EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000020810 (Gene tree)
Gene ID: -
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein homolog (yeast)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2545 bases
Position: chrgroupVII:25536093-25538637
Accession: ZDB-GENE-040718-267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027512	Nop16	PF09420.10	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027564	-	492	-	ENSGACP00000027512	164 (aa)	-	G3QC96

Gene Model

Click here to download ENSGACG00000020810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020810	nop16	100	77.586	ENSGACG00000003122	-	98	77.586
ENSGACG00000020810	nop16	100	84.118	ENSGACG00000002618	-	98	84.118
ENSGACG00000020810	nop16	100	87.195	ENSGACG00000020819	-	98	87.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020810	nop16	100	61.538	ENSAPOG00000010682	-	96	61.538	Acanthochromis_polyacanthus
ENSGACG00000020810	nop16	100	48.824	ENSAMEG00000006988	-	96	48.824	Ailuropoda_melanoleuca
ENSGACG00000020810	nop16	100	59.880	ENSACIG00000019263	nop16	95	59.880	Amphilophus_citrinellus
ENSGACG00000020810	nop16	100	61.988	ENSAOCG00000005504	nop16	96	61.988	Amphiprion_ocellaris
ENSGACG00000020810	nop16	100	61.988	ENSAPEG00000006605	nop16	96	61.988	Amphiprion_percula
ENSGACG00000020810	nop16	100	66.082	ENSATEG00000014089	nop16	95	66.082	Anabas_testudineus
ENSGACG00000020810	nop16	100	52.326	ENSACAG00000006333	-	96	52.326	Anolis_carolinensis
ENSGACG00000020810	nop16	100	46.707	ENSANAG00000015743	-	94	46.707	Aotus_nancymaae
ENSGACG00000020810	nop16	100	41.916	ENSANAG00000027410	-	94	41.916	Aotus_nancymaae
ENSGACG00000020810	nop16	100	60.479	ENSACLG00000025227	nop16	95	60.479	Astatotilapia_calliptera
ENSGACG00000020810	nop16	98	46.386	ENSAMXG00000006843	nop16	90	46.452	Astyanax_mexicanus
ENSGACG00000020810	nop16	100	48.824	ENSBTAG00000010734	NOP16	96	48.824	Bos_taurus
ENSGACG00000020810	nop16	100	47.647	ENSCAFG00000016694	NOP16	96	47.647	Canis_familiaris
ENSGACG00000020810	nop16	100	47.647	ENSCAFG00020011505	-	90	47.647	Canis_lupus_dingo
ENSGACG00000020810	nop16	100	48.824	ENSCHIG00000022082	-	96	48.824	Capra_hircus
ENSGACG00000020810	nop16	100	48.824	ENSTSYG00000030409	-	96	48.824	Carlito_syrichta
ENSGACG00000020810	nop16	100	42.941	ENSTSYG00000032690	-	95	42.941	Carlito_syrichta
ENSGACG00000020810	nop16	100	47.647	ENSCPOG00000026072	-	96	47.647	Cavia_porcellus
ENSGACG00000020810	nop16	96	46.914	ENSCCAG00000026775	-	93	46.914	Cebus_capucinus
ENSGACG00000020810	nop16	100	47.059	ENSCLAG00000015405	-	96	47.059	Chinchilla_lanigera
ENSGACG00000020810	nop16	100	48.824	ENSCSAG00000009400	-	96	48.824	Chlorocebus_sabaeus
ENSGACG00000020810	nop16	98	49.091	ENSCPBG00000022647	-	92	49.091	Chrysemys_picta_bellii
ENSGACG00000020810	nop16	94	36.196	ENSCING00000006179	-	81	35.099	Ciona_intestinalis
ENSGACG00000020810	nop16	94	38.217	ENSCSAVG00000000269	-	78	37.143	Ciona_savignyi
ENSGACG00000020810	nop16	100	48.824	ENSCGRG00001004259	Nop16	96	48.824	Cricetulus_griseus_chok1gshd
ENSGACG00000020810	nop16	100	48.824	ENSCGRG00000010975	Nop16	96	48.824	Cricetulus_griseus_crigri
ENSGACG00000020810	nop16	100	55.090	ENSCSEG00000020523	nop16	90	54.839	Cynoglossus_semilaevis
ENSGACG00000020810	nop16	100	60.479	ENSCVAG00000020140	nop16	95	60.479	Cyprinodon_variegatus
ENSGACG00000020810	nop16	100	48.810	ENSDARG00000044402	nop16	89	48.077	Danio_rerio
ENSGACG00000020810	nop16	100	49.112	ENSDNOG00000042890	-	95	49.112	Dasypus_novemcinctus
ENSGACG00000020810	nop16	100	48.235	ENSDORG00000008872	Nop16	96	48.235	Dipodomys_ordii
ENSGACG00000020810	nop16	93	37.267	ENSEBUG00000011196	nop16	82	36.242	Eptatretus_burgeri
ENSGACG00000020810	nop16	100	48.235	ENSEASG00005011988	-	96	48.235	Equus_asinus_asinus
ENSGACG00000020810	nop16	100	48.824	ENSECAG00000021354	NOP16	96	48.824	Equus_caballus
ENSGACG00000020810	nop16	100	53.801	ENSELUG00000000401	nop16	90	53.459	Esox_lucius
ENSGACG00000020810	nop16	100	49.412	ENSFCAG00000025473	-	96	49.412	Felis_catus
ENSGACG00000020810	nop16	98	46.061	ENSFALG00000008553	-	92	46.061	Ficedula_albicollis
ENSGACG00000020810	nop16	100	46.471	ENSFDAG00000000193	-	96	46.471	Fukomys_damarensis
ENSGACG00000020810	nop16	100	61.988	ENSFHEG00000016452	nop16	95	61.988	Fundulus_heteroclitus
ENSGACG00000020810	nop16	99	47.305	ENSGALG00000003355	-	93	47.305	Gallus_gallus
ENSGACG00000020810	nop16	86	56.757	ENSGAFG00000011616	nop16	79	56.757	Gambusia_affinis
ENSGACG00000020810	nop16	100	59.281	ENSHBUG00000013527	nop16	95	59.281	Haplochromis_burtoni
ENSGACG00000020810	nop16	100	47.647	ENSHGLG00000013437	NOP16	96	47.647	Heterocephalus_glaber_female
ENSGACG00000020810	nop16	100	47.647	ENSHGLG00100011375	NOP16	96	47.647	Heterocephalus_glaber_male
ENSGACG00000020810	nop16	100	59.064	ENSHCOG00000019999	nop16	90	60.377	Hippocampus_comes
ENSGACG00000020810	nop16	98	50.000	ENSIPUG00000006682	nop16	89	49.677	Ictalurus_punctatus
ENSGACG00000020810	nop16	100	47.674	ENSSTOG00000004869	-	96	47.674	Ictidomys_tridecemlineatus
ENSGACG00000020810	nop16	100	48.824	ENSJJAG00000017655	Nop16	96	48.824	Jaculus_jaculus
ENSGACG00000020810	nop16	100	61.538	ENSKMAG00000006164	nop16	95	61.538	Kryptolebias_marmoratus
ENSGACG00000020810	nop16	100	66.864	ENSLBEG00000018355	nop16	78	66.864	Labrus_bergylta
ENSGACG00000020810	nop16	100	53.529	ENSLACG00000014884	nop16	96	53.529	Latimeria_chalumnae
ENSGACG00000020810	nop16	100	58.235	ENSLOCG00000012348	nop16	94	58.235	Lepisosteus_oculatus
ENSGACG00000020810	nop16	100	48.521	ENSLAFG00000017886	-	95	48.521	Loxodonta_africana
ENSGACG00000020810	nop16	100	63.905	ENSMAMG00000021868	nop16	95	63.905	Mastacembelus_armatus
ENSGACG00000020810	nop16	100	60.479	ENSMZEG00005012112	nop16	95	60.479	Maylandia_zebra
ENSGACG00000020810	nop16	91	45.752	ENSMAUG00000015569	-	89	45.695	Mesocricetus_auratus
ENSGACG00000020810	nop16	50	46.341	ENSMAUG00000009138	-	93	46.341	Mesocricetus_auratus
ENSGACG00000020810	nop16	100	48.235	ENSMOCG00000020788	Nop16	96	48.235	Microtus_ochrogaster
ENSGACG00000020810	nop16	100	64.327	ENSMMOG00000016054	nop16	99	64.327	Mola_mola
ENSGACG00000020810	nop16	100	47.159	ENSMODG00000005214	-	96	47.159	Monodelphis_domestica
ENSGACG00000020810	nop16	100	66.864	ENSMALG00000021263	nop16	95	66.864	Monopterus_albus
ENSGACG00000020810	nop16	100	48.235	MGP_CAROLIEiJ_G0018538	Nop16	96	48.235	Mus_caroli
ENSGACG00000020810	nop16	100	48.824	ENSMUSG00000025869	Nop16	96	48.824	Mus_musculus
ENSGACG00000020810	nop16	100	49.412	MGP_PahariEiJ_G0019603	Nop16	96	49.412	Mus_pahari
ENSGACG00000020810	nop16	100	48.824	MGP_SPRETEiJ_G0019418	Nop16	96	48.824	Mus_spretus
ENSGACG00000020810	nop16	100	48.235	ENSMPUG00000012552	-	96	48.235	Mustela_putorius_furo
ENSGACG00000020810	nop16	100	47.059	ENSMPUG00000016964	-	89	46.835	Mustela_putorius_furo
ENSGACG00000020810	nop16	100	47.929	ENSMLUG00000003504	-	95	47.929	Myotis_lucifugus
ENSGACG00000020810	nop16	100	48.824	ENSNGAG00000018045	Nop16	96	48.824	Nannospalax_galili
ENSGACG00000020810	nop16	100	59.281	ENSNBRG00000015181	nop16	96	59.281	Neolamprologus_brichardi
ENSGACG00000020810	nop16	100	47.059	ENSODEG00000009586	-	96	47.059	Octodon_degus
ENSGACG00000020810	nop16	100	60.479	ENSONIG00000016417	nop16	95	60.479	Oreochromis_niloticus
ENSGACG00000020810	nop16	100	48.235	ENSOCUG00000013171	-	96	48.235	Oryctolagus_cuniculus
ENSGACG00000020810	nop16	100	58.084	ENSORLG00000026611	nop16	95	58.084	Oryzias_latipes
ENSGACG00000020810	nop16	100	61.078	ENSOMEG00000023001	nop16	95	61.078	Oryzias_melastigma
ENSGACG00000020810	nop16	100	48.235	ENSOGAG00000000824	-	96	48.235	Otolemur_garnettii
ENSGACG00000020810	nop16	100	48.824	ENSOARG00000002165	-	96	48.824	Ovis_aries
ENSGACG00000020810	nop16	100	48.235	ENSPPAG00000035473	-	96	48.235	Pan_paniscus
ENSGACG00000020810	nop16	100	49.412	ENSPPRG00000016600	-	96	49.412	Panthera_pardus
ENSGACG00000020810	nop16	100	49.412	ENSPTIG00000011708	-	96	49.412	Panthera_tigris_altaica
ENSGACG00000020810	nop16	100	48.235	ENSPTRG00000017560	NOP16	96	48.235	Pan_troglodytes
ENSGACG00000020810	nop16	100	52.047	ENSPKIG00000009587	nop16	95	52.047	Paramormyrops_kingsleyae
ENSGACG00000020810	nop16	76	51.938	ENSPSIG00000013546	-	90	51.938	Pelodiscus_sinensis
ENSGACG00000020810	nop16	98	63.855	ENSPMGG00000003443	nop16	96	63.855	Periophthalmus_magnuspinnatus
ENSGACG00000020810	nop16	100	49.412	ENSPEMG00000020268	Nop16	96	49.412	Peromyscus_maniculatus_bairdii
ENSGACG00000020810	nop16	100	46.328	ENSPCIG00000009782	-	96	46.328	Phascolarctos_cinereus
ENSGACG00000020810	nop16	100	62.573	ENSPFOG00000010549	nop16	95	62.573	Poecilia_formosa
ENSGACG00000020810	nop16	80	61.194	ENSPLAG00000007124	nop16	70	61.194	Poecilia_latipinna
ENSGACG00000020810	nop16	100	62.573	ENSPMEG00000008611	nop16	95	62.573	Poecilia_mexicana
ENSGACG00000020810	nop16	100	61.988	ENSPREG00000012940	nop16	95	61.988	Poecilia_reticulata
ENSGACG00000020810	nop16	100	48.235	ENSPPYG00000016070	-	96	48.235	Pongo_abelii
ENSGACG00000020810	nop16	100	59.880	ENSPNYG00000013529	nop16	95	59.880	Pundamilia_nyererei
ENSGACG00000020810	nop16	98	48.171	ENSPNAG00000016233	nop16	91	48.387	Pygocentrus_nattereri
ENSGACG00000020810	nop16	100	47.647	ENSRNOG00000017284	Nop16	96	47.647	Rattus_norvegicus
ENSGACG00000020810	nop16	100	46.784	ENSSHAG00000001724	-	96	46.784	Sarcophilus_harrisii
ENSGACG00000020810	nop16	93	53.165	ENSSFOG00015010537	nop16	71	53.503	Scleropages_formosus
ENSGACG00000020810	nop16	100	65.680	ENSSDUG00000022349	nop16	95	65.680	Seriola_dumerili
ENSGACG00000020810	nop16	100	64.912	ENSSLDG00000025171	nop16	95	64.912	Seriola_lalandi_dorsalis
ENSGACG00000020810	nop16	77	36.364	ENSSARG00000006699	-	61	36.364	Sorex_araneus
ENSGACG00000020810	nop16	100	51.765	ENSSPUG00000006508	-	95	51.765	Sphenodon_punctatus
ENSGACG00000020810	nop16	100	64.118	ENSSPAG00000011772	nop16	95	64.118	Stegastes_partitus
ENSGACG00000020810	nop16	100	48.824	ENSSSCG00000029577	-	96	48.824	Sus_scrofa
ENSGACG00000020810	nop16	98	46.667	ENSTGUG00000000543	-	92	46.667	Taeniopygia_guttata
ENSGACG00000020810	nop16	98	61.111	ENSTRUG00000020255	nop16	92	61.111	Takifugu_rubripes
ENSGACG00000020810	nop16	100	63.314	ENSTNIG00000007616	nop16	95	63.314	Tetraodon_nigroviridis
ENSGACG00000020810	nop16	100	48.824	ENSUAMG00000005139	-	96	48.824	Ursus_americanus
ENSGACG00000020810	nop16	100	47.647	ENSVVUG00000001697	-	90	47.647	Vulpes_vulpes
ENSGACG00000020810	nop16	90	43.791	ENSXETG00000022342	nop16	88	43.791	Xenopus_tropicalis
ENSGACG00000020810	nop16	100	62.573	ENSXCOG00000018829	nop16	97	62.573	Xiphophorus_couchianus
ENSGACG00000020810	nop16	100	62.573	ENSXMAG00000029113	nop16	95	62.573	Xiphophorus_maculatus