EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000020387 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6872 bases
Position: chrgroupVII:17833672-17840543
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000026949	ARS2	PF04959.13	2.9e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027001	-	2746	-	ENSGACP00000026949	886 (aa)	-	G3QAN3

Gene Model

Click here to download ENSGACG00000020387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020387	srrt	92	52.907	ENSGACG00000001100	-	53	63.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020387	srrt	51	75.488	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSGACG00000020387	srrt	95	82.298	ENSAPOG00000002304	srrt	96	89.176	Acanthochromis_polyacanthus
ENSGACG00000020387	srrt	51	75.764	ENSAMEG00000014506	SRRT	95	63.940	Ailuropoda_melanoleuca
ENSGACG00000020387	srrt	86	90.441	ENSACIG00000015795	srrt	94	90.511	Amphilophus_citrinellus
ENSGACG00000020387	srrt	51	63.482	ENSAOCG00000009189	-	95	57.326	Amphiprion_ocellaris
ENSGACG00000020387	srrt	83	91.304	ENSAOCG00000009693	srrt	96	89.387	Amphiprion_ocellaris
ENSGACG00000020387	srrt	51	63.482	ENSAPEG00000020016	-	95	57.326	Amphiprion_percula
ENSGACG00000020387	srrt	83	90.870	ENSAPEG00000003646	srrt	96	88.915	Amphiprion_percula
ENSGACG00000020387	srrt	52	62.863	ENSATEG00000003652	-	91	62.948	Anabas_testudineus
ENSGACG00000020387	srrt	95	85.190	ENSATEG00000014425	srrt	96	86.895	Anabas_testudineus
ENSGACG00000020387	srrt	52	76.190	ENSACAG00000001014	SRRT	95	66.082	Anolis_carolinensis
ENSGACG00000020387	srrt	51	74.359	ENSANAG00000031718	SRRT	95	63.230	Aotus_nancymaae
ENSGACG00000020387	srrt	95	86.848	ENSACLG00000013156	srrt	92	86.170	Astatotilapia_calliptera
ENSGACG00000020387	srrt	51	73.774	ENSBTAG00000001134	SRRT	95	62.372	Bos_taurus
ENSGACG00000020387	srrt	63	42.466	WBGene00017085	E01A2.2	85	42.355	Caenorhabditis_elegans
ENSGACG00000020387	srrt	51	73.718	ENSCJAG00000014917	SRRT	95	63.594	Callithrix_jacchus
ENSGACG00000020387	srrt	96	62.801	ENSCAFG00000023538	SRRT	95	62.785	Canis_familiaris
ENSGACG00000020387	srrt	98	61.652	ENSCAFG00020013358	SRRT	99	60.941	Canis_lupus_dingo
ENSGACG00000020387	srrt	85	74.034	ENSCHIG00000010495	SRRT	95	62.486	Capra_hircus
ENSGACG00000020387	srrt	96	61.432	ENSTSYG00000036426	SRRT	99	62.053	Carlito_syrichta
ENSGACG00000020387	srrt	51	75.328	ENSCAPG00000013586	SRRT	100	63.711	Cavia_aperea
ENSGACG00000020387	srrt	51	73.932	ENSCPOG00000001739	SRRT	95	63.364	Cavia_porcellus
ENSGACG00000020387	srrt	51	74.359	ENSCCAG00000015877	SRRT	95	63.815	Cebus_capucinus
ENSGACG00000020387	srrt	51	74.464	ENSCATG00000036306	SRRT	97	62.714	Cercocebus_atys
ENSGACG00000020387	srrt	51	74.359	ENSCLAG00000007568	SRRT	93	69.014	Chinchilla_lanigera
ENSGACG00000020387	srrt	51	74.359	ENSCSAG00000017996	SRRT	95	63.479	Chlorocebus_sabaeus
ENSGACG00000020387	srrt	51	72.593	ENSCHOG00000007815	SRRT	70	65.982	Choloepus_hoffmanni
ENSGACG00000020387	srrt	73	65.779	ENSCPBG00000011553	SRRT	86	63.089	Chrysemys_picta_bellii
ENSGACG00000020387	srrt	100	41.828	ENSCING00000003506	-	86	44.430	Ciona_intestinalis
ENSGACG00000020387	srrt	100	42.140	ENSCSAVG00000008394	-	81	54.958	Ciona_savignyi
ENSGACG00000020387	srrt	51	74.624	ENSCANG00000034556	SRRT	95	63.815	Colobus_angolensis_palliatus
ENSGACG00000020387	srrt	51	74.573	ENSCGRG00001001594	Srrt	95	63.825	Cricetulus_griseus_chok1gshd
ENSGACG00000020387	srrt	69	78.205	ENSCGRG00000007292	Srrt	93	68.938	Cricetulus_griseus_crigri
ENSGACG00000020387	srrt	98	75.799	ENSCSEG00000017878	srrt	95	77.166	Cynoglossus_semilaevis
ENSGACG00000020387	srrt	52	62.474	ENSCSEG00000005233	-	58	62.828	Cynoglossus_semilaevis
ENSGACG00000020387	srrt	95	84.497	ENSCVAG00000019848	srrt	96	84.770	Cyprinodon_variegatus
ENSGACG00000020387	srrt	95	77.093	ENSDARG00000017762	srrt	95	77.648	Danio_rerio
ENSGACG00000020387	srrt	51	74.359	ENSDNOG00000003851	SRRT	95	63.237	Dasypus_novemcinctus
ENSGACG00000020387	srrt	96	63.426	ENSDORG00000005584	Srrt	97	68.317	Dipodomys_ordii
ENSGACG00000020387	srrt	92	51.931	FBgn0033062	Ars2	68	52.778	Drosophila_melanogaster
ENSGACG00000020387	srrt	74	71.639	ENSETEG00000016175	SRRT	73	70.323	Echinops_telfairi
ENSGACG00000020387	srrt	68	55.856	ENSEBUG00000008517	-	88	50.286	Eptatretus_burgeri
ENSGACG00000020387	srrt	51	74.359	ENSEASG00005016956	SRRT	95	63.242	Equus_asinus_asinus
ENSGACG00000020387	srrt	51	74.359	ENSECAG00000012292	SRRT	95	63.242	Equus_caballus
ENSGACG00000020387	srrt	80	73.737	ENSEEUG00000009117	SRRT	81	76.344	Erinaceus_europaeus
ENSGACG00000020387	srrt	92	57.615	ENSELUG00000021216	-	96	57.727	Esox_lucius
ENSGACG00000020387	srrt	95	74.083	ENSELUG00000006651	srrt	95	73.029	Esox_lucius
ENSGACG00000020387	srrt	51	74.359	ENSFCAG00000006855	SRRT	95	62.900	Felis_catus
ENSGACG00000020387	srrt	51	71.209	ENSFDAG00000021347	SRRT	95	66.392	Fukomys_damarensis
ENSGACG00000020387	srrt	53	56.148	ENSFHEG00000004105	-	99	55.289	Fundulus_heteroclitus
ENSGACG00000020387	srrt	76	89.683	ENSFHEG00000002756	srrt	90	89.764	Fundulus_heteroclitus
ENSGACG00000020387	srrt	95	76.686	ENSGMOG00000018619	srrt	95	75.740	Gadus_morhua
ENSGACG00000020387	srrt	65	65.393	ENSGMOG00000018694	-	71	64.493	Gadus_morhua
ENSGACG00000020387	srrt	95	84.005	ENSGAFG00000005423	srrt	96	84.416	Gambusia_affinis
ENSGACG00000020387	srrt	51	63.147	ENSGAFG00000020383	-	94	55.066	Gambusia_affinis
ENSGACG00000020387	srrt	51	74.624	ENSGGOG00000001508	SRRT	96	63.657	Gorilla_gorilla
ENSGACG00000020387	srrt	96	62.429	ENSHGLG00000008344	Srrt	95	68.064	Heterocephalus_glaber_female
ENSGACG00000020387	srrt	96	62.785	ENSHGLG00100018857	Srrt	95	68.889	Heterocephalus_glaber_male
ENSGACG00000020387	srrt	98	81.871	ENSHCOG00000005403	srrt	96	82.346	Hippocampus_comes
ENSGACG00000020387	srrt	92	53.106	ENSHCOG00000008904	-	94	54.317	Hippocampus_comes
ENSGACG00000020387	srrt	92	73.141	ENSIPUG00000021150	srrt	96	73.923	Ictalurus_punctatus
ENSGACG00000020387	srrt	51	74.624	ENSSTOG00000013776	SRRT	95	63.468	Ictidomys_tridecemlineatus
ENSGACG00000020387	srrt	96	63.415	ENSJJAG00000010446	Srrt	93	69.512	Jaculus_jaculus
ENSGACG00000020387	srrt	52	63.410	ENSKMAG00000008468	-	96	55.204	Kryptolebias_marmoratus
ENSGACG00000020387	srrt	95	80.404	ENSKMAG00000013599	srrt	96	84.912	Kryptolebias_marmoratus
ENSGACG00000020387	srrt	98	80.664	ENSLBEG00000016308	srrt	95	80.516	Labrus_bergylta
ENSGACG00000020387	srrt	95	53.855	ENSLACG00000001089	SRRT	95	55.285	Latimeria_chalumnae
ENSGACG00000020387	srrt	80	81.962	ENSLOCG00000013658	srrt	100	56.667	Lepisosteus_oculatus
ENSGACG00000020387	srrt	51	74.573	ENSLAFG00000007725	SRRT	95	63.014	Loxodonta_africana
ENSGACG00000020387	srrt	51	74.624	ENSMFAG00000033745	SRRT	99	62.743	Macaca_fascicularis
ENSGACG00000020387	srrt	96	61.991	ENSMMUG00000021255	SRRT	95	63.479	Macaca_mulatta
ENSGACG00000020387	srrt	51	74.359	ENSMNEG00000041864	SRRT	97	62.743	Macaca_nemestrina
ENSGACG00000020387	srrt	51	74.624	ENSMLEG00000029479	SRRT	98	62.971	Mandrillus_leucophaeus
ENSGACG00000020387	srrt	95	85.647	ENSMAMG00000014311	srrt	96	86.941	Mastacembelus_armatus
ENSGACG00000020387	srrt	52	65.672	ENSMAMG00000010681	-	96	57.326	Mastacembelus_armatus
ENSGACG00000020387	srrt	51	73.987	ENSMAUG00000011386	Srrt	95	68.452	Mesocricetus_auratus
ENSGACG00000020387	srrt	51	74.359	ENSMICG00000009471	SRRT	98	62.514	Microcebus_murinus
ENSGACG00000020387	srrt	51	74.359	ENSMOCG00000001971	Srrt	94	69.796	Microtus_ochrogaster
ENSGACG00000020387	srrt	95	82.423	ENSMMOG00000016399	srrt	95	82.227	Mola_mola
ENSGACG00000020387	srrt	83	55.200	ENSMMOG00000011137	-	99	52.113	Mola_mola
ENSGACG00000020387	srrt	51	70.276	ENSMODG00000004862	SRRT	95	68.056	Monodelphis_domestica
ENSGACG00000020387	srrt	52	52.268	ENSMALG00000005567	-	85	52.248	Monopterus_albus
ENSGACG00000020387	srrt	87	81.130	ENSMALG00000018604	srrt	98	77.209	Monopterus_albus
ENSGACG00000020387	srrt	51	75.764	MGP_CAROLIEiJ_G0027870	Srrt	98	72.624	Mus_caroli
ENSGACG00000020387	srrt	51	75.764	ENSMUSG00000037364	Srrt	97	72.624	Mus_musculus
ENSGACG00000020387	srrt	51	75.983	MGP_PahariEiJ_G0024456	Srrt	98	73.004	Mus_pahari
ENSGACG00000020387	srrt	51	75.764	MGP_SPRETEiJ_G0028875	Srrt	98	72.624	Mus_spretus
ENSGACG00000020387	srrt	51	74.359	ENSMPUG00000015839	SRRT	95	62.900	Mustela_putorius_furo
ENSGACG00000020387	srrt	51	74.145	ENSMLUG00000009975	SRRT	95	63.128	Myotis_lucifugus
ENSGACG00000020387	srrt	96	63.146	ENSNGAG00000023715	Srrt	100	62.846	Nannospalax_galili
ENSGACG00000020387	srrt	98	85.450	ENSNBRG00000019100	srrt	95	84.397	Neolamprologus_brichardi
ENSGACG00000020387	srrt	83	65.066	ENSNLEG00000011987	SRRT	99	57.093	Nomascus_leucogenys
ENSGACG00000020387	srrt	96	52.392	ENSMEUG00000011941	SRRT	94	53.702	Notamacropus_eugenii
ENSGACG00000020387	srrt	61	71.212	ENSOPRG00000002502	-	67	71.970	Ochotona_princeps
ENSGACG00000020387	srrt	51	75.546	ENSODEG00000016856	SRRT	95	68.826	Octodon_degus
ENSGACG00000020387	srrt	92	56.517	ENSONIG00000016080	-	95	56.899	Oreochromis_niloticus
ENSGACG00000020387	srrt	95	83.372	ENSONIG00000004242	srrt	96	83.641	Oreochromis_niloticus
ENSGACG00000020387	srrt	98	81.871	ENSORLG00000008120	srrt	96	82.388	Oryzias_latipes
ENSGACG00000020387	srrt	98	81.524	ENSORLG00020003058	srrt	96	82.000	Oryzias_latipes_hni
ENSGACG00000020387	srrt	98	81.755	ENSORLG00015008062	srrt	96	82.151	Oryzias_latipes_hsok
ENSGACG00000020387	srrt	92	57.041	ENSOMEG00000006963	-	95	57.728	Oryzias_melastigma
ENSGACG00000020387	srrt	98	82.448	ENSOMEG00000003155	srrt	94	86.299	Oryzias_melastigma
ENSGACG00000020387	srrt	51	74.359	ENSOGAG00000017242	SRRT	95	63.479	Otolemur_garnettii
ENSGACG00000020387	srrt	51	74.034	ENSOARG00000015645	SRRT	95	62.815	Ovis_aries
ENSGACG00000020387	srrt	51	74.624	ENSPPAG00000041090	SRRT	95	64.037	Pan_paniscus
ENSGACG00000020387	srrt	51	74.624	ENSPPRG00000009557	SRRT	95	63.001	Panthera_pardus
ENSGACG00000020387	srrt	51	74.359	ENSPTIG00000014355	SRRT	95	63.014	Panthera_tigris_altaica
ENSGACG00000020387	srrt	51	74.624	ENSPTRG00000019511	SRRT	99	61.163	Pan_troglodytes
ENSGACG00000020387	srrt	51	72.899	ENSPANG00000020763	SRRT	97	62.743	Papio_anubis
ENSGACG00000020387	srrt	98	73.311	ENSPKIG00000005434	srrt	95	73.605	Paramormyrops_kingsleyae
ENSGACG00000020387	srrt	94	69.726	ENSPKIG00000022212	-	96	69.871	Paramormyrops_kingsleyae
ENSGACG00000020387	srrt	51	75.604	ENSPSIG00000016311	SRRT	95	64.912	Pelodiscus_sinensis
ENSGACG00000020387	srrt	98	72.976	ENSPMGG00000002841	srrt	95	75.850	Periophthalmus_magnuspinnatus
ENSGACG00000020387	srrt	51	75.764	ENSPEMG00000010834	Srrt	95	68.889	Peromyscus_maniculatus_bairdii
ENSGACG00000020387	srrt	96	52.692	ENSPMAG00000009614	-	56	61.826	Petromyzon_marinus
ENSGACG00000020387	srrt	51	71.489	ENSPCIG00000000816	SRRT	95	63.356	Phascolarctos_cinereus
ENSGACG00000020387	srrt	95	84.379	ENSPFOG00000005704	srrt	96	84.670	Poecilia_formosa
ENSGACG00000020387	srrt	51	63.871	ENSPFOG00000016554	-	57	62.195	Poecilia_formosa
ENSGACG00000020387	srrt	95	83.451	ENSPLAG00000021992	srrt	96	83.743	Poecilia_latipinna
ENSGACG00000020387	srrt	51	63.519	ENSPLAG00000004526	-	94	54.900	Poecilia_latipinna
ENSGACG00000020387	srrt	95	84.024	ENSPMEG00000001182	srrt	95	86.128	Poecilia_mexicana
ENSGACG00000020387	srrt	95	84.179	ENSPREG00000022308	srrt	96	84.588	Poecilia_reticulata
ENSGACG00000020387	srrt	51	72.479	ENSPCAG00000001621	SRRT	95	62.128	Procavia_capensis
ENSGACG00000020387	srrt	51	74.624	ENSPCOG00000025751	SRRT	95	63.249	Propithecus_coquereli
ENSGACG00000020387	srrt	67	66.453	ENSPVAG00000000834	SRRT	100	56.328	Pteropus_vampyrus
ENSGACG00000020387	srrt	95	58.891	ENSPNAG00000010629	srrt	94	61.290	Pygocentrus_nattereri
ENSGACG00000020387	srrt	51	65.293	ENSRNOG00000048277	AABR07035787.1	97	63.768	Rattus_norvegicus
ENSGACG00000020387	srrt	51	74.359	ENSRBIG00000035718	SRRT	97	62.743	Rhinopithecus_bieti
ENSGACG00000020387	srrt	51	74.359	ENSRROG00000030622	SRRT	98	62.743	Rhinopithecus_roxellana
ENSGACG00000020387	srrt	51	74.624	ENSSBOG00000033570	SRRT	96	63.837	Saimiri_boliviensis_boliviensis
ENSGACG00000020387	srrt	51	71.398	ENSSHAG00000007349	-	99	60.987	Sarcophilus_harrisii
ENSGACG00000020387	srrt	94	75.685	ENSSFOG00015017293	srrt	95	75.607	Scleropages_formosus
ENSGACG00000020387	srrt	51	61.684	ENSSMAG00000018195	-	95	53.944	Scophthalmus_maximus
ENSGACG00000020387	srrt	95	88.124	ENSSMAG00000015342	srrt	96	88.389	Scophthalmus_maximus
ENSGACG00000020387	srrt	95	88.507	ENSSDUG00000012049	srrt	95	86.374	Seriola_dumerili
ENSGACG00000020387	srrt	52	54.105	ENSSDUG00000002051	-	99	53.162	Seriola_dumerili
ENSGACG00000020387	srrt	83	92.647	ENSSLDG00000017477	srrt	89	92.701	Seriola_lalandi_dorsalis
ENSGACG00000020387	srrt	51	56.587	ENSSPAG00000018943	-	99	55.466	Stegastes_partitus
ENSGACG00000020387	srrt	95	88.221	ENSSPAG00000005665	srrt	94	88.602	Stegastes_partitus
ENSGACG00000020387	srrt	98	82.609	ENSTRUG00000016075	srrt	96	82.864	Takifugu_rubripes
ENSGACG00000020387	srrt	90	53.580	ENSTRUG00000000023	-	94	54.177	Takifugu_rubripes
ENSGACG00000020387	srrt	92	52.278	ENSTNIG00000003111	-	95	55.245	Tetraodon_nigroviridis
ENSGACG00000020387	srrt	74	76.523	ENSTNIG00000011779	srrt	100	76.741	Tetraodon_nigroviridis
ENSGACG00000020387	srrt	58	78.723	ENSTBEG00000005212	SRRT	60	78.723	Tupaia_belangeri
ENSGACG00000020387	srrt	51	74.200	ENSTTRG00000011104	SRRT	96	63.056	Tursiops_truncatus
ENSGACG00000020387	srrt	51	74.359	ENSUAMG00000027997	SRRT	99	62.984	Ursus_americanus
ENSGACG00000020387	srrt	51	74.359	ENSUMAG00000011295	SRRT	95	63.128	Ursus_maritimus
ENSGACG00000020387	srrt	96	62.801	ENSVVUG00000023572	SRRT	95	62.785	Vulpes_vulpes
ENSGACG00000020387	srrt	72	73.481	ENSXETG00000025124	srrt	74	74.843	Xenopus_tropicalis
ENSGACG00000020387	srrt	53	51.363	ENSXCOG00000013105	-	95	51.782	Xiphophorus_couchianus
ENSGACG00000020387	srrt	98	83.410	ENSXMAG00000007627	srrt	96	84.298	Xiphophorus_maculatus
ENSGACG00000020387	srrt	51	63.499	ENSXMAG00000002090	-	94	54.697	Xiphophorus_maculatus