EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000025 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8156 bases
Position: chrNHOQ01000017.1:476686-484841
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000033	MMR_HSR1	PF01926.23	5e-06	1	1
ENSGAFP00000000034	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000033	-	810	-	ENSGAFP00000000033	269 (aa)	-	-
ENSGAFT00000000034	-	2904	-	ENSGAFP00000000034	399 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000025	arl13b	65	33.143	ENSGAFG00000021449	-	92	33.143
ENSGAFG00000000025	arl13b	73	31.841	ENSGAFG00000020556	arl4cb	87	34.682
ENSGAFG00000000025	arl13b	57	33.548	ENSGAFG00000012819	-	78	34.194
ENSGAFG00000000025	arl13b	68	31.319	ENSGAFG00000010799	arf2b	96	31.319
ENSGAFG00000000025	arl13b	70	31.771	ENSGAFG00000008497	arl8bb	97	31.771
ENSGAFG00000000025	arl13b	72	30.846	ENSGAFG00000006962	arfrp1	95	30.846
ENSGAFG00000000025	arl13b	67	32.973	ENSGAFG00000014283	arl4aa	89	32.973
ENSGAFG00000000025	arl13b	65	33.889	ENSGAFG00000012355	ARL6	92	33.889
ENSGAFG00000000025	arl13b	58	34.783	ENSGAFG00000000058	arl11	99	34.783
ENSGAFG00000000025	arl13b	66	34.066	ENSGAFG00000012473	arl4d	83	34.066
ENSGAFG00000000025	arl13b	67	37.222	ENSGAFG00000015025	arl2	93	37.222
ENSGAFG00000000025	arl13b	62	31.737	ENSGAFG00000003465	arl5a	71	31.737
ENSGAFG00000000025	arl13b	64	33.918	ENSGAFG00000018151	-	90	33.918
ENSGAFG00000000025	arl13b	57	34.615	ENSGAFG00000006973	arl1	90	34.615
ENSGAFG00000000025	arl13b	64	30.058	ENSGAFG00000018703	arf5	91	30.058
ENSGAFG00000000025	arl13b	50	35.036	ENSGAFG00000017776	arl8a	78	35.036
ENSGAFG00000000025	arl13b	84	48.018	ENSGAFG00000019994	arl13a	57	48.018
ENSGAFG00000000025	arl13b	60	32.727	ENSGAFG00000010938	arl8ba	89	32.727
ENSGAFG00000000025	arl13b	68	31.522	ENSGAFG00000009954	-	78	31.522
ENSGAFG00000000025	arl13b	57	33.987	ENSGAFG00000008601	arl3l2	70	33.987
ENSGAFG00000000025	arl13b	62	32.934	ENSGAFG00000021727	arf3b	87	32.934
ENSGAFG00000000025	arl13b	64	32.948	ENSGAFG00000005872	arl3	92	32.948
ENSGAFG00000000025	arl13b	65	32.759	ENSGAFG00000005163	-	92	32.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000025	arl13b	99	82.555	ENSAPOG00000013256	arl13b	99	81.327	Acanthochromis_polyacanthus
ENSGAFG00000000025	arl13b	99	82.134	ENSACIG00000017582	arl13b	95	94.760	Amphilophus_citrinellus
ENSGAFG00000000025	arl13b	99	82.801	ENSAOCG00000002828	arl13b	99	81.572	Amphiprion_ocellaris
ENSGAFG00000000025	arl13b	95	82.171	ENSAPEG00000014654	arl13b	99	80.879	Amphiprion_percula
ENSGAFG00000000025	arl13b	99	78.765	ENSATEG00000017586	arl13b	99	78.186	Anabas_testudineus
ENSGAFG00000000025	arl13b	82	79.545	ENSACAG00000000523	ARL13B	64	76.404	Anolis_carolinensis
ENSGAFG00000000025	arl13b	99	81.454	ENSACLG00000024227	arl13b	89	94.762	Astatotilapia_calliptera
ENSGAFG00000000025	arl13b	84	88.938	ENSAMXG00000042824	arl13b	99	71.282	Astyanax_mexicanus
ENSGAFG00000000025	arl13b	75	80.296	ENSCAPG00000006764	ARL13B	79	79.798	Cavia_aperea
ENSGAFG00000000025	arl13b	98	59.033	ENSCPOG00000002558	ARL13B	98	57.722	Cavia_porcellus
ENSGAFG00000000025	arl13b	78	79.904	ENSCLAG00000006379	ARL13B	99	57.908	Chinchilla_lanigera
ENSGAFG00000000025	arl13b	83	79.821	ENSCPBG00000005599	ARL13B	98	60.235	Chrysemys_picta_bellii
ENSGAFG00000000025	arl13b	86	93.913	ENSCSEG00000005258	arl13b	99	75.184	Cynoglossus_semilaevis
ENSGAFG00000000025	arl13b	99	87.654	ENSCVAG00000001545	arl13b	91	98.261	Cyprinodon_variegatus
ENSGAFG00000000025	arl13b	99	72.953	ENSDARG00000012763	arl13b	99	82.692	Danio_rerio
ENSGAFG00000000025	arl13b	84	55.507	ENSEBUG00000006528	arl13b	90	51.504	Eptatretus_burgeri
ENSGAFG00000000025	arl13b	85	79.476	ENSEEUG00000010823	ARL13B	60	79.724	Erinaceus_europaeus
ENSGAFG00000000025	arl13b	80	77.778	ENSFALG00000001654	ARL13B	99	56.359	Ficedula_albicollis
ENSGAFG00000000025	arl13b	84	79.646	ENSFDAG00000006556	ARL13B	99	60.981	Fukomys_damarensis
ENSGAFG00000000025	arl13b	85	96.507	ENSFHEG00000016049	arl13b	99	85.195	Fundulus_heteroclitus
ENSGAFG00000000025	arl13b	77	88.350	ENSGMOG00000018628	arl13b	98	67.196	Gadus_morhua
ENSGAFG00000000025	arl13b	85	89.520	ENSGACG00000014228	arl13b	99	75.931	Gasterosteus_aculeatus
ENSGAFG00000000025	arl13b	84	79.204	ENSGAGG00000019336	ARL13B	98	59.294	Gopherus_agassizii
ENSGAFG00000000025	arl13b	99	84.653	ENSHBUG00000020619	arl13b	99	83.951	Haplochromis_burtoni
ENSGAFG00000000025	arl13b	81	93.088	ENSHCOG00000006106	arl13b	99	76.440	Hippocampus_comes
ENSGAFG00000000025	arl13b	99	83.292	ENSKMAG00000001122	arl13b	98	83.831	Kryptolebias_marmoratus
ENSGAFG00000000025	arl13b	99	78.272	ENSLBEG00000014612	arl13b	99	77.641	Labrus_bergylta
ENSGAFG00000000025	arl13b	80	88.318	ENSLOCG00000010465	arl13b	99	65.741	Lepisosteus_oculatus
ENSGAFG00000000025	arl13b	99	80.835	ENSMAMG00000021452	arl13b	99	81.081	Mastacembelus_armatus
ENSGAFG00000000025	arl13b	99	84.653	ENSMZEG00005017827	arl13b	99	83.951	Maylandia_zebra
ENSGAFG00000000025	arl13b	99	77.193	ENSMMOG00000010253	arl13b	99	77.444	Mola_mola
ENSGAFG00000000025	arl13b	85	92.576	ENSMALG00000014655	arl13b	98	73.300	Monopterus_albus
ENSGAFG00000000025	arl13b	82	79.545	MGP_CAROLIEiJ_G0020856	Arl13b	99	60.284	Mus_caroli
ENSGAFG00000000025	arl13b	82	79.545	ENSMUSG00000022911	Arl13b	62	73.208	Mus_musculus
ENSGAFG00000000025	arl13b	82	79.545	MGP_PahariEiJ_G0016561	Arl13b	99	60.142	Mus_pahari
ENSGAFG00000000025	arl13b	82	79.545	MGP_SPRETEiJ_G0021763	Arl13b	99	59.198	Mus_spretus
ENSGAFG00000000025	arl13b	77	80.193	ENSMLUG00000017473	ARL13B	95	59.852	Myotis_lucifugus
ENSGAFG00000000025	arl13b	86	94.372	ENSNBRG00000004078	arl13b	93	94.372	Neolamprologus_brichardi
ENSGAFG00000000025	arl13b	85	76.419	ENSNLEG00000001772	ARL13B	99	59.670	Nomascus_leucogenys
ENSGAFG00000000025	arl13b	78	69.378	ENSMEUG00000008036	-	79	64.898	Notamacropus_eugenii
ENSGAFG00000000025	arl13b	85	79.476	ENSODEG00000011381	ARL13B	53	79.476	Octodon_degus
ENSGAFG00000000025	arl13b	99	79.953	ENSONIG00000001864	arl13b	99	79.070	Oreochromis_niloticus
ENSGAFG00000000025	arl13b	99	78.947	ENSORLG00000006350	arl13b	91	93.886	Oryzias_latipes
ENSGAFG00000000025	arl13b	99	78.947	ENSORLG00020013754	arl13b	99	77.805	Oryzias_latipes_hni
ENSGAFG00000000025	arl13b	99	78.947	ENSORLG00015012586	arl13b	99	78.055	Oryzias_latipes_hsok
ENSGAFG00000000025	arl13b	81	89.862	ENSOMEG00000010187	arl13b	89	90.393	Oryzias_melastigma
ENSGAFG00000000025	arl13b	85	80.349	ENSPSIG00000018115	ARL13B	99	59.705	Pelodiscus_sinensis
ENSGAFG00000000025	arl13b	99	80.397	ENSPMGG00000004584	arl13b	99	80.397	Periophthalmus_magnuspinnatus
ENSGAFG00000000025	arl13b	84	62.832	ENSPCIG00000026984	ARL13B	95	46.635	Phascolarctos_cinereus
ENSGAFG00000000025	arl13b	99	94.236	ENSPFOG00000005379	arl13b	99	94.486	Poecilia_formosa
ENSGAFG00000000025	arl13b	95	94.459	ENSPLAG00000008699	arl13b	99	94.723	Poecilia_latipinna
ENSGAFG00000000025	arl13b	96	93.247	ENSPMEG00000015387	arl13b	98	94.241	Poecilia_mexicana
ENSGAFG00000000025	arl13b	100	93.500	ENSPREG00000006291	arl13b	100	95.250	Poecilia_reticulata
ENSGAFG00000000025	arl13b	95	80.000	ENSPNYG00000022879	arl13b	97	80.000	Pundamilia_nyererei
ENSGAFG00000000025	arl13b	81	90.323	ENSPNAG00000003803	arl13b	98	72.277	Pygocentrus_nattereri
ENSGAFG00000000025	arl13b	80	71.296	ENSSFOG00015023057	arl13b	85	71.296	Scleropages_formosus
ENSGAFG00000000025	arl13b	84	82.667	ENSSFOG00015005491	arl13b	88	82.667	Scleropages_formosus
ENSGAFG00000000025	arl13b	99	72.927	ENSSMAG00000015450	arl13b	99	73.284	Scophthalmus_maximus
ENSGAFG00000000025	arl13b	95	81.137	ENSSDUG00000005560	arl13b	96	81.654	Seriola_dumerili
ENSGAFG00000000025	arl13b	95	80.879	ENSSLDG00000013361	arl13b	99	81.395	Seriola_lalandi_dorsalis
ENSGAFG00000000025	arl13b	83	78.125	ENSSARG00000003872	ARL13B	98	59.574	Sorex_araneus
ENSGAFG00000000025	arl13b	89	78.243	ENSSPUG00000006649	ARL13B	97	78.243	Sphenodon_punctatus
ENSGAFG00000000025	arl13b	97	81.360	ENSSPAG00000016442	arl13b	91	80.556	Stegastes_partitus
ENSGAFG00000000025	arl13b	88	77.119	ENSTGUG00000013493	ARL13B	98	57.007	Taeniopygia_guttata
ENSGAFG00000000025	arl13b	86	73.043	ENSTRUG00000013035	-	89	73.043	Takifugu_rubripes
ENSGAFG00000000025	arl13b	84	68.860	ENSTRUG00000003641	arl13b	85	68.860	Takifugu_rubripes
ENSGAFG00000000025	arl13b	84	77.434	ENSVVUG00000021511	ARL13B	99	54.588	Vulpes_vulpes
ENSGAFG00000000025	arl13b	78	42.180	ENSXETG00000026166	arl13a	50	42.180	Xenopus_tropicalis
ENSGAFG00000000025	arl13b	85	80.349	ENSXETG00000032383	ARL13B	96	75.094	Xenopus_tropicalis
ENSGAFG00000000025	arl13b	85	100.000	ENSXCOG00000016955	arl13b	99	85.750	Xiphophorus_couchianus
ENSGAFG00000000025	arl13b	100	96.750	ENSXMAG00000002089	arl13b	100	96.750	Xiphophorus_maculatus