EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020137 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2019 bases
Position: chrscaffold_84:150137-152155
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026602	RRM_1	PF00076.22	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000026653	-	258	-	ENSGACP00000026602	86 (aa)	-	G3Q9N7

Gene Model

Click here to download ENSGACG00000020137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020137's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020137	slirp	81	58.571	ENSG00000119705	SLIRP	89	57.353	Homo_sapiens
ENSGACG00000020137	slirp	95	81.707	ENSAPOG00000001298	slirp	82	81.707	Acanthochromis_polyacanthus
ENSGACG00000020137	slirp	81	58.571	ENSAMEG00000003975	SLIRP	77	58.571	Ailuropoda_melanoleuca
ENSGACG00000020137	slirp	91	82.051	ENSACIG00000023083	slirp	77	82.051	Amphilophus_citrinellus
ENSGACG00000020137	slirp	91	84.615	ENSAOCG00000006342	slirp	79	84.615	Amphiprion_ocellaris
ENSGACG00000020137	slirp	91	84.615	ENSAPEG00000015917	slirp	79	84.615	Amphiprion_percula
ENSGACG00000020137	slirp	91	84.615	ENSAPEG00000015719	-	80	84.615	Amphiprion_percula
ENSGACG00000020137	slirp	95	73.171	ENSATEG00000013525	slirp	82	73.171	Anabas_testudineus
ENSGACG00000020137	slirp	95	60.976	ENSAMXG00000018693	slirp	82	60.976	Astyanax_mexicanus
ENSGACG00000020137	slirp	97	51.807	ENSCJAG00000016946	SLIRP	81	52.500	Callithrix_jacchus
ENSGACG00000020137	slirp	84	56.944	ENSCAFG00020015876	-	65	56.944	Canis_lupus_dingo
ENSGACG00000020137	slirp	97	53.012	ENSCCAG00000030130	SLIRP	72	53.012	Cebus_capucinus
ENSGACG00000020137	slirp	97	53.012	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSGACG00000020137	slirp	98	52.381	ENSCSAG00000011736	SLIRP	72	52.381	Chlorocebus_sabaeus
ENSGACG00000020137	slirp	90	62.338	ENSCPBG00000026327	SLIRP	78	62.338	Chrysemys_picta_bellii
ENSGACG00000020137	slirp	79	60.294	ENSCANG00000032892	SLIRP	69	60.294	Colobus_angolensis_palliatus
ENSGACG00000020137	slirp	99	50.000	ENSCGRG00001024068	Slirp	77	50.000	Cricetulus_griseus_chok1gshd
ENSGACG00000020137	slirp	99	50.000	ENSCGRG00000017440	Slirp	77	50.000	Cricetulus_griseus_crigri
ENSGACG00000020137	slirp	95	57.317	ENSCSEG00000015766	slirp	84	57.317	Cynoglossus_semilaevis
ENSGACG00000020137	slirp	92	87.342	ENSCVAG00000012504	slirp	78	87.342	Cyprinodon_variegatus
ENSGACG00000020137	slirp	91	76.923	ENSDARG00000097753	slirp	79	75.309	Danio_rerio
ENSGACG00000020137	slirp	92	45.570	ENSDNOG00000007721	SLIRP	77	45.882	Dasypus_novemcinctus
ENSGACG00000020137	slirp	84	48.611	ENSDORG00000012379	Slirp	65	48.611	Dipodomys_ordii
ENSGACG00000020137	slirp	84	45.833	ENSETEG00000010345	SLIRP	67	45.833	Echinops_telfairi
ENSGACG00000020137	slirp	84	56.944	ENSEASG00005020193	SLIRP	65	56.944	Equus_asinus_asinus
ENSGACG00000020137	slirp	80	55.072	ENSEEUG00000007257	SLIRP	68	55.072	Erinaceus_europaeus
ENSGACG00000020137	slirp	95	71.951	ENSELUG00000016800	slirp	81	71.951	Esox_lucius
ENSGACG00000020137	slirp	79	57.353	ENSFCAG00000036326	SLIRP	69	57.353	Felis_catus
ENSGACG00000020137	slirp	91	56.410	ENSFALG00000012583	SLIRP	74	56.410	Ficedula_albicollis
ENSGACG00000020137	slirp	83	54.930	ENSFDAG00000008347	SLIRP	63	54.930	Fukomys_damarensis
ENSGACG00000020137	slirp	70	76.667	ENSFHEG00000004709	slirp	65	76.667	Fundulus_heteroclitus
ENSGACG00000020137	slirp	94	80.247	ENSGMOG00000016948	slirp	77	80.247	Gadus_morhua
ENSGACG00000020137	slirp	90	55.844	ENSGALG00000031238	SLIRP	85	53.086	Gallus_gallus
ENSGACG00000020137	slirp	95	80.488	ENSGAFG00000010998	slirp	82	80.488	Gambusia_affinis
ENSGACG00000020137	slirp	90	63.636	ENSGAGG00000009953	SLIRP	53	63.636	Gopherus_agassizii
ENSGACG00000020137	slirp	84	55.556	ENSGGOG00000011059	-	73	57.353	Gorilla_gorilla
ENSGACG00000020137	slirp	83	52.113	ENSHGLG00000018491	SLIRP	64	52.113	Heterocephalus_glaber_female
ENSGACG00000020137	slirp	83	52.113	ENSHGLG00100014153	SLIRP	64	52.113	Heterocephalus_glaber_male
ENSGACG00000020137	slirp	95	80.488	ENSHCOG00000006795	slirp	83	80.488	Hippocampus_comes
ENSGACG00000020137	slirp	95	71.951	ENSIPUG00000010214	SLIRP	82	71.951	Ictalurus_punctatus
ENSGACG00000020137	slirp	84	54.167	ENSSTOG00000034316	SLIRP	65	54.167	Ictidomys_tridecemlineatus
ENSGACG00000020137	slirp	95	63.415	ENSKMAG00000002038	slirp	79	63.415	Kryptolebias_marmoratus
ENSGACG00000020137	slirp	95	68.293	ENSLBEG00000007564	slirp	82	68.293	Labrus_bergylta
ENSGACG00000020137	slirp	95	75.610	ENSLACG00000013434	SLIRP	79	75.610	Latimeria_chalumnae
ENSGACG00000020137	slirp	98	52.381	ENSMFAG00000042960	SLIRP	73	58.824	Macaca_fascicularis
ENSGACG00000020137	slirp	98	52.381	ENSMMUG00000029256	SLIRP	73	58.824	Macaca_mulatta
ENSGACG00000020137	slirp	98	52.381	ENSMNEG00000028921	SLIRP	73	58.824	Macaca_nemestrina
ENSGACG00000020137	slirp	79	58.824	ENSMLEG00000043644	SLIRP	68	59.701	Mandrillus_leucophaeus
ENSGACG00000020137	slirp	91	82.051	ENSMZEG00005004617	slirp	79	82.051	Maylandia_zebra
ENSGACG00000020137	slirp	99	50.000	ENSMAUG00000003857	Slirp	77	50.000	Mesocricetus_auratus
ENSGACG00000020137	slirp	83	61.972	ENSMICG00000012080	SLIRP	66	61.972	Microcebus_murinus
ENSGACG00000020137	slirp	99	51.163	ENSMOCG00000016019	Slirp	85	51.163	Microtus_ochrogaster
ENSGACG00000020137	slirp	95	82.927	ENSMMOG00000018268	slirp	82	82.927	Mola_mola
ENSGACG00000020137	slirp	80	55.072	ENSMODG00000005207	-	97	55.072	Monodelphis_domestica
ENSGACG00000020137	slirp	95	76.829	ENSMALG00000012581	slirp	84	76.829	Monopterus_albus
ENSGACG00000020137	slirp	84	54.167	MGP_CAROLIEiJ_G0017995	Slirp	67	54.167	Mus_caroli
ENSGACG00000020137	slirp	84	55.556	ENSMUSG00000021040	Slirp	73	55.556	Mus_musculus
ENSGACG00000020137	slirp	84	54.167	MGP_SPRETEiJ_G0018840	Slirp	64	54.167	Mus_spretus
ENSGACG00000020137	slirp	84	52.778	ENSMLUG00000029544	-	65	52.778	Myotis_lucifugus
ENSGACG00000020137	slirp	81	54.286	ENSMLUG00000024998	-	63	54.286	Myotis_lucifugus
ENSGACG00000020137	slirp	83	47.887	ENSNGAG00000016363	Slirp	68	47.887	Nannospalax_galili
ENSGACG00000020137	slirp	98	46.429	ENSNLEG00000027238	-	88	47.561	Nomascus_leucogenys
ENSGACG00000020137	slirp	98	46.429	ENSNLEG00000032459	-	73	52.941	Nomascus_leucogenys
ENSGACG00000020137	slirp	83	54.930	ENSODEG00000012580	SLIRP	77	54.930	Octodon_degus
ENSGACG00000020137	slirp	91	82.051	ENSONIG00000011692	slirp	79	82.051	Oreochromis_niloticus
ENSGACG00000020137	slirp	84	56.944	ENSOANG00000022366	SLIRP	65	56.944	Ornithorhynchus_anatinus
ENSGACG00000020137	slirp	95	80.488	ENSORLG00000010761	slirp	64	80.488	Oryzias_latipes
ENSGACG00000020137	slirp	95	79.268	ENSORLG00020022188	slirp	82	79.268	Oryzias_latipes_hni
ENSGACG00000020137	slirp	94	80.247	ENSORLG00015020171	slirp	80	80.247	Oryzias_latipes_hsok
ENSGACG00000020137	slirp	95	81.707	ENSOMEG00000019321	slirp	82	81.707	Oryzias_melastigma
ENSGACG00000020137	slirp	84	55.556	ENSPPAG00000040710	-	73	57.353	Pan_paniscus
ENSGACG00000020137	slirp	79	57.353	ENSPPRG00000014350	SLIRP	69	57.353	Panthera_pardus
ENSGACG00000020137	slirp	79	57.353	ENSPTIG00000014196	SLIRP	69	57.353	Panthera_tigris_altaica
ENSGACG00000020137	slirp	84	55.556	ENSPTRG00000030691	SLIRP	73	57.353	Pan_troglodytes
ENSGACG00000020137	slirp	98	52.381	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSGACG00000020137	slirp	71	72.131	ENSPKIG00000008831	slirp	60	72.131	Paramormyrops_kingsleyae
ENSGACG00000020137	slirp	92	79.747	ENSPMGG00000010541	slirp	91	79.747	Periophthalmus_magnuspinnatus
ENSGACG00000020137	slirp	84	52.778	ENSPEMG00000013234	Slirp	84	48.837	Peromyscus_maniculatus_bairdii
ENSGACG00000020137	slirp	87	50.667	ENSPMAG00000009355	slirp	83	50.667	Petromyzon_marinus
ENSGACG00000020137	slirp	80	53.623	ENSPCIG00000026842	-	74	53.623	Phascolarctos_cinereus
ENSGACG00000020137	slirp	92	81.013	ENSPFOG00000006758	slirp	79	81.013	Poecilia_formosa
ENSGACG00000020137	slirp	92	81.013	ENSPLAG00000011140	slirp	79	81.013	Poecilia_latipinna
ENSGACG00000020137	slirp	92	81.013	ENSPMEG00000019535	slirp	79	81.013	Poecilia_mexicana
ENSGACG00000020137	slirp	92	81.013	ENSPREG00000011673	slirp	79	81.013	Poecilia_reticulata
ENSGACG00000020137	slirp	83	54.930	ENSPPYG00000006030	SLIRP	65	54.930	Pongo_abelii
ENSGACG00000020137	slirp	83	59.155	ENSPCOG00000015159	SLIRP	66	59.155	Propithecus_coquereli
ENSGACG00000020137	slirp	95	78.049	ENSPNAG00000008633	slirp	83	78.049	Pygocentrus_nattereri
ENSGACG00000020137	slirp	78	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSGACG00000020137	slirp	76	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSGACG00000020137	slirp	83	57.746	ENSRBIG00000032222	-	73	58.824	Rhinopithecus_bieti
ENSGACG00000020137	slirp	83	52.113	ENSRBIG00000035817	-	65	52.113	Rhinopithecus_bieti
ENSGACG00000020137	slirp	83	57.746	ENSRROG00000041312	-	70	57.746	Rhinopithecus_roxellana
ENSGACG00000020137	slirp	78	59.701	ENSRROG00000017133	-	71	58.824	Rhinopithecus_roxellana
ENSGACG00000020137	slirp	83	57.746	ENSRROG00000036656	-	73	58.824	Rhinopithecus_roxellana
ENSGACG00000020137	slirp	76	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSGACG00000020137	slirp	83	57.746	ENSSBOG00000020014	SLIRP	73	58.824	Saimiri_boliviensis_boliviensis
ENSGACG00000020137	slirp	92	68.354	ENSSFOG00015011165	slirp	82	65.432	Scleropages_formosus
ENSGACG00000020137	slirp	95	57.317	ENSSMAG00000012930	slirp	80	57.317	Scophthalmus_maximus
ENSGACG00000020137	slirp	97	89.157	ENSSDUG00000021883	slirp	55	89.157	Seriola_dumerili
ENSGACG00000020137	slirp	97	89.157	ENSSLDG00000023136	slirp	75	89.157	Seriola_lalandi_dorsalis
ENSGACG00000020137	slirp	90	59.740	ENSSPUG00000009346	SLIRP	79	59.740	Sphenodon_punctatus
ENSGACG00000020137	slirp	94	74.074	ENSSPAG00000013477	slirp	81	74.074	Stegastes_partitus
ENSGACG00000020137	slirp	84	52.778	ENSSSCG00000028167	SLIRP	65	52.778	Sus_scrofa
ENSGACG00000020137	slirp	91	52.564	ENSTGUG00000012337	SLIRP	74	52.564	Taeniopygia_guttata
ENSGACG00000020137	slirp	95	74.699	ENSTRUG00000020127	slirp	82	72.289	Takifugu_rubripes
ENSGACG00000020137	slirp	84	54.167	ENSUAMG00000022445	SLIRP	65	54.167	Ursus_americanus
ENSGACG00000020137	slirp	84	54.167	ENSUMAG00000007166	SLIRP	65	54.167	Ursus_maritimus
ENSGACG00000020137	slirp	84	51.389	ENSVPAG00000001781	SLIRP	67	51.389	Vicugna_pacos
ENSGACG00000020137	slirp	84	55.556	ENSVVUG00000004436	SLIRP	65	55.556	Vulpes_vulpes
ENSGACG00000020137	slirp	95	71.951	ENSXETG00000030343	SLIRP	92	71.951	Xenopus_tropicalis
ENSGACG00000020137	slirp	95	79.268	ENSXCOG00000009422	slirp	82	79.268	Xiphophorus_couchianus
ENSGACG00000020137	slirp	95	80.488	ENSXMAG00000015655	slirp	82	80.488	Xiphophorus_maculatus