EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000020904 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2754 bases
Position: chrgroupVII:27754217-27756970
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000027641	SRA1	PF07304.11	1.3e-71	1	1
ENSGACP00000027642	SRA1	PF07304.11	7.2e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000027694	-	737	-	ENSGACP00000027642	232 (aa)	-	G3QCM6
ENSGACT00000027693	-	805	-	ENSGACP00000027641	233 (aa)	-	G3QCM5

Gene Model

Click here to download ENSGACG00000020904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000020904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000020904	-	98	52.340	ENSG00000213523	SRA1	87	51.942	Homo_sapiens
ENSGACG00000020904	-	89	53.333	ENSAMEG00000011005	SRA1	88	52.381	Ailuropoda_melanoleuca
ENSGACG00000020904	-	88	73.303	ENSACIG00000017574	-	90	69.124	Amphilophus_citrinellus
ENSGACG00000020904	-	94	70.386	ENSAOCG00000019366	-	96	70.996	Amphiprion_ocellaris
ENSGACG00000020904	-	94	70.386	ENSAPEG00000004211	-	96	70.996	Amphiprion_percula
ENSGACG00000020904	-	91	69.955	ENSATEG00000013578	-	98	67.265	Anabas_testudineus
ENSGACG00000020904	-	88	44.749	ENSACAG00000013148	SRA1	89	48.095	Anolis_carolinensis
ENSGACG00000020904	-	93	53.182	ENSANAG00000020391	SRA1	86	51.724	Aotus_nancymaae
ENSGACG00000020904	-	92	65.517	ENSACLG00000002061	-	82	63.755	Astatotilapia_calliptera
ENSGACG00000020904	-	89	50.685	ENSAMXG00000032750	sra1	87	55.340	Astyanax_mexicanus
ENSGACG00000020904	-	91	49.770	ENSBTAG00000001449	SRA1	89	50.246	Bos_taurus
ENSGACG00000020904	-	88	54.286	ENSCJAG00000016613	SRA1	86	50.000	Callithrix_jacchus
ENSGACG00000020904	-	87	52.913	ENSCAFG00000005819	SRA1	86	48.768	Canis_familiaris
ENSGACG00000020904	-	87	52.913	ENSCAFG00020001924	SRA1	86	48.768	Canis_lupus_dingo
ENSGACG00000020904	-	92	47.273	ENSCHIG00000013652	SRA1	77	48.039	Capra_hircus
ENSGACG00000020904	-	87	53.883	ENSTSYG00000032938	SRA1	86	52.913	Carlito_syrichta
ENSGACG00000020904	-	56	53.488	ENSCAPG00000013096	SRA1	61	59.615	Cavia_aperea
ENSGACG00000020904	-	88	51.707	ENSCPOG00000020210	SRA1	87	51.980	Cavia_porcellus
ENSGACG00000020904	-	94	51.131	ENSCCAG00000029225	SRA1	87	50.962	Cebus_capucinus
ENSGACG00000020904	-	96	51.754	ENSCATG00000044295	SRA1	88	50.971	Cercocebus_atys
ENSGACG00000020904	-	86	54.229	ENSCLAG00000003359	SRA1	88	51.456	Chinchilla_lanigera
ENSGACG00000020904	-	96	51.754	ENSCSAG00000012824	SRA1	88	50.971	Chlorocebus_sabaeus
ENSGACG00000020904	-	85	45.455	ENSCPBG00000007590	SRA1	90	49.268	Chrysemys_picta_bellii
ENSGACG00000020904	-	78	37.173	ENSCING00000014906	-	96	35.106	Ciona_intestinalis
ENSGACG00000020904	-	96	50.877	ENSCANG00000036375	SRA1	88	50.000	Colobus_angolensis_palliatus
ENSGACG00000020904	-	95	50.224	ENSCGRG00001005557	-	84	49.519	Cricetulus_griseus_chok1gshd
ENSGACG00000020904	-	95	50.224	ENSCGRG00000007079	-	89	49.519	Cricetulus_griseus_crigri
ENSGACG00000020904	-	92	61.441	ENSCSEG00000020723	-	98	64.824	Cynoglossus_semilaevis
ENSGACG00000020904	-	95	63.559	ENSCVAG00000019294	-	85	61.947	Cyprinodon_variegatus
ENSGACG00000020904	-	86	54.808	ENSDARG00000053619	sra1	96	53.202	Danio_rerio
ENSGACG00000020904	-	87	53.883	ENSDNOG00000045277	SRA1	82	52.427	Dasypus_novemcinctus
ENSGACG00000020904	-	54	56.800	ENSDORG00000026790	-	68	57.143	Dipodomys_ordii
ENSGACG00000020904	-	82	34.021	ENSEBUG00000006644	sra1	96	32.292	Eptatretus_burgeri
ENSGACG00000020904	-	87	52.913	ENSEASG00005017485	SRA1	84	50.239	Equus_asinus_asinus
ENSGACG00000020904	-	84	53.769	ENSECAG00000014366	SRA1	84	50.990	Equus_caballus
ENSGACG00000020904	-	91	51.628	ENSFCAG00000035180	SRA1	89	49.057	Felis_catus
ENSGACG00000020904	-	86	52.500	ENSFALG00000009306	SRA1	85	51.961	Ficedula_albicollis
ENSGACG00000020904	-	89	52.885	ENSFDAG00000001810	SRA1	86	51.232	Fukomys_damarensis
ENSGACG00000020904	-	93	63.478	ENSFHEG00000003267	-	83	63.721	Fundulus_heteroclitus
ENSGACG00000020904	-	88	55.122	ENSGMOG00000012361	-	99	54.455	Gadus_morhua
ENSGACG00000020904	-	92	44.196	ENSGALG00000040453	SRA1	88	47.423	Gallus_gallus
ENSGACG00000020904	-	93	66.376	ENSGAFG00000022037	-	68	60.965	Gambusia_affinis
ENSGACG00000020904	-	87	48.598	ENSGAGG00000000284	SRA1	92	49.524	Gopherus_agassizii
ENSGACG00000020904	-	97	52.361	ENSGGOG00000042935	SRA1	87	51.942	Gorilla_gorilla
ENSGACG00000020904	-	68	70.253	ENSHBUG00000010633	-	74	75.862	Haplochromis_burtoni
ENSGACG00000020904	-	91	50.235	ENSHGLG00000010259	SRA1	88	50.971	Heterocephalus_glaber_female
ENSGACG00000020904	-	91	50.235	ENSHGLG00100006596	SRA1	88	50.971	Heterocephalus_glaber_male
ENSGACG00000020904	-	91	57.143	ENSHCOG00000013146	-	96	60.000	Hippocampus_comes
ENSGACG00000020904	-	86	53.241	ENSIPUG00000020481	sra1	94	50.000	Ictalurus_punctatus
ENSGACG00000020904	-	87	53.171	ENSSTOG00000024229	SRA1	87	51.208	Ictidomys_tridecemlineatus
ENSGACG00000020904	-	84	54.315	ENSJJAG00000014326	-	85	53.000	Jaculus_jaculus
ENSGACG00000020904	-	96	68.511	ENSLBEG00000002280	-	93	69.266	Labrus_bergylta
ENSGACG00000020904	-	83	52.404	ENSLACG00000007697	SRA1	88	47.115	Latimeria_chalumnae
ENSGACG00000020904	-	86	49.107	ENSLOCG00000011051	SRA1	91	52.632	Lepisosteus_oculatus
ENSGACG00000020904	-	88	52.381	ENSLAFG00000020802	SRA1	87	52.153	Loxodonta_africana
ENSGACG00000020904	-	96	51.754	ENSMFAG00000007347	SRA1	88	50.971	Macaca_fascicularis
ENSGACG00000020904	-	96	51.754	ENSMMUG00000001706	SRA1	88	50.971	Macaca_mulatta
ENSGACG00000020904	-	96	51.754	ENSMNEG00000029401	SRA1	88	50.971	Macaca_nemestrina
ENSGACG00000020904	-	96	51.316	ENSMLEG00000036807	SRA1	88	50.971	Mandrillus_leucophaeus
ENSGACG00000020904	-	93	67.672	ENSMAMG00000012359	-	85	64.912	Mastacembelus_armatus
ENSGACG00000020904	-	92	65.801	ENSMZEG00005024979	-	82	64.192	Maylandia_zebra
ENSGACG00000020904	-	92	65.801	ENSMZEG00005025134	-	82	64.192	Maylandia_zebra
ENSGACG00000020904	-	96	50.667	ENSMAUG00000012789	-	93	48.879	Mesocricetus_auratus
ENSGACG00000020904	-	88	54.327	ENSMICG00000044059	SRA1	88	50.732	Microcebus_murinus
ENSGACG00000020904	-	96	49.115	ENSMOCG00000008156	-	99	44.872	Microtus_ochrogaster
ENSGACG00000020904	-	93	70.690	ENSMALG00000003857	-	95	67.265	Monopterus_albus
ENSGACG00000020904	-	95	48.430	ENSMUSG00000006050	Sra1	89	50.746	Mus_musculus
ENSGACG00000020904	-	87	53.883	ENSMPUG00000008493	SRA1	86	51.942	Mustela_putorius_furo
ENSGACG00000020904	-	91	52.778	ENSMLUG00000022959	SRA1	96	49.296	Myotis_lucifugus
ENSGACG00000020904	-	95	50.224	ENSNGAG00000017765	-	100	47.982	Nannospalax_galili
ENSGACG00000020904	-	87	56.250	ENSNLEG00000034424	SRA1	87	51.942	Nomascus_leucogenys
ENSGACG00000020904	-	87	50.000	ENSMEUG00000013640	SRA1	87	48.276	Notamacropus_eugenii
ENSGACG00000020904	-	88	50.000	ENSOPRG00000018381	SRA1	88	48.309	Ochotona_princeps
ENSGACG00000020904	-	94	51.351	ENSODEG00000003997	SRA1	90	50.226	Octodon_degus
ENSGACG00000020904	-	88	64.706	ENSONIG00000017849	-	50	79.032	Oreochromis_niloticus
ENSGACG00000020904	-	87	50.732	ENSOCUG00000021569	SRA1	88	49.038	Oryctolagus_cuniculus
ENSGACG00000020904	-	93	57.143	ENSORLG00000022839	sra1	52	65.625	Oryzias_latipes
ENSGACG00000020904	-	93	56.379	ENSORLG00020013412	-	52	65.625	Oryzias_latipes_hni
ENSGACG00000020904	-	93	54.286	ENSOMEG00000009187	-	52	61.719	Oryzias_melastigma
ENSGACG00000020904	-	87	54.106	ENSOGAG00000025549	SRA1	88	49.515	Otolemur_garnettii
ENSGACG00000020904	-	92	48.869	ENSOARG00000018101	SRA1	87	49.275	Ovis_aries
ENSGACG00000020904	-	97	52.361	ENSPPAG00000032469	SRA1	87	51.942	Pan_paniscus
ENSGACG00000020904	-	91	51.628	ENSPPRG00000023984	SRA1	89	49.057	Panthera_pardus
ENSGACG00000020904	-	91	51.628	ENSPTIG00000011361	SRA1	89	49.057	Panthera_tigris_altaica
ENSGACG00000020904	-	97	52.361	ENSPTRG00000017314	SRA1	87	51.942	Pan_troglodytes
ENSGACG00000020904	-	96	52.193	ENSPANG00000008615	SRA1	88	51.456	Papio_anubis
ENSGACG00000020904	-	86	56.459	ENSPKIG00000019491	sra1	91	55.392	Paramormyrops_kingsleyae
ENSGACG00000020904	-	71	55.152	ENSPMGG00000018172	-	58	65.000	Periophthalmus_magnuspinnatus
ENSGACG00000020904	-	90	51.659	ENSPEMG00000000489	-	83	48.341	Peromyscus_maniculatus_bairdii
ENSGACG00000020904	-	82	33.180	ENSPMAG00000008631	sra1	50	35.246	Petromyzon_marinus
ENSGACG00000020904	-	84	53.030	ENSPCIG00000017474	SRA1	79	49.490	Phascolarctos_cinereus
ENSGACG00000020904	-	94	60.086	ENSPFOG00000019038	-	90	59.735	Poecilia_formosa
ENSGACG00000020904	-	94	59.657	ENSPLAG00000002438	-	90	59.292	Poecilia_latipinna
ENSGACG00000020904	-	94	60.944	ENSPMEG00000000520	-	90	60.619	Poecilia_mexicana
ENSGACG00000020904	-	94	58.527	ENSPREG00000003284	-	94	53.488	Poecilia_reticulata
ENSGACG00000020904	-	87	55.340	ENSPPYG00000015855	SRA1	86	51.724	Pongo_abelii
ENSGACG00000020904	-	69	44.118	ENSPCAG00000016361	SRA1	96	45.625	Procavia_capensis
ENSGACG00000020904	-	88	54.327	ENSPCOG00000010221	SRA1	87	50.732	Propithecus_coquereli
ENSGACG00000020904	-	94	52.679	ENSPVAG00000009698	SRA1	86	50.246	Pteropus_vampyrus
ENSGACG00000020904	-	92	65.517	ENSPNYG00000022136	-	82	63.755	Pundamilia_nyererei
ENSGACG00000020904	-	95	48.879	ENSRNOG00000018089	Sra1	88	51.471	Rattus_norvegicus
ENSGACG00000020904	-	96	51.754	ENSRBIG00000035226	SRA1	88	50.971	Rhinopithecus_bieti
ENSGACG00000020904	-	96	51.316	ENSRROG00000011630	SRA1	88	50.971	Rhinopithecus_roxellana
ENSGACG00000020904	-	94	50.446	ENSSBOG00000011756	SRA1	87	54.634	Saimiri_boliviensis_boliviensis
ENSGACG00000020904	-	83	51.244	ENSSHAG00000016297	SRA1	84	47.959	Sarcophilus_harrisii
ENSGACG00000020904	-	85	52.913	ENSSFOG00015022155	sra1	91	49.515	Scleropages_formosus
ENSGACG00000020904	-	96	63.786	ENSSMAG00000016237	-	91	60.833	Scophthalmus_maximus
ENSGACG00000020904	-	93	67.373	ENSSDUG00000023303	-	98	65.665	Seriola_dumerili
ENSGACG00000020904	-	95	59.729	ENSSLDG00000007472	SRA1	94	94.872	Seriola_lalandi_dorsalis
ENSGACG00000020904	-	85	50.463	ENSSPUG00000015651	SRA1	91	49.751	Sphenodon_punctatus
ENSGACG00000020904	-	93	70.563	ENSSPAG00000011180	-	95	70.742	Stegastes_partitus
ENSGACG00000020904	-	88	52.857	ENSSSCG00000014365	SRA1	73	51.208	Sus_scrofa
ENSGACG00000020904	-	88	64.815	ENSTRUG00000007664	-	93	62.037	Takifugu_rubripes
ENSGACG00000020904	-	97	60.833	ENSTNIG00000007605	-	86	65.278	Tetraodon_nigroviridis
ENSGACG00000020904	-	94	49.776	ENSTTRG00000005574	SRA1	88	51.196	Tursiops_truncatus
ENSGACG00000020904	-	85	55.172	ENSUAMG00000005355	SRA1	89	53.960	Ursus_americanus
ENSGACG00000020904	-	82	55.897	ENSUMAG00000013276	SRA1	72	54.639	Ursus_maritimus
ENSGACG00000020904	-	87	52.913	ENSVVUG00000012374	SRA1	86	48.768	Vulpes_vulpes
ENSGACG00000020904	-	94	46.320	ENSXETG00000032326	sra1	89	49.754	Xenopus_tropicalis
ENSGACG00000020904	-	93	65.789	ENSXMAG00000006613	-	95	60.526	Xiphophorus_maculatus