EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020575 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 17086 bases
Position: chrgroupVII:20539803-20556888
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027206	Exo_endo_phos	PF03372.23	2.4e-07	1	1
ENSGACP00000027206	DUF1866	PF08952.11	1.5e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027259	-	1563	-	ENSGACP00000027207	521 (aa)	-	G3QBE1
ENSGACT00000027258	-	3921	-	ENSGACP00000027206	1307 (aa)	-	G3QBE0

Gene Model

Click here to download ENSGACG00000020575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020575	synj1	93	65.800	ENSG00000159082	SYNJ1	100	82.022	Homo_sapiens
ENSGACG00000020575	synj1	99	83.148	ENSAPOG00000002809	synj1	99	83.198	Acanthochromis_polyacanthus
ENSGACG00000020575	synj1	94	64.030	ENSAMEG00000015028	SYNJ1	67	71.194	Ailuropoda_melanoleuca
ENSGACG00000020575	synj1	100	82.605	ENSACIG00000008857	synj1	99	82.808	Amphilophus_citrinellus
ENSGACG00000020575	synj1	99	85.650	ENSAOCG00000009835	synj1	99	84.598	Amphiprion_ocellaris
ENSGACG00000020575	synj1	99	85.347	ENSAPEG00000021010	synj1	79	86.521	Amphiprion_percula
ENSGACG00000020575	synj1	99	85.208	ENSATEG00000002306	synj1	79	85.305	Anabas_testudineus
ENSGACG00000020575	synj1	99	61.354	ENSAPLG00000011832	SYNJ1	68	70.962	Anas_platyrhynchos
ENSGACG00000020575	synj1	97	64.451	ENSACAG00000003006	-	84	72.611	Anolis_carolinensis
ENSGACG00000020575	synj1	93	65.015	ENSANAG00000027325	SYNJ1	84	70.898	Aotus_nancymaae
ENSGACG00000020575	synj1	99	84.691	ENSACLG00000002255	synj1	99	83.869	Astatotilapia_calliptera
ENSGACG00000020575	synj1	99	80.473	ENSAMXG00000008208	synj1	80	79.833	Astyanax_mexicanus
ENSGACG00000020575	synj1	99	63.820	ENSBTAG00000003063	SYNJ1	82	71.376	Bos_taurus
ENSGACG00000020575	synj1	95	64.760	ENSCJAG00000009187	SYNJ1	84	70.924	Callithrix_jacchus
ENSGACG00000020575	synj1	95	66.048	ENSCAFG00000009041	SYNJ1	99	62.603	Canis_familiaris
ENSGACG00000020575	synj1	94	67.608	ENSCAFG00020025776	SYNJ1	97	61.521	Canis_lupus_dingo
ENSGACG00000020575	synj1	89	69.983	ENSCHIG00000005095	SYNJ1	82	63.162	Capra_hircus
ENSGACG00000020575	synj1	94	67.089	ENSTSYG00000014541	SYNJ1	85	70.535	Carlito_syrichta
ENSGACG00000020575	synj1	86	62.051	ENSCAPG00000014483	SYNJ1	74	63.662	Cavia_aperea
ENSGACG00000020575	synj1	90	68.305	ENSCPOG00000012182	SYNJ1	99	62.537	Cavia_porcellus
ENSGACG00000020575	synj1	93	65.719	ENSCCAG00000020825	SYNJ1	84	70.988	Cebus_capucinus
ENSGACG00000020575	synj1	93	66.507	ENSCATG00000033891	SYNJ1	99	63.102	Cercocebus_atys
ENSGACG00000020575	synj1	94	63.146	ENSCLAG00000009796	SYNJ1	98	76.012	Chinchilla_lanigera
ENSGACG00000020575	synj1	93	64.012	ENSCSAG00000009654	SYNJ1	83	70.898	Chlorocebus_sabaeus
ENSGACG00000020575	synj1	62	72.491	ENSCHOG00000012390	SYNJ1	52	72.491	Choloepus_hoffmanni
ENSGACG00000020575	synj1	90	67.623	ENSCPBG00000006402	SYNJ1	87	71.429	Chrysemys_picta_bellii
ENSGACG00000020575	synj1	93	65.485	ENSCANG00000031359	SYNJ1	84	70.898	Colobus_angolensis_palliatus
ENSGACG00000020575	synj1	89	68.880	ENSCGRG00001010861	Synj1	99	63.094	Cricetulus_griseus_chok1gshd
ENSGACG00000020575	synj1	89	65.277	ENSCGRG00000015749	Synj1	98	75.578	Cricetulus_griseus_crigri
ENSGACG00000020575	synj1	96	80.655	ENSCSEG00000019614	synj1	99	84.121	Cynoglossus_semilaevis
ENSGACG00000020575	synj1	99	80.395	ENSCVAG00000019250	synj1	99	79.898	Cyprinodon_variegatus
ENSGACG00000020575	synj1	99	78.566	ENSDARG00000025011	synj1	99	77.390	Danio_rerio
ENSGACG00000020575	synj1	92	61.586	ENSDNOG00000010732	SYNJ1	69	67.666	Dasypus_novemcinctus
ENSGACG00000020575	synj1	53	76.012	ENSDORG00000014735	-	98	76.012	Dipodomys_ordii
ENSGACG00000020575	synj1	75	76.923	ENSETEG00000018674	SYNJ1	59	76.923	Echinops_telfairi
ENSGACG00000020575	synj1	99	65.388	ENSEASG00005006287	SYNJ1	96	72.823	Equus_asinus_asinus
ENSGACG00000020575	synj1	99	65.863	ENSECAG00000004829	SYNJ1	99	62.556	Equus_caballus
ENSGACG00000020575	synj1	70	71.190	ENSEEUG00000005150	SYNJ1	57	71.190	Erinaceus_europaeus
ENSGACG00000020575	synj1	99	75.000	ENSELUG00000009731	synj1	99	70.519	Esox_lucius
ENSGACG00000020575	synj1	89	69.345	ENSFCAG00000012498	SYNJ1	84	70.936	Felis_catus
ENSGACG00000020575	synj1	73	54.352	ENSFALG00000004680	SYNJ1	62	63.824	Ficedula_albicollis
ENSGACG00000020575	synj1	94	63.643	ENSFDAG00000016818	SYNJ1	98	76.445	Fukomys_damarensis
ENSGACG00000020575	synj1	99	83.098	ENSFHEG00000017689	synj1	81	81.730	Fundulus_heteroclitus
ENSGACG00000020575	synj1	80	87.700	ENSGMOG00000014852	synj1	80	87.700	Gadus_morhua
ENSGACG00000020575	synj1	94	67.063	ENSGALG00000034317	SYNJ1	82	62.072	Gallus_gallus
ENSGACG00000020575	synj1	99	83.815	ENSGAFG00000019466	synj1	80	80.974	Gambusia_affinis
ENSGACG00000020575	synj1	95	66.693	ENSGAGG00000022523	SYNJ1	82	71.520	Gopherus_agassizii
ENSGACG00000020575	synj1	94	65.055	ENSGGOG00000015945	SYNJ1	99	62.726	Gorilla_gorilla
ENSGACG00000020575	synj1	99	83.542	ENSHBUG00000007774	synj1	99	83.869	Haplochromis_burtoni
ENSGACG00000020575	synj1	94	62.963	ENSHGLG00000006420	SYNJ1	98	76.156	Heterocephalus_glaber_female
ENSGACG00000020575	synj1	94	65.424	ENSHGLG00100012591	SYNJ1	98	76.156	Heterocephalus_glaber_male
ENSGACG00000020575	synj1	95	93.988	ENSHCOG00000012774	synj1	96	93.988	Hippocampus_comes
ENSGACG00000020575	synj1	99	79.648	ENSIPUG00000010691	SYNJ1	83	78.491	Ictalurus_punctatus
ENSGACG00000020575	synj1	94	63.997	ENSSTOG00000015806	SYNJ1	99	63.079	Ictidomys_tridecemlineatus
ENSGACG00000020575	synj1	92	59.397	ENSJJAG00000020168	Synj1	82	58.115	Jaculus_jaculus
ENSGACG00000020575	synj1	83	88.026	ENSKMAG00000004221	synj1	92	82.815	Kryptolebias_marmoratus
ENSGACG00000020575	synj1	99	84.498	ENSLBEG00000015081	synj1	99	81.913	Labrus_bergylta
ENSGACG00000020575	synj1	99	62.980	ENSLACG00000005928	SYNJ1	70	70.901	Latimeria_chalumnae
ENSGACG00000020575	synj1	94	69.354	ENSLOCG00000009230	synj1	74	76.715	Lepisosteus_oculatus
ENSGACG00000020575	synj1	81	72.165	ENSLAFG00000011806	SYNJ1	68	70.765	Loxodonta_africana
ENSGACG00000020575	synj1	91	65.029	ENSMFAG00000018883	SYNJ1	84	69.525	Macaca_fascicularis
ENSGACG00000020575	synj1	93	64.231	ENSMMUG00000004624	SYNJ1	83	71.170	Macaca_mulatta
ENSGACG00000020575	synj1	93	66.507	ENSMNEG00000040077	SYNJ1	78	71.012	Macaca_nemestrina
ENSGACG00000020575	synj1	93	66.507	ENSMLEG00000037029	SYNJ1	84	70.898	Mandrillus_leucophaeus
ENSGACG00000020575	synj1	99	86.525	ENSMAMG00000013404	synj1	80	86.576	Mastacembelus_armatus
ENSGACG00000020575	synj1	99	85.747	ENSMZEG00005024358	synj1	99	86.275	Maylandia_zebra
ENSGACG00000020575	synj1	94	64.529	ENSMGAG00000014522	SYNJ1	82	59.884	Meleagris_gallopavo
ENSGACG00000020575	synj1	89	65.437	ENSMAUG00000009743	Synj1	98	76.012	Mesocricetus_auratus
ENSGACG00000020575	synj1	94	65.187	ENSMICG00000034953	SYNJ1	99	63.102	Microcebus_murinus
ENSGACG00000020575	synj1	100	79.425	ENSMMOG00000010203	synj1	99	81.358	Mola_mola
ENSGACG00000020575	synj1	84	67.448	ENSMODG00000021073	SYNJ1	82	67.831	Monodelphis_domestica
ENSGACG00000020575	synj1	99	82.301	ENSMALG00000014015	synj1	80	82.461	Monopterus_albus
ENSGACG00000020575	synj1	94	64.324	MGP_CAROLIEiJ_G0020951	Synj1	98	76.301	Mus_caroli
ENSGACG00000020575	synj1	94	64.514	ENSMUSG00000022973	Synj1	98	76.301	Mus_musculus
ENSGACG00000020575	synj1	92	64.961	MGP_PahariEiJ_G0016656	Synj1	98	76.301	Mus_pahari
ENSGACG00000020575	synj1	94	64.590	MGP_SPRETEiJ_G0021857	Synj1	98	76.445	Mus_spretus
ENSGACG00000020575	synj1	89	66.156	ENSMPUG00000001153	SYNJ1	69	70.909	Mustela_putorius_furo
ENSGACG00000020575	synj1	58	52.547	ENSMLUG00000005764	-	55	61.630	Myotis_lucifugus
ENSGACG00000020575	synj1	51	73.235	ENSMLUG00000026584	-	100	73.235	Myotis_lucifugus
ENSGACG00000020575	synj1	95	63.361	ENSNGAG00000000453	Synj1	98	75.867	Nannospalax_galili
ENSGACG00000020575	synj1	99	78.399	ENSNBRG00000011936	synj1	94	82.337	Neolamprologus_brichardi
ENSGACG00000020575	synj1	79	62.055	ENSNLEG00000003734	SYNJ1	98	57.659	Nomascus_leucogenys
ENSGACG00000020575	synj1	68	64.366	ENSMEUG00000004158	-	60	64.366	Notamacropus_eugenii
ENSGACG00000020575	synj1	91	72.000	ENSOPRG00000013602	SYNJ1	75	72.000	Ochotona_princeps
ENSGACG00000020575	synj1	53	75.867	ENSODEG00000002409	-	98	75.867	Octodon_degus
ENSGACG00000020575	synj1	99	79.765	ENSONIG00000004667	synj1	78	89.234	Oreochromis_niloticus
ENSGACG00000020575	synj1	97	60.441	ENSOANG00000006929	SYNJ1	69	70.280	Ornithorhynchus_anatinus
ENSGACG00000020575	synj1	95	63.525	ENSOCUG00000001420	SYNJ1	83	62.594	Oryctolagus_cuniculus
ENSGACG00000020575	synj1	99	81.914	ENSORLG00000004320	synj1	99	79.764	Oryzias_latipes
ENSGACG00000020575	synj1	100	77.276	ENSORLG00020011994	synj1	98	75.713	Oryzias_latipes_hni
ENSGACG00000020575	synj1	99	82.840	ENSORLG00015018077	synj1	78	81.567	Oryzias_latipes_hsok
ENSGACG00000020575	synj1	99	80.942	ENSOMEG00000014322	synj1	99	79.617	Oryzias_melastigma
ENSGACG00000020575	synj1	94	61.480	ENSOGAG00000006010	SYNJ1	81	61.040	Otolemur_garnettii
ENSGACG00000020575	synj1	99	62.092	ENSOARG00000013414	SYNJ1	67	70.845	Ovis_aries
ENSGACG00000020575	synj1	93	65.669	ENSPPAG00000026784	SYNJ1	84	70.988	Pan_paniscus
ENSGACG00000020575	synj1	89	69.345	ENSPPRG00000023469	SYNJ1	84	70.936	Panthera_pardus
ENSGACG00000020575	synj1	89	69.428	ENSPTIG00000007930	SYNJ1	84	71.026	Panthera_tigris_altaica
ENSGACG00000020575	synj1	93	65.721	ENSPTRG00000023787	SYNJ1	99	62.726	Pan_troglodytes
ENSGACG00000020575	synj1	93	65.721	ENSPTRG00000048135	-	99	62.726	Pan_troglodytes
ENSGACG00000020575	synj1	93	66.507	ENSPANG00000022531	SYNJ1	84	70.898	Papio_anubis
ENSGACG00000020575	synj1	83	80.563	ENSPKIG00000022603	synj1	89	80.036	Paramormyrops_kingsleyae
ENSGACG00000020575	synj1	99	79.493	ENSPMGG00000016831	synj1	93	80.208	Periophthalmus_magnuspinnatus
ENSGACG00000020575	synj1	94	64.058	ENSPEMG00000018767	Synj1	98	76.301	Peromyscus_maniculatus_bairdii
ENSGACG00000020575	synj1	94	65.427	ENSPCIG00000016372	SYNJ1	82	69.636	Phascolarctos_cinereus
ENSGACG00000020575	synj1	99	82.447	ENSPFOG00000016886	synj1	99	82.344	Poecilia_formosa
ENSGACG00000020575	synj1	99	81.627	ENSPLAG00000017559	synj1	99	79.127	Poecilia_latipinna
ENSGACG00000020575	synj1	99	83.008	ENSPMEG00000007643	synj1	81	80.430	Poecilia_mexicana
ENSGACG00000020575	synj1	99	84.314	ENSPREG00000012412	synj1	99	82.436	Poecilia_reticulata
ENSGACG00000020575	synj1	89	65.675	ENSPPYG00000011365	SYNJ1	78	70.716	Pongo_abelii
ENSGACG00000020575	synj1	68	82.857	ENSPCAG00000009906	SYNJ1	55	82.857	Procavia_capensis
ENSGACG00000020575	synj1	90	75.862	ENSPCOG00000024841	SYNJ1	80	74.580	Propithecus_coquereli
ENSGACG00000020575	synj1	83	67.332	ENSPVAG00000000892	SYNJ1	82	61.865	Pteropus_vampyrus
ENSGACG00000020575	synj1	99	83.635	ENSPNYG00000022989	synj1	99	82.380	Pundamilia_nyererei
ENSGACG00000020575	synj1	83	84.153	ENSPNAG00000021119	synj1	90	83.818	Pygocentrus_nattereri
ENSGACG00000020575	synj1	94	64.688	ENSRNOG00000002051	Synj1	99	63.781	Rattus_norvegicus
ENSGACG00000020575	synj1	93	65.406	ENSRBIG00000034477	SYNJ1	84	70.807	Rhinopithecus_bieti
ENSGACG00000020575	synj1	93	64.651	ENSRROG00000039256	SYNJ1	84	70.898	Rhinopithecus_roxellana
ENSGACG00000020575	synj1	93	65.539	ENSSBOG00000021001	SYNJ1	84	70.988	Saimiri_boliviensis_boliviensis
ENSGACG00000020575	synj1	95	63.463	ENSSHAG00000008538	SYNJ1	70	69.964	Sarcophilus_harrisii
ENSGACG00000020575	synj1	99	78.507	ENSSFOG00015006095	synj1	83	76.998	Scleropages_formosus
ENSGACG00000020575	synj1	100	83.506	ENSSMAG00000018066	synj1	99	82.840	Scophthalmus_maximus
ENSGACG00000020575	synj1	99	86.511	ENSSDUG00000013058	synj1	79	86.241	Seriola_dumerili
ENSGACG00000020575	synj1	99	86.662	ENSSLDG00000021406	synj1	99	86.391	Seriola_lalandi_dorsalis
ENSGACG00000020575	synj1	95	67.032	ENSSPUG00000012552	SYNJ1	82	64.087	Sphenodon_punctatus
ENSGACG00000020575	synj1	94	85.304	ENSSPAG00000006812	SYNJ1	79	86.364	Stegastes_partitus
ENSGACG00000020575	synj1	99	84.203	ENSSPAG00000017029	synj1	99	83.236	Stegastes_partitus
ENSGACG00000020575	synj1	99	63.099	ENSSSCG00000012035	SYNJ1	99	63.963	Sus_scrofa
ENSGACG00000020575	synj1	99	62.772	ENSTGUG00000013445	SYNJ1	70	70.826	Taeniopygia_guttata
ENSGACG00000020575	synj1	99	80.395	ENSTRUG00000006907	synj1	96	80.258	Takifugu_rubripes
ENSGACG00000020575	synj1	99	74.255	ENSTNIG00000009940	synj1	83	83.303	Tetraodon_nigroviridis
ENSGACG00000020575	synj1	73	82.911	ENSTBEG00000016298	SYNJ1	60	82.911	Tupaia_belangeri
ENSGACG00000020575	synj1	93	71.632	ENSTTRG00000002222	SYNJ1	66	71.632	Tursiops_truncatus
ENSGACG00000020575	synj1	94	67.427	ENSUAMG00000018606	SYNJ1	98	73.977	Ursus_americanus
ENSGACG00000020575	synj1	94	67.349	ENSUMAG00000018419	SYNJ1	99	73.242	Ursus_maritimus
ENSGACG00000020575	synj1	70	84.286	ENSVPAG00000001241	SYNJ1	58	84.286	Vicugna_pacos
ENSGACG00000020575	synj1	94	64.450	ENSVVUG00000023125	SYNJ1	83	71.026	Vulpes_vulpes
ENSGACG00000020575	synj1	93	62.805	ENSXETG00000009899	synj1	69	69.106	Xenopus_tropicalis
ENSGACG00000020575	synj1	100	83.536	ENSXCOG00000011896	synj1	99	80.672	Xiphophorus_couchianus
ENSGACG00000020575	synj1	99	83.384	ENSXMAG00000017524	synj1	99	81.520	Xiphophorus_maculatus