EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSGACG00000020302 (Gene tree)
Gene ID: -
Gene Symbol: MSI2 (1 of many)
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10471 bases
Position: chrgroupVII:16069120-16079590
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026825	RRM_1	PF00076.22	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000026877	MSI2 (1 of many)-201	312	-	ENSGACP00000026825	104 (aa)	-	G3QAA9

Gene Model

Click here to download ENSGACG00000020302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020302	MSI2	98	49.074	ENSGACG00000018116	hnrnpaba	57	49.074
ENSGACG00000020302	MSI2	84	57.471	ENSGACG00000020830	-	56	51.485
ENSGACG00000020302	MSI2	80	45.783	ENSGACG00000004477	hnrnpa3	52	47.436
ENSGACG00000020302	MSI2	76	35.897	ENSGACG00000016447	hnrnpa0b	54	35.897
ENSGACG00000020302	MSI2	100	76.923	ENSGACG00000012679	MSI1	56	76.923
ENSGACG00000020302	MSI2	84	63.218	ENSGACG00000008674	-	50	59.615
ENSGACG00000020302	MSI2	95	50.526	ENSGACG00000015669	hnrnpd	53	50.526