EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000020621 (Gene tree)
Gene ID: -
Gene Symbol: srsf1b
Alias: ASF|MGC5228|SF2|SF2p33|SFRS1|SRp30a
Full Name: serine/arginine-rich splicing factor 1b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1683 bases
Position: chrgroupVII:21531881-21533563
Accession: ZDB-GENE-040426-1467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027276	RRM_1	PF00076.22	1.8e-31	1	2
ENSGACP00000027276	RRM_1	PF00076.22	1.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027328	-	714	-	ENSGACP00000027276	237 (aa)	-	G3QBL0

Gene Model

Click here to download ENSGACG00000020621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020621	srsf1b	78	38.889	ENSGACG00000002389	srsf4	61	37.681
ENSGACG00000020621	srsf1b	64	33.333	ENSGACG00000007834	srsf5b	84	43.478
ENSGACG00000020621	srsf1b	73	85.955	ENSGACG00000011094	-	96	86.517
ENSGACG00000020621	srsf1b	74	65.625	ENSGACG00000016921	srsf9	73	67.553
ENSGACG00000020621	srsf1b	66	39.766	ENSGACG00000011761	srsf5a	65	42.690
ENSGACG00000020621	srsf1b	65	42.771	ENSGACG00000006084	srsf6a	66	35.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020621	srsf1b	100	74.390	ENSG00000136450	SRSF1	100	90.769	Homo_sapiens
ENSGACG00000020621	srsf1b	80	92.593	ENSAPOG00000008542	-	80	92.593	Acanthochromis_polyacanthus
ENSGACG00000020621	srsf1b	78	86.387	ENSAPOG00000002748	-	78	86.911	Acanthochromis_polyacanthus
ENSGACG00000020621	srsf1b	80	85.789	ENSAMEG00000002635	SRSF1	79	88.421	Ailuropoda_melanoleuca
ENSGACG00000020621	srsf1b	78	86.316	ENSACIG00000008091	srsf1a	83	86.842	Amphilophus_citrinellus
ENSGACG00000020621	srsf1b	78	85.864	ENSAOCG00000010671	-	83	86.387	Amphiprion_ocellaris
ENSGACG00000020621	srsf1b	80	85.714	ENSAOCG00000000337	-	82	86.700	Amphiprion_ocellaris
ENSGACG00000020621	srsf1b	78	85.864	ENSAPEG00000009915	-	83	86.387	Amphiprion_percula
ENSGACG00000020621	srsf1b	80	85.714	ENSAPEG00000023352	-	81	86.700	Amphiprion_percula
ENSGACG00000020621	srsf1b	78	85.864	ENSATEG00000022403	-	77	86.387	Anabas_testudineus
ENSGACG00000020621	srsf1b	82	85.500	ENSATEG00000021567	-	81	89.175	Anabas_testudineus
ENSGACG00000020621	srsf1b	80	84.264	ENSACAG00000005542	-	79	86.294	Anolis_carolinensis
ENSGACG00000020621	srsf1b	81	66.667	ENSANAG00000025417	-	75	67.196	Aotus_nancymaae
ENSGACG00000020621	srsf1b	100	74.390	ENSANAG00000020583	-	99	88.889	Aotus_nancymaae
ENSGACG00000020621	srsf1b	78	82.412	ENSAMXG00000035996	srsf1a	79	84.422	Astyanax_mexicanus
ENSGACG00000020621	srsf1b	53	69.677	ENSAMXG00000024373	-	72	72.258	Astyanax_mexicanus
ENSGACG00000020621	srsf1b	100	74.390	ENSBTAG00000014766	SRSF1	79	86.802	Bos_taurus
ENSGACG00000020621	srsf1b	100	74.390	ENSCJAG00000041713	-	99	88.889	Callithrix_jacchus
ENSGACG00000020621	srsf1b	79	78.571	ENSCJAG00000008111	-	88	79.798	Callithrix_jacchus
ENSGACG00000020621	srsf1b	100	74.390	ENSCAFG00000017430	SRSF1	78	86.802	Canis_familiaris
ENSGACG00000020621	srsf1b	100	74.390	ENSCAFG00020025632	-	78	86.802	Canis_lupus_dingo
ENSGACG00000020621	srsf1b	80	84.772	ENSCHIG00000010787	SRSF1	79	86.802	Capra_hircus
ENSGACG00000020621	srsf1b	100	74.390	ENSTSYG00000013899	-	99	88.889	Carlito_syrichta
ENSGACG00000020621	srsf1b	100	74.390	ENSCPOG00000032681	-	79	86.802	Cavia_porcellus
ENSGACG00000020621	srsf1b	100	74.390	ENSCCAG00000029484	-	99	88.889	Cebus_capucinus
ENSGACG00000020621	srsf1b	100	74.390	ENSCATG00000042294	-	99	88.889	Cercocebus_atys
ENSGACG00000020621	srsf1b	100	74.390	ENSCLAG00000014707	-	79	86.802	Chinchilla_lanigera
ENSGACG00000020621	srsf1b	100	73.577	ENSCSAG00000005642	-	78	85.787	Chlorocebus_sabaeus
ENSGACG00000020621	srsf1b	80	84.772	ENSCHOG00000001899	SRSF1	79	86.802	Choloepus_hoffmanni
ENSGACG00000020621	srsf1b	100	74.390	ENSCPBG00000009851	-	79	86.802	Chrysemys_picta_bellii
ENSGACG00000020621	srsf1b	100	74.390	ENSCANG00000029726	-	99	88.889	Colobus_angolensis_palliatus
ENSGACG00000020621	srsf1b	100	74.390	ENSCGRG00001000670	Srsf1	78	86.802	Cricetulus_griseus_chok1gshd
ENSGACG00000020621	srsf1b	100	74.390	ENSCGRG00000005590	Srsf1	79	86.802	Cricetulus_griseus_crigri
ENSGACG00000020621	srsf1b	78	88.108	ENSCSEG00000014272	-	81	88.108	Cynoglossus_semilaevis
ENSGACG00000020621	srsf1b	79	80.189	ENSCSEG00000009973	-	81	80.660	Cynoglossus_semilaevis
ENSGACG00000020621	srsf1b	78	84.615	ENSCVAG00000005458	-	97	82.051	Cyprinodon_variegatus
ENSGACG00000020621	srsf1b	78	85.864	ENSCVAG00000018617	-	78	86.387	Cyprinodon_variegatus
ENSGACG00000020621	srsf1b	78	85.567	ENSDARG00000017843	srsf1b	79	87.113	Danio_rerio
ENSGACG00000020621	srsf1b	78	80.882	ENSDARG00000057691	srsf1a	99	82.199	Danio_rerio
ENSGACG00000020621	srsf1b	100	74.390	ENSDNOG00000011737	-	78	86.802	Dasypus_novemcinctus
ENSGACG00000020621	srsf1b	100	74.390	ENSDORG00000015082	Srsf1	79	86.802	Dipodomys_ordii
ENSGACG00000020621	srsf1b	74	84.239	ENSETEG00000005349	-	63	85.326	Echinops_telfairi
ENSGACG00000020621	srsf1b	100	74.390	ENSEASG00005002922	-	78	86.802	Equus_asinus_asinus
ENSGACG00000020621	srsf1b	80	84.772	ENSECAG00000016654	SRSF1	79	86.802	Equus_caballus
ENSGACG00000020621	srsf1b	74	85.326	ENSEEUG00000009255	-	63	86.413	Erinaceus_europaeus
ENSGACG00000020621	srsf1b	78	86.010	ENSELUG00000021646	srsf1a	77	86.010	Esox_lucius
ENSGACG00000020621	srsf1b	100	74.390	ENSFCAG00000002250	-	92	86.413	Felis_catus
ENSGACG00000020621	srsf1b	80	91.228	ENSFALG00000005062	-	78	70.854	Ficedula_albicollis
ENSGACG00000020621	srsf1b	100	74.390	ENSFDAG00000010646	-	79	86.802	Fukomys_damarensis
ENSGACG00000020621	srsf1b	78	85.864	ENSFHEG00000003174	srsf1a	83	86.387	Fundulus_heteroclitus
ENSGACG00000020621	srsf1b	80	90.526	ENSGMOG00000014787	-	80	90.270	Gadus_morhua
ENSGACG00000020621	srsf1b	80	84.772	ENSGALG00000005525	SRSF1	79	86.802	Gallus_gallus
ENSGACG00000020621	srsf1b	100	74.390	ENSGAGG00000022965	-	78	86.802	Gopherus_agassizii
ENSGACG00000020621	srsf1b	100	74.390	ENSGGOG00000004386	SRSF1	99	88.889	Gorilla_gorilla
ENSGACG00000020621	srsf1b	78	86.316	ENSHBUG00000016788	srsf1a	80	86.842	Haplochromis_burtoni
ENSGACG00000020621	srsf1b	66	84.146	ENSHGLG00000000669	-	76	86.585	Heterocephalus_glaber_female
ENSGACG00000020621	srsf1b	66	84.146	ENSHGLG00000000600	-	76	86.585	Heterocephalus_glaber_female
ENSGACG00000020621	srsf1b	100	74.390	ENSHGLG00100016906	-	79	86.802	Heterocephalus_glaber_male
ENSGACG00000020621	srsf1b	78	80.203	ENSHCOG00000018918	srsf1a	77	82.741	Hippocampus_comes
ENSGACG00000020621	srsf1b	80	85.714	ENSIPUG00000008750	srsf1b	80	87.245	Ictalurus_punctatus
ENSGACG00000020621	srsf1b	78	82.412	ENSIPUG00000017039	srsf1a	79	84.422	Ictalurus_punctatus
ENSGACG00000020621	srsf1b	100	74.390	ENSSTOG00000000243	-	92	86.413	Ictidomys_tridecemlineatus
ENSGACG00000020621	srsf1b	100	74.390	ENSJJAG00000000102	-	79	86.802	Jaculus_jaculus
ENSGACG00000020621	srsf1b	50	78.571	ENSJJAG00000014464	-	95	80.952	Jaculus_jaculus
ENSGACG00000020621	srsf1b	78	85.417	ENSKMAG00000019232	srsf1a	78	85.938	Kryptolebias_marmoratus
ENSGACG00000020621	srsf1b	78	85.340	ENSLBEG00000020864	-	83	85.864	Labrus_bergylta
ENSGACG00000020621	srsf1b	80	82.500	ENSLBEG00000015294	-	80	84.500	Labrus_bergylta
ENSGACG00000020621	srsf1b	78	85.492	ENSLACG00000014160	srsf1a	73	86.528	Latimeria_chalumnae
ENSGACG00000020621	srsf1b	80	85.204	ENSLOCG00000005994	srsf1a	79	87.245	Lepisosteus_oculatus
ENSGACG00000020621	srsf1b	80	87.302	ENSLAFG00000025743	SRSF1	79	86.802	Loxodonta_africana
ENSGACG00000020621	srsf1b	100	74.390	ENSMFAG00000040003	-	99	88.889	Macaca_fascicularis
ENSGACG00000020621	srsf1b	100	74.390	ENSMMUG00000004725	SRSF1	99	88.889	Macaca_mulatta
ENSGACG00000020621	srsf1b	100	71.951	ENSMMUG00000003260	-	95	84.184	Macaca_mulatta
ENSGACG00000020621	srsf1b	100	71.545	ENSMNEG00000015983	-	78	83.756	Macaca_nemestrina
ENSGACG00000020621	srsf1b	100	74.390	ENSMNEG00000027680	-	99	88.889	Macaca_nemestrina
ENSGACG00000020621	srsf1b	80	84.772	ENSMLEG00000040509	SRSF1	79	86.802	Mandrillus_leucophaeus
ENSGACG00000020621	srsf1b	100	73.444	ENSMLEG00000015243	-	77	85.938	Mandrillus_leucophaeus
ENSGACG00000020621	srsf1b	80	87.245	ENSMAMG00000019691	-	81	87.755	Mastacembelus_armatus
ENSGACG00000020621	srsf1b	78	85.864	ENSMAMG00000018454	-	78	86.387	Mastacembelus_armatus
ENSGACG00000020621	srsf1b	80	88.482	ENSMAMG00000019687	-	80	91.099	Mastacembelus_armatus
ENSGACG00000020621	srsf1b	100	74.390	ENSMAUG00000021845	Srsf1	79	86.802	Mesocricetus_auratus
ENSGACG00000020621	srsf1b	100	74.390	ENSMICG00000013639	-	99	88.889	Microcebus_murinus
ENSGACG00000020621	srsf1b	100	74.390	ENSMOCG00000001996	Srsf1	79	86.802	Microtus_ochrogaster
ENSGACG00000020621	srsf1b	78	84.103	ENSMMOG00000014354	srsf1a	83	85.864	Mola_mola
ENSGACG00000020621	srsf1b	74	85.405	ENSMODG00000014781	-	63	86.486	Monodelphis_domestica
ENSGACG00000020621	srsf1b	82	80.000	ENSMALG00000007763	-	79	83.598	Monopterus_albus
ENSGACG00000020621	srsf1b	78	85.864	ENSMALG00000017129	-	75	86.387	Monopterus_albus
ENSGACG00000020621	srsf1b	100	74.390	MGP_CAROLIEiJ_G0016943	Srsf1	92	86.413	Mus_caroli
ENSGACG00000020621	srsf1b	100	74.390	ENSMUSG00000018379	Srsf1	92	86.413	Mus_musculus
ENSGACG00000020621	srsf1b	100	74.390	MGP_PahariEiJ_G0018074	Srsf1	81	88.235	Mus_pahari
ENSGACG00000020621	srsf1b	100	74.390	MGP_SPRETEiJ_G0017790	Srsf1	92	86.413	Mus_spretus
ENSGACG00000020621	srsf1b	80	84.772	ENSMPUG00000015369	SRSF1	79	86.802	Mustela_putorius_furo
ENSGACG00000020621	srsf1b	82	81.726	ENSMLUG00000023995	-	79	83.770	Myotis_lucifugus
ENSGACG00000020621	srsf1b	80	84.772	ENSMLUG00000011040	SRSF1	79	86.802	Myotis_lucifugus
ENSGACG00000020621	srsf1b	80	84.772	ENSNGAG00000011395	Srsf1	79	86.802	Nannospalax_galili
ENSGACG00000020621	srsf1b	100	76.763	ENSNBRG00000008041	srsf1b	80	80.952	Neolamprologus_brichardi
ENSGACG00000020621	srsf1b	100	74.390	ENSNLEG00000008088	-	99	88.889	Nomascus_leucogenys
ENSGACG00000020621	srsf1b	50	81.102	ENSMEUG00000002783	-	100	82.677	Notamacropus_eugenii
ENSGACG00000020621	srsf1b	52	81.818	ENSOPRG00000001234	-	72	84.848	Ochotona_princeps
ENSGACG00000020621	srsf1b	99	74.286	ENSODEG00000011481	-	79	86.294	Octodon_degus
ENSGACG00000020621	srsf1b	96	77.021	ENSONIG00000004860	-	81	87.245	Oreochromis_niloticus
ENSGACG00000020621	srsf1b	78	86.316	ENSONIG00000013160	-	77	86.842	Oreochromis_niloticus
ENSGACG00000020621	srsf1b	97	64.634	ENSOCUG00000010894	-	77	70.833	Oryctolagus_cuniculus
ENSGACG00000020621	srsf1b	78	85.864	ENSORLG00000004580	srsf1a	78	86.387	Oryzias_latipes
ENSGACG00000020621	srsf1b	78	85.864	ENSORLG00020009456	srsf1a	83	86.387	Oryzias_latipes_hni
ENSGACG00000020621	srsf1b	78	85.864	ENSORLG00015014384	srsf1a	83	86.387	Oryzias_latipes_hsok
ENSGACG00000020621	srsf1b	71	83.333	ENSOMEG00000004106	srsf1a	71	83.908	Oryzias_melastigma
ENSGACG00000020621	srsf1b	84	85.577	ENSOGAG00000025950	-	79	86.802	Otolemur_garnettii
ENSGACG00000020621	srsf1b	80	87.831	ENSOARG00000008323	SRSF1	78	88.360	Ovis_aries
ENSGACG00000020621	srsf1b	100	74.390	ENSPPAG00000043403	-	99	88.889	Pan_paniscus
ENSGACG00000020621	srsf1b	100	74.390	ENSPPRG00000004238	-	92	86.413	Panthera_pardus
ENSGACG00000020621	srsf1b	100	74.390	ENSPTRG00000049077	SRSF1	99	88.889	Pan_troglodytes
ENSGACG00000020621	srsf1b	100	60.338	ENSPANG00000030275	-	75	67.553	Papio_anubis
ENSGACG00000020621	srsf1b	100	74.390	ENSPANG00000022305	-	99	88.889	Papio_anubis
ENSGACG00000020621	srsf1b	80	86.224	ENSPKIG00000012857	srsf1b	80	87.245	Paramormyrops_kingsleyae
ENSGACG00000020621	srsf1b	78	85.417	ENSPKIG00000007204	srsf1a	83	86.458	Paramormyrops_kingsleyae
ENSGACG00000020621	srsf1b	80	77.889	ENSPSIG00000009000	-	80	79.899	Pelodiscus_sinensis
ENSGACG00000020621	srsf1b	78	87.568	ENSPMGG00000013112	-	82	87.568	Periophthalmus_magnuspinnatus
ENSGACG00000020621	srsf1b	97	83.691	ENSPMGG00000005467	-	78	90.374	Periophthalmus_magnuspinnatus
ENSGACG00000020621	srsf1b	100	74.390	ENSPEMG00000021416	Srsf1	79	86.802	Peromyscus_maniculatus_bairdii
ENSGACG00000020621	srsf1b	80	84.848	ENSPCIG00000006076	-	80	86.869	Phascolarctos_cinereus
ENSGACG00000020621	srsf1b	80	84.848	ENSPFOG00000018325	-	70	86.082	Poecilia_formosa
ENSGACG00000020621	srsf1b	80	84.848	ENSPLAG00000008416	srsf1b	79	86.082	Poecilia_latipinna
ENSGACG00000020621	srsf1b	80	84.848	ENSPMEG00000002388	-	79	86.082	Poecilia_mexicana
ENSGACG00000020621	srsf1b	78	85.864	ENSPREG00000009667	srsf1a	78	86.387	Poecilia_reticulata
ENSGACG00000020621	srsf1b	100	74.390	ENSPPYG00000008240	SRSF1	79	86.802	Pongo_abelii
ENSGACG00000020621	srsf1b	80	84.772	ENSPCAG00000005199	SRSF1	79	86.802	Procavia_capensis
ENSGACG00000020621	srsf1b	100	74.390	ENSPCOG00000023654	-	99	88.889	Propithecus_coquereli
ENSGACG00000020621	srsf1b	81	69.458	ENSPCOG00000025736	-	95	68.844	Propithecus_coquereli
ENSGACG00000020621	srsf1b	57	94.286	ENSPVAG00000000519	-	54	94.286	Pteropus_vampyrus
ENSGACG00000020621	srsf1b	78	86.911	ENSPNAG00000022241	srsf1a	78	87.435	Pygocentrus_nattereri
ENSGACG00000020621	srsf1b	80	86.979	ENSPNAG00000014601	srsf1b	80	88.542	Pygocentrus_nattereri
ENSGACG00000020621	srsf1b	80	84.772	ENSRNOG00000050323	Srsf1	79	86.802	Rattus_norvegicus
ENSGACG00000020621	srsf1b	100	74.390	ENSRBIG00000034445	-	99	88.889	Rhinopithecus_bieti
ENSGACG00000020621	srsf1b	100	74.390	ENSRROG00000041506	-	99	88.889	Rhinopithecus_roxellana
ENSGACG00000020621	srsf1b	100	74.390	ENSSBOG00000025377	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSGACG00000020621	srsf1b	80	84.848	ENSSHAG00000002552	-	80	86.869	Sarcophilus_harrisii
ENSGACG00000020621	srsf1b	79	87.113	ENSSFOG00015004800	srsf1a	79	87.629	Scleropages_formosus
ENSGACG00000020621	srsf1b	80	86.765	ENSSMAG00000009719	-	80	86.765	Scophthalmus_maximus
ENSGACG00000020621	srsf1b	78	85.340	ENSSMAG00000007018	-	78	85.864	Scophthalmus_maximus
ENSGACG00000020621	srsf1b	78	85.340	ENSSDUG00000011303	-	83	85.864	Seriola_dumerili
ENSGACG00000020621	srsf1b	100	70.161	ENSSDUG00000003929	-	84	77.500	Seriola_dumerili
ENSGACG00000020621	srsf1b	80	82.105	ENSSLDG00000016868	-	78	83.684	Seriola_lalandi_dorsalis
ENSGACG00000020621	srsf1b	78	85.340	ENSSLDG00000010543	-	78	85.864	Seriola_lalandi_dorsalis
ENSGACG00000020621	srsf1b	75	80.645	ENSSLDG00000016895	-	78	82.258	Seriola_lalandi_dorsalis
ENSGACG00000020621	srsf1b	74	85.326	ENSSARG00000010949	-	63	86.413	Sorex_araneus
ENSGACG00000020621	srsf1b	100	74.390	ENSSPUG00000000804	-	96	84.211	Sphenodon_punctatus
ENSGACG00000020621	srsf1b	78	85.417	ENSSPAG00000022562	-	78	86.458	Stegastes_partitus
ENSGACG00000020621	srsf1b	80	83.732	ENSSPAG00000014152	-	81	83.732	Stegastes_partitus
ENSGACG00000020621	srsf1b	100	74.390	ENSSSCG00000017626	-	79	86.802	Sus_scrofa
ENSGACG00000020621	srsf1b	53	81.955	ENSTGUG00000008416	-	72	84.962	Taeniopygia_guttata
ENSGACG00000020621	srsf1b	78	86.387	ENSTRUG00000003691	srsf1a	78	86.911	Takifugu_rubripes
ENSGACG00000020621	srsf1b	78	86.387	ENSTNIG00000016223	srsf1a	77	86.911	Tetraodon_nigroviridis
ENSGACG00000020621	srsf1b	74	82.609	ENSTBEG00000015378	-	63	84.783	Tupaia_belangeri
ENSGACG00000020621	srsf1b	52	81.818	ENSTTRG00000007310	SRSF1	72	84.848	Tursiops_truncatus
ENSGACG00000020621	srsf1b	80	84.772	ENSUAMG00000009858	SRSF1	79	86.802	Ursus_americanus
ENSGACG00000020621	srsf1b	100	74.390	ENSUMAG00000000455	-	78	86.802	Ursus_maritimus
ENSGACG00000020621	srsf1b	80	84.264	ENSVPAG00000010094	SRSF1	79	86.294	Vicugna_pacos
ENSGACG00000020621	srsf1b	100	74.390	ENSVVUG00000011882	-	78	86.802	Vulpes_vulpes
ENSGACG00000020621	srsf1b	80	86.387	ENSXETG00000008954	srsf1	81	79.167	Xenopus_tropicalis
ENSGACG00000020621	srsf1b	78	85.864	ENSXMAG00000011766	srsf1a	78	86.387	Xiphophorus_maculatus