EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000020514 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5017 bases
Position: chrgroupVII:19394340-19399356
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027124	MMR_HSR1	PF01926.23	4.4e-05	1	1
ENSGACP00000027125	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027176	-	1306	-	ENSGACP00000027124	262 (aa)	-	G3QB58
ENSGACT00000027177	-	774	-	ENSGACP00000027125	257 (aa)	-	G3QB59

Gene Model

Click here to download ENSGACG00000020514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020514	rab34b	65	36.527	ENSGACG00000014905	rab2a	77	36.527
ENSGACG00000020514	rab34b	82	33.028	ENSGACG00000018745	rab33a	88	33.028
ENSGACG00000020514	rab34b	77	33.500	ENSGACG00000020437	-	96	33.500
ENSGACG00000020514	rab34b	62	31.250	ENSGACG00000005608	rab22a	81	31.250
ENSGACG00000020514	rab34b	63	32.727	ENSGACG00000009647	RAB7A	79	32.727
ENSGACG00000020514	rab34b	66	37.278	ENSGACG00000005979	RAB15	80	37.278
ENSGACG00000020514	rab34b	63	40.373	ENSGACG00000020356	rab6a	76	40.373
ENSGACG00000020514	rab34b	66	35.503	ENSGACG00000007722	rab15	87	37.162
ENSGACG00000020514	rab34b	68	34.463	ENSGACG00000016164	rab4a	77	34.463
ENSGACG00000020514	rab34b	99	66.537	ENSGACG00000011190	rab34a	97	66.537
ENSGACG00000020514	rab34b	79	31.884	ENSGACG00000019767	-	94	31.884
ENSGACG00000020514	rab34b	60	33.987	ENSGACG00000016395	rab18b	73	33.987
ENSGACG00000020514	rab34b	79	31.884	ENSGACG00000013249	rab25b	92	31.884
ENSGACG00000020514	rab34b	63	39.264	ENSGACG00000019642	-	79	39.264
ENSGACG00000020514	rab34b	98	50.570	ENSGACG00000014678	rab36	97	50.570
ENSGACG00000020514	rab34b	63	32.727	ENSGACG00000000807	-	80	32.727
ENSGACG00000020514	rab34b	61	38.608	ENSGACG00000001950	RAB39B	73	38.608
ENSGACG00000020514	rab34b	63	32.716	ENSGACG00000013611	-	78	32.716
ENSGACG00000020514	rab34b	60	35.443	ENSGACG00000018291	rab9b	76	35.443
ENSGACG00000020514	rab34b	63	40.964	ENSGACG00000013401	zgc:171927	81	40.964
ENSGACG00000020514	rab34b	62	38.750	ENSGACG00000016799	-	91	38.750
ENSGACG00000020514	rab34b	66	36.095	ENSGACG00000014915	si:dkey-16l2.16	94	34.123
ENSGACG00000020514	rab34b	63	37.888	ENSGACG00000013721	rab6bb	76	37.888
ENSGACG00000020514	rab34b	57	30.137	ENSGACG00000011340	hrasb	81	31.847
ENSGACG00000020514	rab34b	63	38.272	ENSGACG00000012006	rab30	80	38.272
ENSGACG00000020514	rab34b	63	38.650	ENSGACG00000003864	rab1ab	79	38.650
ENSGACG00000020514	rab34b	80	36.058	ENSGACG00000013548	rab35b	97	36.058
ENSGACG00000020514	rab34b	67	34.104	ENSGACG00000005397	si:ch211-247i17.1	98	34.104
ENSGACG00000020514	rab34b	78	36.098	ENSGACG00000011925	rab13	94	36.098
ENSGACG00000020514	rab34b	62	38.037	ENSGACG00000019540	rab33ba	73	38.037
ENSGACG00000020514	rab34b	80	33.493	ENSGACG00000013259	rab11al	94	33.493
ENSGACG00000020514	rab34b	70	32.044	ENSGACG00000016639	rab12	80	32.044
ENSGACG00000020514	rab34b	62	30.247	ENSGACG00000003972	rab9a	78	30.247
ENSGACG00000020514	rab34b	69	37.433	ENSGACG00000003726	rab6ba	86	37.433
ENSGACG00000020514	rab34b	63	39.752	ENSGACG00000017153	rab41	75	39.752
ENSGACG00000020514	rab34b	70	32.597	ENSGACG00000018847	-	79	32.597
ENSGACG00000020514	rab34b	61	32.298	ENSGACG00000014578	RAB9A	80	32.298
ENSGACG00000020514	rab34b	79	33.824	ENSGACG00000004997	rab5aa	89	33.824
ENSGACG00000020514	rab34b	60	35.294	ENSGACG00000001694	rab18a	83	32.955
ENSGACG00000020514	rab34b	58	36.913	ENSGACG00000006151	rab23	66	39.375
ENSGACG00000020514	rab34b	80	30.233	ENSGACG00000004965	rab25a	96	30.233
ENSGACG00000020514	rab34b	62	33.750	ENSGACG00000008659	rab5c	88	32.353
ENSGACG00000020514	rab34b	79	30.392	ENSGACG00000006162	-	88	30.392
ENSGACG00000020514	rab34b	63	38.650	ENSGACG00000000789	rab1ba	78	38.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020514	rab34b	88	85.776	ENSAPOG00000019147	rab34b	96	80.100	Acanthochromis_polyacanthus
ENSGACG00000020514	rab34b	99	76.953	ENSACIG00000004859	rab34b	99	76.953	Amphilophus_citrinellus
ENSGACG00000020514	rab34b	100	86.047	ENSAOCG00000007106	rab34b	94	86.047	Amphiprion_ocellaris
ENSGACG00000020514	rab34b	85	91.324	ENSAPEG00000018607	rab34b	86	85.892	Amphiprion_percula
ENSGACG00000020514	rab34b	93	82.917	ENSATEG00000006851	rab34b	95	82.377	Anabas_testudineus
ENSGACG00000020514	rab34b	99	89.453	ENSACLG00000005733	rab34b	96	89.453	Astatotilapia_calliptera
ENSGACG00000020514	rab34b	99	69.141	ENSAMXG00000006018	rab34b	99	69.531	Astyanax_mexicanus
ENSGACG00000020514	rab34b	91	82.203	ENSCSEG00000018133	rab34b	94	82.203	Cynoglossus_semilaevis
ENSGACG00000020514	rab34b	99	72.835	ENSDARG00000010977	rab34b	98	72.835	Danio_rerio
ENSGACG00000020514	rab34b	99	81.250	ENSELUG00000005597	rab34b	99	81.250	Esox_lucius
ENSGACG00000020514	rab34b	99	84.706	ENSFHEG00000004532	rab34b	100	84.706	Fundulus_heteroclitus
ENSGACG00000020514	rab34b	81	81.250	ENSGMOG00000007140	rab34b	100	81.250	Gadus_morhua
ENSGACG00000020514	rab34b	99	68.110	ENSIPUG00000024531	rab34	98	68.110	Ictalurus_punctatus
ENSGACG00000020514	rab34b	99	85.882	ENSKMAG00000019341	rab34b	100	85.882	Kryptolebias_marmoratus
ENSGACG00000020514	rab34b	99	87.451	ENSLBEG00000027819	rab34b	100	87.451	Labrus_bergylta
ENSGACG00000020514	rab34b	99	86.275	ENSMAMG00000020214	rab34b	100	86.275	Mastacembelus_armatus
ENSGACG00000020514	rab34b	100	84.436	ENSMMOG00000010936	rab34b	87	84.436	Mola_mola
ENSGACG00000020514	rab34b	92	86.975	ENSMALG00000018499	rab34b	89	86.975	Monopterus_albus
ENSGACG00000020514	rab34b	99	88.235	ENSONIG00000005519	rab34b	100	88.235	Oreochromis_niloticus
ENSGACG00000020514	rab34b	99	83.984	ENSORLG00000003119	rab34b	92	83.984	Oryzias_latipes
ENSGACG00000020514	rab34b	99	84.375	ENSORLG00020016139	rab34b	92	84.375	Oryzias_latipes_hni
ENSGACG00000020514	rab34b	99	84.766	ENSORLG00015000584	rab34b	92	84.766	Oryzias_latipes_hsok
ENSGACG00000020514	rab34b	100	85.603	ENSOMEG00000010334	rab34b	98	84.426	Oryzias_melastigma
ENSGACG00000020514	rab34b	99	67.578	ENSPKIG00000013326	rab34b	99	67.578	Paramormyrops_kingsleyae
ENSGACG00000020514	rab34b	99	83.594	ENSPMGG00000021697	rab34b	99	83.594	Periophthalmus_magnuspinnatus
ENSGACG00000020514	rab34b	99	84.375	ENSPFOG00000011444	rab34b	100	84.375	Poecilia_formosa
ENSGACG00000020514	rab34b	99	84.314	ENSPLAG00000005074	rab34b	100	84.314	Poecilia_latipinna
ENSGACG00000020514	rab34b	99	84.314	ENSPMEG00000013297	rab34b	100	84.314	Poecilia_mexicana
ENSGACG00000020514	rab34b	99	84.314	ENSPREG00000009813	rab34b	100	84.314	Poecilia_reticulata
ENSGACG00000020514	rab34b	99	78.125	ENSPNYG00000017153	rab34b	99	92.090	Pundamilia_nyererei
ENSGACG00000020514	rab34b	92	71.730	ENSPNAG00000015040	rab34b	99	71.730	Pygocentrus_nattereri
ENSGACG00000020514	rab34b	99	69.650	ENSSFOG00015005188	rab34	99	69.650	Scleropages_formosus
ENSGACG00000020514	rab34b	92	87.764	ENSSMAG00000019926	rab34b	100	85.232	Scophthalmus_maximus
ENSGACG00000020514	rab34b	99	92.188	ENSSDUG00000016760	rab34b	80	92.188	Seriola_dumerili
ENSGACG00000020514	rab34b	72	94.022	ENSSLDG00000014812	rab34b	92	93.617	Seriola_lalandi_dorsalis
ENSGACG00000020514	rab34b	99	87.451	ENSSPAG00000002801	rab34b	100	87.451	Stegastes_partitus
ENSGACG00000020514	rab34b	94	83.058	ENSTRUG00000014481	rab34b	98	83.058	Takifugu_rubripes
ENSGACG00000020514	rab34b	100	82.490	ENSTNIG00000016158	rab34b	99	82.490	Tetraodon_nigroviridis