EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020440 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3834 bases
Position: chrgroupVII:18611320-18615153
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027030	RRM_5	PF13893.6	5e-12	1	2
ENSGACP00000027030	RRM_5	PF13893.6	5e-12	2	2
ENSGACP00000027030	RRM_1	PF00076.22	1.8e-31	1	2
ENSGACP00000027030	RRM_1	PF00076.22	1.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027082	-	1431	-	ENSGACP00000027030	476 (aa)	-	G3QAW4

Gene Model

Click here to download ENSGACG00000020440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020440	-	79	60.351	ENSAPOG00000021712	rbm14b	72	60.351	Acanthochromis_polyacanthus
ENSGACG00000020440	-	94	90.239	ENSAPOG00000003380	-	94	90.239	Acanthochromis_polyacanthus
ENSGACG00000020440	-	99	76.697	ENSACIG00000021173	-	99	76.881	Amphilophus_citrinellus
ENSGACG00000020440	-	79	60.351	ENSACIG00000000381	rbm14b	82	45.417	Amphilophus_citrinellus
ENSGACG00000020440	-	95	90.570	ENSAOCG00000001659	-	88	90.393	Amphiprion_ocellaris
ENSGACG00000020440	-	79	60.351	ENSAOCG00000008941	rbm14b	82	54.545	Amphiprion_ocellaris
ENSGACG00000020440	-	79	60.351	ENSAPEG00000003161	rbm14b	82	54.798	Amphiprion_percula
ENSGACG00000020440	-	94	90.949	ENSAPEG00000016988	-	88	90.393	Amphiprion_percula
ENSGACG00000020440	-	95	87.339	ENSATEG00000009700	-	87	87.339	Anabas_testudineus
ENSGACG00000020440	-	74	58.824	ENSATEG00000003034	rbm14b	78	57.286	Anabas_testudineus
ENSGACG00000020440	-	79	48.233	ENSACLG00000014355	rbm14b	98	44.597	Astatotilapia_calliptera
ENSGACG00000020440	-	100	77.555	ENSACLG00000009112	-	97	77.920	Astatotilapia_calliptera
ENSGACG00000020440	-	79	61.266	ENSAMXG00000007233	rbm14a	82	61.266	Astyanax_mexicanus
ENSGACG00000020440	-	75	47.991	ENSAMXG00000031225	rbm14b	86	46.908	Astyanax_mexicanus
ENSGACG00000020440	-	74	52.657	ENSCSEG00000000357	rbm14b	80	51.716	Cynoglossus_semilaevis
ENSGACG00000020440	-	95	83.983	ENSCSEG00000019690	-	90	84.416	Cynoglossus_semilaevis
ENSGACG00000020440	-	79	48.008	ENSCVAG00000013776	rbm14b	99	44.328	Cyprinodon_variegatus
ENSGACG00000020440	-	96	82.526	ENSCVAG00000014858	-	96	82.737	Cyprinodon_variegatus
ENSGACG00000020440	-	99	56.939	ENSDARG00000012723	rbm14a	99	58.471	Danio_rerio
ENSGACG00000020440	-	77	59.707	ENSDARG00000103834	rbm14b	99	45.439	Danio_rerio
ENSGACG00000020440	-	71	61.429	ENSELUG00000004690	rbm14b	72	61.071	Esox_lucius
ENSGACG00000020440	-	99	57.198	ENSELUG00000023633	rbm14a	99	56.322	Esox_lucius
ENSGACG00000020440	-	80	85.459	ENSFHEG00000020913	-	89	84.188	Fundulus_heteroclitus
ENSGACG00000020440	-	80	48.745	ENSFHEG00000021265	rbm14b	99	45.026	Fundulus_heteroclitus
ENSGACG00000020440	-	78	81.649	ENSGMOG00000010840	-	78	81.649	Gadus_morhua
ENSGACG00000020440	-	95	83.871	ENSGAFG00000004455	-	92	83.964	Gambusia_affinis
ENSGACG00000020440	-	56	60.777	ENSGAFG00000001924	rbm14b	99	43.966	Gambusia_affinis
ENSGACG00000020440	-	95	87.041	ENSHBUG00000003665	-	97	77.920	Haplochromis_burtoni
ENSGACG00000020440	-	79	48.233	ENSHBUG00000016754	rbm14b	98	44.940	Haplochromis_burtoni
ENSGACG00000020440	-	95	78.678	ENSHCOG00000004071	-	90	78.891	Hippocampus_comes
ENSGACG00000020440	-	85	52.594	ENSHCOG00000012571	rbm14b	99	65.409	Hippocampus_comes
ENSGACG00000020440	-	75	47.216	ENSIPUG00000009089	rbm14b	86	48.188	Ictalurus_punctatus
ENSGACG00000020440	-	79	56.311	ENSIPUG00000021256	rbm14a	83	56.204	Ictalurus_punctatus
ENSGACG00000020440	-	57	60.000	ENSKMAG00000020444	rbm14b	83	45.000	Kryptolebias_marmoratus
ENSGACG00000020440	-	94	79.792	ENSKMAG00000008514	-	88	83.624	Kryptolebias_marmoratus
ENSGACG00000020440	-	80	48.117	ENSLBEG00000027934	rbm14b	91	45.009	Labrus_bergylta
ENSGACG00000020440	-	100	81.564	ENSLBEG00000001217	-	100	80.819	Labrus_bergylta
ENSGACG00000020440	-	95	85.867	ENSMAMG00000021313	-	100	76.364	Mastacembelus_armatus
ENSGACG00000020440	-	99	42.308	ENSMAMG00000014394	rbm14b	94	44.251	Mastacembelus_armatus
ENSGACG00000020440	-	95	87.041	ENSMZEG00005001201	-	100	77.920	Maylandia_zebra
ENSGACG00000020440	-	79	48.233	ENSMZEG00005020834	rbm14b	99	44.768	Maylandia_zebra
ENSGACG00000020440	-	80	45.702	ENSMMOG00000012912	rbm14b	86	46.218	Mola_mola
ENSGACG00000020440	-	95	85.714	ENSMMOG00000014501	-	99	76.075	Mola_mola
ENSGACG00000020440	-	74	56.000	ENSMALG00000015445	rbm14b	83	56.021	Monopterus_albus
ENSGACG00000020440	-	79	48.233	ENSNBRG00000003378	rbm14b	99	44.940	Neolamprologus_brichardi
ENSGACG00000020440	-	99	77.390	ENSNBRG00000004960	-	99	77.574	Neolamprologus_brichardi
ENSGACG00000020440	-	74	58.556	ENSONIG00000013035	rbm14b	82	57.035	Oreochromis_niloticus
ENSGACG00000020440	-	100	85.396	ENSONIG00000008557	-	100	85.396	Oreochromis_niloticus
ENSGACG00000020440	-	79	49.266	ENSORLG00000008051	rbm14b	99	46.516	Oryzias_latipes
ENSGACG00000020440	-	95	84.848	ENSORLG00000001900	-	94	83.514	Oryzias_latipes
ENSGACG00000020440	-	79	49.266	ENSORLG00020005551	rbm14b	97	46.248	Oryzias_latipes_hni
ENSGACG00000020440	-	95	84.848	ENSORLG00020019144	-	94	83.514	Oryzias_latipes_hni
ENSGACG00000020440	-	95	84.848	ENSORLG00015000082	-	94	84.848	Oryzias_latipes_hsok
ENSGACG00000020440	-	79	49.057	ENSORLG00015022683	rbm14b	99	46.341	Oryzias_latipes_hsok
ENSGACG00000020440	-	78	87.117	ENSOMEG00000006508	-	96	92.000	Oryzias_melastigma
ENSGACG00000020440	-	78	53.985	ENSOMEG00000000910	rbm14b	99	50.304	Oryzias_melastigma
ENSGACG00000020440	-	78	50.000	ENSPKIG00000009078	rbm14b	85	49.345	Paramormyrops_kingsleyae
ENSGACG00000020440	-	78	60.351	ENSPMGG00000013064	rbm14b	83	61.372	Periophthalmus_magnuspinnatus
ENSGACG00000020440	-	86	79.854	ENSPMGG00000018869	-	93	85.135	Periophthalmus_magnuspinnatus
ENSGACG00000020440	-	79	48.017	ENSPFOG00000003614	rbm14b	99	44.828	Poecilia_formosa
ENSGACG00000020440	-	95	83.691	ENSPFOG00000004843	-	89	84.549	Poecilia_formosa
ENSGACG00000020440	-	79	47.390	ENSPLAG00000001395	rbm14b	99	44.655	Poecilia_latipinna
ENSGACG00000020440	-	95	83.691	ENSPLAG00000017359	-	89	84.549	Poecilia_latipinna
ENSGACG00000020440	-	100	84.017	ENSPMEG00000004894	-	93	84.881	Poecilia_mexicana
ENSGACG00000020440	-	79	47.182	ENSPMEG00000012911	rbm14b	99	44.483	Poecilia_mexicana
ENSGACG00000020440	-	74	47.672	ENSPREG00000003013	rbm14b	92	43.966	Poecilia_reticulata
ENSGACG00000020440	-	95	83.691	ENSPREG00000007274	-	89	84.549	Poecilia_reticulata
ENSGACG00000020440	-	79	47.817	ENSPNYG00000023605	rbm14b	99	44.768	Pundamilia_nyererei
ENSGACG00000020440	-	100	77.555	ENSPNYG00000015906	-	100	77.920	Pundamilia_nyererei
ENSGACG00000020440	-	99	55.796	ENSPNAG00000012473	rbm14a	84	58.151	Pygocentrus_nattereri
ENSGACG00000020440	-	75	47.661	ENSPNAG00000001977	rbm14b	83	47.234	Pygocentrus_nattereri
ENSGACG00000020440	-	75	50.569	ENSSFOG00015023796	rbm14b	99	44.956	Scleropages_formosus
ENSGACG00000020440	-	83	61.404	ENSSMAG00000004522	rbm14b	82	61.404	Scophthalmus_maximus
ENSGACG00000020440	-	95	89.588	ENSSMAG00000002055	-	89	89.154	Scophthalmus_maximus
ENSGACG00000020440	-	95	88.578	ENSSDUG00000020756	-	89	88.793	Seriola_dumerili
ENSGACG00000020440	-	79	47.095	ENSSDUG00000007975	rbm14b	82	47.510	Seriola_dumerili
ENSGACG00000020440	-	95	88.009	ENSSLDG00000006311	-	85	88.223	Seriola_lalandi_dorsalis
ENSGACG00000020440	-	79	47.095	ENSSLDG00000006472	rbm14b	82	47.510	Seriola_lalandi_dorsalis
ENSGACG00000020440	-	94	89.565	ENSSPAG00000010825	-	93	88.913	Stegastes_partitus
ENSGACG00000020440	-	79	60.351	ENSSPAG00000004231	rbm14b	67	61.594	Stegastes_partitus
ENSGACG00000020440	-	77	60.351	ENSTRUG00000005716	rbm14b	99	43.154	Takifugu_rubripes
ENSGACG00000020440	-	95	81.264	ENSTRUG00000009504	-	84	81.264	Takifugu_rubripes
ENSGACG00000020440	-	100	77.708	ENSTNIG00000000058	-	100	77.708	Tetraodon_nigroviridis
ENSGACG00000020440	-	74	54.011	ENSTNIG00000006844	rbm14b	99	48.893	Tetraodon_nigroviridis
ENSGACG00000020440	-	99	81.343	ENSXCOG00000006825	-	92	82.090	Xiphophorus_couchianus
ENSGACG00000020440	-	79	47.390	ENSXMAG00000008390	rbm14b	99	44.828	Xiphophorus_maculatus
ENSGACG00000020440	-	100	83.262	ENSXMAG00000000338	-	94	84.120	Xiphophorus_maculatus