EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000020819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3629 bases
Position: chrgroupVII:25933674-25937302
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027525	Nop16	PF09420.10	4.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027577	-	1184	-	ENSGACP00000027525	165 (aa)	-	G3QCA9

Gene Model

Click here to download ENSGACG00000020819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000020819	-	98	87.195	ENSGACG00000020810	nop16	100	87.195
ENSGACG00000020819	-	100	86.857	ENSGACG00000003122	-	100	93.162
ENSGACG00000020819	-	100	93.605	ENSGACG00000002618	-	100	93.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020819	-	99	67.647	ENSAPOG00000010682	-	97	67.647	Acanthochromis_polyacanthus
ENSGACG00000020819	-	98	52.353	ENSAMEG00000006988	-	96	52.353	Ailuropoda_melanoleuca
ENSGACG00000020819	-	100	64.286	ENSACIG00000019263	nop16	97	64.286	Amphilophus_citrinellus
ENSGACG00000020819	-	99	68.235	ENSAOCG00000005504	nop16	97	68.235	Amphiprion_ocellaris
ENSGACG00000020819	-	99	68.235	ENSAPEG00000006605	nop16	97	68.235	Amphiprion_percula
ENSGACG00000020819	-	100	72.674	ENSATEG00000014089	nop16	97	72.674	Anabas_testudineus
ENSGACG00000020819	-	98	56.395	ENSACAG00000006333	-	96	56.395	Anolis_carolinensis
ENSGACG00000020819	-	98	50.898	ENSANAG00000015743	-	94	50.898	Aotus_nancymaae
ENSGACG00000020819	-	98	46.108	ENSANAG00000027410	-	94	46.108	Aotus_nancymaae
ENSGACG00000020819	-	100	64.286	ENSACLG00000025227	nop16	97	64.286	Astatotilapia_calliptera
ENSGACG00000020819	-	98	49.697	ENSAMXG00000006843	nop16	91	50.000	Astyanax_mexicanus
ENSGACG00000020819	-	98	52.941	ENSBTAG00000010734	NOP16	96	52.941	Bos_taurus
ENSGACG00000020819	-	98	51.765	ENSCAFG00000016694	NOP16	96	51.765	Canis_familiaris
ENSGACG00000020819	-	98	51.765	ENSCAFG00020011505	-	90	51.765	Canis_lupus_dingo
ENSGACG00000020819	-	98	52.941	ENSCHIG00000022082	-	96	52.941	Capra_hircus
ENSGACG00000020819	-	98	52.353	ENSTSYG00000030409	-	96	52.353	Carlito_syrichta
ENSGACG00000020819	-	98	46.471	ENSTSYG00000032690	-	95	46.471	Carlito_syrichta
ENSGACG00000020819	-	98	51.765	ENSCPOG00000026072	-	96	51.765	Cavia_porcellus
ENSGACG00000020819	-	94	51.875	ENSCCAG00000026775	-	93	51.875	Cebus_capucinus
ENSGACG00000020819	-	98	51.176	ENSCLAG00000015405	-	96	51.176	Chinchilla_lanigera
ENSGACG00000020819	-	98	52.941	ENSCSAG00000009400	-	96	52.941	Chlorocebus_sabaeus
ENSGACG00000020819	-	99	49.714	ENSCPBG00000022647	-	95	49.714	Chrysemys_picta_bellii
ENSGACG00000020819	-	92	36.585	ENSCING00000006179	-	81	35.099	Ciona_intestinalis
ENSGACG00000020819	-	92	39.744	ENSCSAVG00000000269	-	78	38.849	Ciona_savignyi
ENSGACG00000020819	-	98	52.941	ENSCGRG00001004259	Nop16	96	52.941	Cricetulus_griseus_chok1gshd
ENSGACG00000020819	-	98	52.941	ENSCGRG00000010975	Nop16	96	52.941	Cricetulus_griseus_crigri
ENSGACG00000020819	-	99	60.355	ENSCSEG00000020523	nop16	91	60.510	Cynoglossus_semilaevis
ENSGACG00000020819	-	100	66.471	ENSCVAG00000020140	nop16	97	66.471	Cyprinodon_variegatus
ENSGACG00000020819	-	99	49.701	ENSDARG00000044402	nop16	91	49.032	Danio_rerio
ENSGACG00000020819	-	98	52.071	ENSDNOG00000042890	-	95	52.071	Dasypus_novemcinctus
ENSGACG00000020819	-	99	53.488	ENSDORG00000008872	Nop16	96	53.529	Dipodomys_ordii
ENSGACG00000020819	-	91	39.130	ENSEBUG00000011196	nop16	82	38.255	Eptatretus_burgeri
ENSGACG00000020819	-	98	52.353	ENSEASG00005011988	-	96	52.353	Equus_asinus_asinus
ENSGACG00000020819	-	98	52.941	ENSECAG00000021354	NOP16	96	52.941	Equus_caballus
ENSGACG00000020819	-	98	59.649	ENSELUG00000000401	nop16	90	59.748	Esox_lucius
ENSGACG00000020819	-	98	52.941	ENSFCAG00000025473	-	96	52.941	Felis_catus
ENSGACG00000020819	-	99	46.821	ENSFALG00000008553	-	95	46.821	Ficedula_albicollis
ENSGACG00000020819	-	98	50.588	ENSFDAG00000000193	-	96	50.588	Fukomys_damarensis
ENSGACG00000020819	-	100	66.279	ENSFHEG00000016452	nop16	97	66.279	Fundulus_heteroclitus
ENSGACG00000020819	-	99	48.538	ENSGALG00000003355	-	95	48.538	Gallus_gallus
ENSGACG00000020819	-	86	65.068	ENSGAFG00000011616	nop16	81	65.068	Gambusia_affinis
ENSGACG00000020819	-	100	63.095	ENSHBUG00000013527	nop16	97	63.095	Haplochromis_burtoni
ENSGACG00000020819	-	98	51.765	ENSHGLG00000013437	NOP16	96	51.765	Heterocephalus_glaber_female
ENSGACG00000020819	-	98	51.765	ENSHGLG00100011375	NOP16	96	51.765	Heterocephalus_glaber_male
ENSGACG00000020819	-	100	63.953	ENSHCOG00000019999	nop16	91	65.625	Hippocampus_comes
ENSGACG00000020819	-	98	54.268	ENSIPUG00000006682	nop16	90	54.194	Ictalurus_punctatus
ENSGACG00000020819	-	98	51.744	ENSSTOG00000004869	-	96	51.744	Ictidomys_tridecemlineatus
ENSGACG00000020819	-	98	51.765	ENSJJAG00000017655	Nop16	96	51.765	Jaculus_jaculus
ENSGACG00000020819	-	100	66.860	ENSKMAG00000006164	nop16	97	66.860	Kryptolebias_marmoratus
ENSGACG00000020819	-	100	74.419	ENSLBEG00000018355	nop16	79	74.419	Labrus_bergylta
ENSGACG00000020819	-	98	56.471	ENSLACG00000014884	nop16	96	56.471	Latimeria_chalumnae
ENSGACG00000020819	-	99	60.694	ENSLOCG00000012348	nop16	95	60.694	Lepisosteus_oculatus
ENSGACG00000020819	-	98	52.071	ENSLAFG00000017886	-	95	52.071	Loxodonta_africana
ENSGACG00000020819	-	100	70.349	ENSMAMG00000021868	nop16	97	70.349	Mastacembelus_armatus
ENSGACG00000020819	-	100	64.286	ENSMZEG00005012112	nop16	97	64.286	Maylandia_zebra
ENSGACG00000020819	-	50	55.422	ENSMGAG00000004726	-	81	55.422	Meleagris_gallopavo
ENSGACG00000020819	-	93	48.428	ENSMAUG00000015569	-	93	48.408	Mesocricetus_auratus
ENSGACG00000020819	-	51	59.770	ENSMAUG00000009852	-	82	59.770	Mesocricetus_auratus
ENSGACG00000020819	-	98	52.353	ENSMOCG00000020788	Nop16	96	52.353	Microtus_ochrogaster
ENSGACG00000020819	-	99	70.000	ENSMMOG00000016054	nop16	99	70.000	Mola_mola
ENSGACG00000020819	-	98	53.216	ENSMODG00000005214	-	96	53.216	Monodelphis_domestica
ENSGACG00000020819	-	100	73.837	ENSMALG00000021263	nop16	97	73.837	Monopterus_albus
ENSGACG00000020819	-	98	51.765	MGP_CAROLIEiJ_G0018538	Nop16	97	51.163	Mus_caroli
ENSGACG00000020819	-	98	52.353	ENSMUSG00000025869	Nop16	97	51.744	Mus_musculus
ENSGACG00000020819	-	98	52.941	MGP_PahariEiJ_G0019603	Nop16	96	52.941	Mus_pahari
ENSGACG00000020819	-	98	52.353	MGP_SPRETEiJ_G0019418	Nop16	97	51.744	Mus_spretus
ENSGACG00000020819	-	98	51.176	ENSMPUG00000016964	-	89	51.266	Mustela_putorius_furo
ENSGACG00000020819	-	98	52.353	ENSMPUG00000012552	-	96	52.353	Mustela_putorius_furo
ENSGACG00000020819	-	98	50.888	ENSMLUG00000003504	-	95	50.888	Myotis_lucifugus
ENSGACG00000020819	-	98	52.941	ENSNGAG00000018045	Nop16	96	52.941	Nannospalax_galili
ENSGACG00000020819	-	100	62.500	ENSNBRG00000015181	nop16	98	62.500	Neolamprologus_brichardi
ENSGACG00000020819	-	98	51.176	ENSODEG00000009586	-	96	51.176	Octodon_degus
ENSGACG00000020819	-	100	66.071	ENSONIG00000016417	nop16	97	66.071	Oreochromis_niloticus
ENSGACG00000020819	-	98	52.353	ENSOCUG00000013171	-	96	52.353	Oryctolagus_cuniculus
ENSGACG00000020819	-	100	66.071	ENSORLG00000026611	nop16	97	66.071	Oryzias_latipes
ENSGACG00000020819	-	100	67.262	ENSOMEG00000023001	nop16	97	67.262	Oryzias_melastigma
ENSGACG00000020819	-	98	52.353	ENSOGAG00000000824	-	96	52.353	Otolemur_garnettii
ENSGACG00000020819	-	98	52.941	ENSOARG00000002165	-	96	52.941	Ovis_aries
ENSGACG00000020819	-	98	52.353	ENSPPAG00000035473	-	96	52.353	Pan_paniscus
ENSGACG00000020819	-	98	52.941	ENSPPRG00000016600	-	96	52.941	Panthera_pardus
ENSGACG00000020819	-	98	52.941	ENSPTIG00000011708	-	96	52.941	Panthera_tigris_altaica
ENSGACG00000020819	-	98	52.353	ENSPTRG00000017560	NOP16	96	52.353	Pan_troglodytes
ENSGACG00000020819	-	98	55.689	ENSPKIG00000009587	nop16	95	55.689	Paramormyrops_kingsleyae
ENSGACG00000020819	-	78	55.147	ENSPSIG00000013546	-	94	55.147	Pelodiscus_sinensis
ENSGACG00000020819	-	96	68.485	ENSPMGG00000003443	nop16	96	68.485	Periophthalmus_magnuspinnatus
ENSGACG00000020819	-	98	52.353	ENSPEMG00000020268	Nop16	96	52.353	Peromyscus_maniculatus_bairdii
ENSGACG00000020819	-	98	52.047	ENSPCIG00000009782	-	96	52.047	Phascolarctos_cinereus
ENSGACG00000020819	-	100	67.442	ENSPFOG00000010549	nop16	97	67.442	Poecilia_formosa
ENSGACG00000020819	-	80	70.370	ENSPLAG00000007124	nop16	71	70.370	Poecilia_latipinna
ENSGACG00000020819	-	100	68.023	ENSPMEG00000008611	nop16	97	68.023	Poecilia_mexicana
ENSGACG00000020819	-	100	66.860	ENSPREG00000012940	nop16	97	66.860	Poecilia_reticulata
ENSGACG00000020819	-	98	52.353	ENSPPYG00000016070	-	96	52.353	Pongo_abelii
ENSGACG00000020819	-	100	63.690	ENSPNYG00000013529	nop16	97	63.690	Pundamilia_nyererei
ENSGACG00000020819	-	98	50.610	ENSPNAG00000016233	nop16	92	50.968	Pygocentrus_nattereri
ENSGACG00000020819	-	99	50.296	ENSRNOG00000017284	Nop16	95	50.296	Rattus_norvegicus
ENSGACG00000020819	-	98	52.941	ENSSHAG00000001724	-	96	52.941	Sarcophilus_harrisii
ENSGACG00000020819	-	93	54.658	ENSSFOG00015010537	nop16	72	55.000	Scleropages_formosus
ENSGACG00000020819	-	100	73.256	ENSSDUG00000022349	nop16	97	73.256	Seriola_dumerili
ENSGACG00000020819	-	100	73.837	ENSSLDG00000025171	nop16	97	73.837	Seriola_lalandi_dorsalis
ENSGACG00000020819	-	76	43.077	ENSSARG00000006699	-	61	43.077	Sorex_araneus
ENSGACG00000020819	-	98	55.294	ENSSPUG00000006508	-	95	55.294	Sphenodon_punctatus
ENSGACG00000020819	-	99	68.235	ENSSPAG00000011772	nop16	97	68.235	Stegastes_partitus
ENSGACG00000020819	-	98	52.941	ENSSSCG00000029577	-	96	52.941	Sus_scrofa
ENSGACG00000020819	-	99	48.276	ENSTGUG00000000543	-	95	48.276	Taeniopygia_guttata
ENSGACG00000020819	-	99	67.059	ENSTRUG00000020255	nop16	96	67.059	Takifugu_rubripes
ENSGACG00000020819	-	100	67.442	ENSTNIG00000007616	nop16	97	67.442	Tetraodon_nigroviridis
ENSGACG00000020819	-	98	51.765	ENSUAMG00000005139	-	96	51.765	Ursus_americanus
ENSGACG00000020819	-	98	51.765	ENSVVUG00000001697	-	90	51.765	Vulpes_vulpes
ENSGACG00000020819	-	92	48.366	ENSXETG00000022342	nop16	91	48.366	Xenopus_tropicalis
ENSGACG00000020819	-	99	66.667	ENSXCOG00000018829	nop16	98	66.667	Xiphophorus_couchianus
ENSGACG00000020819	-	100	68.023	ENSXMAG00000029113	nop16	97	68.023	Xiphophorus_maculatus