EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020459 (Gene tree)
Gene ID: -
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3507 bases
Position: chrgroupVII:18937635-18941141
Accession: ZDB-GENE-040426-1578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027053	RRM_1	PF00076.22	3e-16	1	2
ENSGACP00000027053	RRM_1	PF00076.22	3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027105	-	1525	-	ENSGACP00000027053	442 (aa)	-	G3QAY7

Gene Model

Click here to download ENSGACG00000020459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020459	htatsf1	97	58.486	ENSG00000102241	HTATSF1	100	58.824	Homo_sapiens
ENSGACG00000020459	htatsf1	100	79.241	ENSAPOG00000009823	htatsf1	100	79.241	Acanthochromis_polyacanthus
ENSGACG00000020459	htatsf1	97	56.979	ENSAMEG00000002921	HTATSF1	53	58.118	Ailuropoda_melanoleuca
ENSGACG00000020459	htatsf1	100	77.655	ENSACIG00000020459	htatsf1	100	79.204	Amphilophus_citrinellus
ENSGACG00000020459	htatsf1	100	78.214	ENSAOCG00000020994	htatsf1	100	78.649	Amphiprion_ocellaris
ENSGACG00000020459	htatsf1	100	78.509	ENSAPEG00000016432	htatsf1	100	78.993	Amphiprion_percula
ENSGACG00000020459	htatsf1	94	79.426	ENSATEG00000008903	htatsf1	94	79.426	Anabas_testudineus
ENSGACG00000020459	htatsf1	91	62.500	ENSAPLG00000012401	HTATSF1	99	62.500	Anas_platyrhynchos
ENSGACG00000020459	htatsf1	79	63.277	ENSACAG00000009346	HTATSF1	98	59.801	Anolis_carolinensis
ENSGACG00000020459	htatsf1	87	58.442	ENSANAG00000025458	-	51	60.263	Aotus_nancymaae
ENSGACG00000020459	htatsf1	100	76.872	ENSACLG00000008096	htatsf1	100	77.753	Astatotilapia_calliptera
ENSGACG00000020459	htatsf1	99	67.532	ENSAMXG00000008387	htatsf1	99	67.532	Astyanax_mexicanus
ENSGACG00000020459	htatsf1	86	62.629	ENSBTAG00000032711	HTATSF1	50	62.629	Bos_taurus
ENSGACG00000020459	htatsf1	77	42.075	WBGene00022025	Y65B4A.1	75	42.075	Caenorhabditis_elegans
ENSGACG00000020459	htatsf1	86	62.274	ENSCAFG00000023294	HTATSF1	50	62.982	Canis_familiaris
ENSGACG00000020459	htatsf1	96	58.621	ENSTSYG00000028876	HTATSF1	54	59.670	Carlito_syrichta
ENSGACG00000020459	htatsf1	81	61.035	ENSCCAG00000025329	-	54	61.818	Cebus_capucinus
ENSGACG00000020459	htatsf1	97	57.895	ENSCATG00000029963	HTATSF1	54	58.920	Cercocebus_atys
ENSGACG00000020459	htatsf1	97	57.895	ENSCSAG00000007505	HTATSF1	54	58.920	Chlorocebus_sabaeus
ENSGACG00000020459	htatsf1	99	60.486	ENSCPBG00000026092	HTATSF1	98	61.087	Chrysemys_picta_bellii
ENSGACG00000020459	htatsf1	87	45.619	ENSCING00000005914	-	95	45.361	Ciona_intestinalis
ENSGACG00000020459	htatsf1	91	41.555	ENSCSAVG00000000371	-	92	41.287	Ciona_savignyi
ENSGACG00000020459	htatsf1	97	58.257	ENSCANG00000028495	HTATSF1	54	59.294	Colobus_angolensis_palliatus
ENSGACG00000020459	htatsf1	100	75.615	ENSCVAG00000014070	htatsf1	99	77.405	Cyprinodon_variegatus
ENSGACG00000020459	htatsf1	100	68.192	ENSDARG00000056649	htatsf1	100	68.433	Danio_rerio
ENSGACG00000020459	htatsf1	99	58.206	ENSDNOG00000002254	HTATSF1	56	58.206	Dasypus_novemcinctus
ENSGACG00000020459	htatsf1	79	43.280	FBgn0037081	barc	62	44.986	Drosophila_melanogaster
ENSGACG00000020459	htatsf1	92	52.558	ENSEBUG00000001534	htatsf1	84	53.302	Eptatretus_burgeri
ENSGACG00000020459	htatsf1	97	57.339	ENSEASG00005003440	HTATSF1	52	58.768	Equus_asinus_asinus
ENSGACG00000020459	htatsf1	97	57.339	ENSECAG00000009156	HTATSF1	52	58.768	Equus_caballus
ENSGACG00000020459	htatsf1	99	63.537	ENSELUG00000005486	htatsf1	90	64.208	Esox_lucius
ENSGACG00000020459	htatsf1	94	57.882	ENSFCAG00000031924	HTATSF1	54	57.882	Felis_catus
ENSGACG00000020459	htatsf1	99	58.425	ENSFALG00000003728	HTATSF1	99	58.425	Ficedula_albicollis
ENSGACG00000020459	htatsf1	96	58.391	ENSFDAG00000008617	HTATSF1	54	59.811	Fukomys_damarensis
ENSGACG00000020459	htatsf1	100	78.571	ENSFHEG00000020286	htatsf1	100	78.571	Fundulus_heteroclitus
ENSGACG00000020459	htatsf1	81	73.278	ENSGMOG00000016444	htatsf1	100	73.278	Gadus_morhua
ENSGACG00000020459	htatsf1	99	60.352	ENSGALG00000006410	HTATSF1	99	60.573	Gallus_gallus
ENSGACG00000020459	htatsf1	100	76.286	ENSGAFG00000003041	htatsf1	98	76.286	Gambusia_affinis
ENSGACG00000020459	htatsf1	97	58.486	ENSGGOG00000026072	HTATSF1	54	59.529	Gorilla_gorilla
ENSGACG00000020459	htatsf1	100	77.093	ENSHBUG00000004392	htatsf1	100	77.753	Haplochromis_burtoni
ENSGACG00000020459	htatsf1	99	70.295	ENSHCOG00000009056	htatsf1	99	71.236	Hippocampus_comes
ENSGACG00000020459	htatsf1	99	64.756	ENSIPUG00000017828	htatsf1	99	66.170	Ictalurus_punctatus
ENSGACG00000020459	htatsf1	97	58.904	ENSSTOG00000012505	HTATSF1	55	59.953	Ictidomys_tridecemlineatus
ENSGACG00000020459	htatsf1	100	78.667	ENSKMAG00000007622	htatsf1	100	78.667	Kryptolebias_marmoratus
ENSGACG00000020459	htatsf1	100	78.634	ENSLBEG00000001154	htatsf1	100	79.295	Labrus_bergylta
ENSGACG00000020459	htatsf1	99	58.520	ENSLACG00000015989	HTATSF1	99	58.520	Latimeria_chalumnae
ENSGACG00000020459	htatsf1	99	44.946	ENSLOCG00000015118	htatsf1	99	44.989	Lepisosteus_oculatus
ENSGACG00000020459	htatsf1	94	59.719	ENSLAFG00000014307	HTATSF1	60	59.016	Loxodonta_africana
ENSGACG00000020459	htatsf1	97	57.895	ENSMFAG00000044705	HTATSF1	54	58.920	Macaca_fascicularis
ENSGACG00000020459	htatsf1	97	57.895	ENSMMUG00000006450	HTATSF1	54	58.920	Macaca_mulatta
ENSGACG00000020459	htatsf1	97	57.895	ENSMNEG00000024084	HTATSF1	60	58.920	Macaca_nemestrina
ENSGACG00000020459	htatsf1	97	57.895	ENSMLEG00000035511	HTATSF1	54	58.920	Mandrillus_leucophaeus
ENSGACG00000020459	htatsf1	99	76.063	ENSMAMG00000021225	htatsf1	99	76.286	Mastacembelus_armatus
ENSGACG00000020459	htatsf1	100	77.313	ENSMZEG00005000485	htatsf1	100	77.974	Maylandia_zebra
ENSGACG00000020459	htatsf1	95	60.789	ENSMGAG00000003558	HTATSF1	99	61.021	Meleagris_gallopavo
ENSGACG00000020459	htatsf1	82	62.432	ENSMAUG00000007235	Htatsf1	50	63.049	Mesocricetus_auratus
ENSGACG00000020459	htatsf1	97	57.931	ENSMICG00000009348	HTATSF1	55	58.962	Microcebus_murinus
ENSGACG00000020459	htatsf1	82	63.415	ENSMOCG00000023007	-	50	64.083	Microtus_ochrogaster
ENSGACG00000020459	htatsf1	100	77.803	ENSMMOG00000011013	htatsf1	100	77.803	Mola_mola
ENSGACG00000020459	htatsf1	57	61.686	ENSMODG00000000199	-	92	60.246	Monodelphis_domestica
ENSGACG00000020459	htatsf1	99	60.879	ENSMODG00000014087	-	97	60.879	Monodelphis_domestica
ENSGACG00000020459	htatsf1	100	77.951	ENSMALG00000019977	htatsf1	100	77.951	Monopterus_albus
ENSGACG00000020459	htatsf1	82	61.351	MGP_CAROLIEiJ_G0033094	Htatsf1	50	62.113	Mus_caroli
ENSGACG00000020459	htatsf1	97	57.666	ENSMPUG00000001901	HTATSF1	53	58.824	Mustela_putorius_furo
ENSGACG00000020459	htatsf1	84	62.895	ENSMLUG00000009234	-	50	62.895	Myotis_lucifugus
ENSGACG00000020459	htatsf1	96	57.773	ENSMLUG00000028418	-	54	57.773	Myotis_lucifugus
ENSGACG00000020459	htatsf1	82	61.995	ENSNGAG00000017831	Htatsf1	51	62.725	Nannospalax_galili
ENSGACG00000020459	htatsf1	100	76.432	ENSNBRG00000003818	htatsf1	100	77.313	Neolamprologus_brichardi
ENSGACG00000020459	htatsf1	97	58.486	ENSNLEG00000002746	HTATSF1	54	59.529	Nomascus_leucogenys
ENSGACG00000020459	htatsf1	90	64.039	ENSMEUG00000004133	-	93	63.793	Notamacropus_eugenii
ENSGACG00000020459	htatsf1	100	77.313	ENSONIG00000008638	htatsf1	100	77.974	Oreochromis_niloticus
ENSGACG00000020459	htatsf1	91	60.526	ENSOANG00000011674	-	98	60.526	Ornithorhynchus_anatinus
ENSGACG00000020459	htatsf1	99	58.093	ENSOCUG00000012570	HTATSF1	57	58.093	Oryctolagus_cuniculus
ENSGACG00000020459	htatsf1	100	75.991	ENSORLG00000002356	htatsf1	100	76.652	Oryzias_latipes
ENSGACG00000020459	htatsf1	100	75.219	ENSORLG00020017818	htatsf1	97	75.877	Oryzias_latipes_hni
ENSGACG00000020459	htatsf1	100	75.551	ENSORLG00015002268	htatsf1	100	76.211	Oryzias_latipes_hsok
ENSGACG00000020459	htatsf1	100	77.263	ENSOMEG00000007564	htatsf1	100	77.263	Oryzias_melastigma
ENSGACG00000020459	htatsf1	95	56.876	ENSOGAG00000005565	HTATSF1	53	58.950	Otolemur_garnettii
ENSGACG00000020459	htatsf1	97	58.486	ENSPPAG00000024268	HTATSF1	54	59.529	Pan_paniscus
ENSGACG00000020459	htatsf1	94	58.353	ENSPPRG00000014209	HTATSF1	54	58.353	Panthera_pardus
ENSGACG00000020459	htatsf1	97	58.486	ENSPTRG00000044591	HTATSF1	54	59.529	Pan_troglodytes
ENSGACG00000020459	htatsf1	99	67.184	ENSPKIG00000024852	htatsf1	99	67.184	Paramormyrops_kingsleyae
ENSGACG00000020459	htatsf1	76	64.265	ENSPSIG00000010192	HTATSF1	97	64.689	Pelodiscus_sinensis
ENSGACG00000020459	htatsf1	99	71.778	ENSPMGG00000006172	htatsf1	99	71.778	Periophthalmus_magnuspinnatus
ENSGACG00000020459	htatsf1	90	64.146	ENSPCIG00000030173	-	90	64.146	Phascolarctos_cinereus
ENSGACG00000020459	htatsf1	99	56.570	ENSPCIG00000018896	-	98	56.570	Phascolarctos_cinereus
ENSGACG00000020459	htatsf1	100	77.852	ENSPFOG00000007871	htatsf1	97	77.852	Poecilia_formosa
ENSGACG00000020459	htatsf1	100	78.300	ENSPLAG00000007532	htatsf1	100	78.300	Poecilia_latipinna
ENSGACG00000020459	htatsf1	100	77.181	ENSPMEG00000000352	htatsf1	100	77.181	Poecilia_mexicana
ENSGACG00000020459	htatsf1	100	77.629	ENSPREG00000007811	htatsf1	100	77.629	Poecilia_reticulata
ENSGACG00000020459	htatsf1	99	57.778	ENSPPYG00000020765	HTATSF1	57	57.778	Pongo_abelii
ENSGACG00000020459	htatsf1	85	57.441	ENSPCAG00000010576	HTATSF1	52	57.441	Procavia_capensis
ENSGACG00000020459	htatsf1	97	57.895	ENSPCOG00000021823	HTATSF1	54	58.920	Propithecus_coquereli
ENSGACG00000020459	htatsf1	94	59.059	ENSPVAG00000010281	HTATSF1	58	59.059	Pteropus_vampyrus
ENSGACG00000020459	htatsf1	100	77.093	ENSPNYG00000016693	htatsf1	100	77.974	Pundamilia_nyererei
ENSGACG00000020459	htatsf1	99	67.333	ENSPNAG00000006166	htatsf1	99	68.230	Pygocentrus_nattereri
ENSGACG00000020459	htatsf1	97	58.257	ENSRROG00000021939	HTATSF1	54	59.294	Rhinopithecus_roxellana
ENSGACG00000020459	htatsf1	90	64.706	ENSSHAG00000018908	-	87	64.706	Sarcophilus_harrisii
ENSGACG00000020459	htatsf1	86	64.416	ENSSHAG00000006440	-	97	64.416	Sarcophilus_harrisii
ENSGACG00000020459	htatsf1	99	60.730	ENSSFOG00015012002	htatsf1	99	61.373	Scleropages_formosus
ENSGACG00000020459	htatsf1	100	75.381	ENSSMAG00000002970	htatsf1	100	75.599	Scophthalmus_maximus
ENSGACG00000020459	htatsf1	100	75.501	ENSSDUG00000020002	htatsf1	99	75.947	Seriola_dumerili
ENSGACG00000020459	htatsf1	100	80.000	ENSSLDG00000016880	htatsf1	100	80.444	Seriola_lalandi_dorsalis
ENSGACG00000020459	htatsf1	95	56.279	ENSSARG00000005193	HTATSF1	57	56.471	Sorex_araneus
ENSGACG00000020459	htatsf1	99	60.486	ENSSPUG00000014767	HTATSF1	98	60.619	Sphenodon_punctatus
ENSGACG00000020459	htatsf1	100	78.289	ENSSPAG00000000732	htatsf1	99	79.560	Stegastes_partitus
ENSGACG00000020459	htatsf1	82	62.903	ENSSSCG00000023062	HTATSF1	60	59.112	Sus_scrofa
ENSGACG00000020459	htatsf1	98	59.111	ENSTGUG00000002099	HTATSF1	98	59.111	Taeniopygia_guttata
ENSGACG00000020459	htatsf1	100	75.336	ENSTRUG00000013383	htatsf1	100	75.336	Takifugu_rubripes
ENSGACG00000020459	htatsf1	100	74.215	ENSTNIG00000016140	htatsf1	99	74.215	Tetraodon_nigroviridis
ENSGACG00000020459	htatsf1	78	62.040	ENSTTRG00000002269	HTATSF1	58	62.040	Tursiops_truncatus
ENSGACG00000020459	htatsf1	97	57.437	ENSUAMG00000012048	HTATSF1	54	58.588	Ursus_americanus
ENSGACG00000020459	htatsf1	97	57.437	ENSUMAG00000010393	HTATSF1	53	58.588	Ursus_maritimus
ENSGACG00000020459	htatsf1	82	53.846	ENSVPAG00000004569	HTATSF1	50	52.342	Vicugna_pacos
ENSGACG00000020459	htatsf1	99	58.278	ENSXETG00000019749	htatsf1	85	58.278	Xenopus_tropicalis
ENSGACG00000020459	htatsf1	97	76.798	ENSXCOG00000006912	htatsf1	97	76.798	Xiphophorus_couchianus
ENSGACG00000020459	htatsf1	99	77.778	ENSXMAG00000000490	htatsf1	99	77.778	Xiphophorus_maculatus