garnettii
ENSGACG00000020096	smfn	87	80.114	ENSOARG00000001040	REXO2	89	77.778	Ovis_aries
ENSGACG00000020096	smfn	87	80.114	ENSPPAG00000039849	REXO2	80	77.249	Pan_paniscus
ENSGACG00000020096	smfn	87	80.114	ENSPPRG00000007255	REXO2	80	77.778	Panthera_pardus
ENSGACG00000020096	smfn	82	79.518	ENSPTIG00000015578	REXO2	95	77.095	Panthera_tigris_altaica
ENSGACG00000020096	smfn	87	80.114	ENSPTRG00000004306	REXO2	80	77.249	Pan_troglodytes
ENSGACG00000020096	smfn	87	80.114	ENSPANG00000010675	REXO2	80	77.249	Papio_anubis
ENSGACG00000020096	smfn	96	79.487	ENSPKIG00000000911	smfn	77	82.432	Paramormyrops_kingsleyae
ENSGACG00000020096	smfn	93	78.307	ENSPSIG00000005151	REXO2	71	76.410	Pelodiscus_sinensis
ENSGACG00000020096	smfn	88	81.564	ENSPMGG00000007442	smfn	95	81.564	Periophthalmus_magnuspinnatus
ENSGACG00000020096	smfn	87	64.205	ENSPEMG00000001421	Rexo2	78	62.963	Peromyscus_maniculatus_bairdii
ENSGACG00000020096	smfn	57	73.276	ENSPMAG00000001022	REXO2	100	73.276	Petromyzon_marinus
ENSGACG00000020096	smfn	93	78.836	ENSPCIG00000011227	REXO2	50	78.836	Phascolarctos_cinereus
ENSGACG00000020096	smfn	96	86.154	ENSPFOG00000017861	smfn	96	86.154	Poecilia_formosa
ENSGACG00000020096	smfn	89	81.006	ENSPLAG00000007327	REXO2	68	81.006	Poecilia_latipinna
ENSGACG00000020096	smfn	96	85.641	ENSPMEG00000017343	smfn	70	85.641	Poecilia_mexicana
ENSGACG00000020096	smfn	96	84.615	ENSPREG00000016438	smfn	70	84.615	Poecilia_reticulata
ENSGACG00000020096	smfn	87	80.114	ENSPPYG00000003895	REXO2	80	77.249	Pongo_abelii
ENSGACG00000020096	smfn	87	79.545	ENSPCAG00000005237	REXO2	80	77.249	Procavia_capensis
ENSGACG00000020096	smfn	77	81.410	ENSPCOG00000027639	REXO2	80	81.410	Propithecus_coquereli
ENSGACG00000020096	smfn	87	66.292	ENSPVAG00000005295	REXO2	80	64.921	Pteropus_vampyrus
ENSGACG00000020096	smfn	92	84.946	ENSPNYG00000018401	smfn	72	84.946	Pundamilia_nyererei
ENSGACG00000020096	smfn	93	82.540	ENSPNAG00000005290	smfn	70	82.540	Pygocentrus_nattereri
ENSGACG00000020096	smfn	87	78.977	ENSRNOG00000018939	Rexo2	80	76.720	Rattus_norvegicus
ENSGACG00000020096	smfn	87	80.114	ENSRBIG00000037809	REXO2	80	77.249	Rhinopithecus_bieti
ENSGACG00000020096	smfn	87	80.114	ENSRROG00000038928	REXO2	80	77.249	Rhinopithecus_roxellana
ENSGACG00000020096	smfn	88	43.011	YLR059C	REX2	69	43.011	Saccharomyces_cerevisiae
ENSGACG00000020096	smfn	87	80.682	ENSSBOG00000028651	REXO2	80	78.307	Saimiri_boliviensis_boliviensis
ENSGACG00000020096	smfn	93	78.836	ENSSHAG00000008008	REXO2	81	78.836	Sarcophilus_harrisii
ENSGACG00000020096	smfn	88	79.330	ENSSFOG00015022414	smfn	95	79.330	Scleropages_formosus
ENSGACG00000020096	smfn	98	83.333	ENSSMAG00000003168	smfn	72	83.333	Scophthalmus_maximus
ENSGACG00000020096	smfn	96	86.154	ENSSDUG00000015624	smfn	68	86.154	Seriola_dumerili
ENSGACG00000020096	smfn	96	86.667	ENSSLDG00000014005	smfn	69	86.667	Seriola_lalandi_dorsalis
ENSGACG00000020096	smfn	63	83.465	ENSSARG00000014530	REXO2	100	83.465	Sorex_araneus
ENSGACG00000020096	smfn	74	69.536	ENSSPUG00000006005	REXO2	81	69.536	Sphenodon_punctatus
ENSGACG00000020096	smfn	88	89.385	ENSSPAG00000001530	smfn	96	89.385	Stegastes_partitus
ENSGACG00000020096	smfn	87	80.114	ENSSSCG00000015056	REXO2	80	77.778	Sus_scrofa
ENSGACG00000020096	smfn	93	74.603	ENSTGUG00000000121	REXO2	81	74.603	Taeniopygia_guttata
ENSGACG00000020096	smfn	93	82.353	ENSTRUG00000021529	smfn	71	80.829	Takifugu_rubripes
ENSGACG00000020096	smfn	87	85.795	ENSTNIG00000008588	smfn	81	84.066	Tetraodon_nigroviridis
ENSGACG00000020096	smfn	87	80.682	ENSTBEG00000017040	REXO2	80	78.307	Tupaia_belangeri
ENSGACG00000020096	smfn	90	78.142	ENSTTRG00000014928	REXO2	83	76.020	Tursiops_truncatus
ENSGACG00000020096	smfn	87	73.596	ENSUAMG00000019096	REXO2	80	80.769	Ursus_americanus
ENSGACG00000020096	smfn	87	80.114	ENSUMAG00000003770	REXO2	80	77.778	Ursus_maritimus
ENSGACG00000020096	smfn	82	59.639	ENSVPAG00000006301	REXO2	97	57.692	Vicugna_pacos
ENSGACG00000020096	smfn	87	80.114	ENSVVUG00000025223	REXO2	80	77.778	Vulpes_vulpes
ENSGACG00000020096	smfn	93	78.307	ENSXETG00000012648	rexo2	78	77.895	Xenopus_tropicalis
ENSGACG00000020096	smfn	90	84.699	ENSXCOG00000018838	smfn	91	86.517	Xiphophorus_couchianus
ENSGACG00000020096	smfn	96	84.021	ENSXMAG00000021125	smfn	62	84.021	Xiphophorus_maculatus