EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000000168 (Gene tree)
Gene ID
-
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA binding motif%2C single stranded interacting protein
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
126626 bases
Position
chrNHOQ01000034.1:1493640-1620265
Accession
ZDB-GENE-060929-244
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000000237RRM_1PF00076.222.8e-3212
ENSGAFP00000000237RRM_1PF00076.222.8e-3222
ENSGAFP00000000235RRM_1PF00076.223.1e-3212
ENSGAFP00000000235RRM_1PF00076.223.1e-3222
ENSGAFP00000000236RRM_1PF00076.223.3e-3212
ENSGAFP00000000236RRM_1PF00076.223.3e-3222
ENSGAFP00000000234RRM_1PF00076.224.3e-3212
ENSGAFP00000000234RRM_1PF00076.224.3e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000000237-4442-ENSGAFP00000000235383 (aa)--
ENSGAFT00000000236-4924-ENSGAFP00000000234422 (aa)--
ENSGAFT00000000239-1071-ENSGAFP00000000237356 (aa)--
ENSGAFT00000000238-4696-ENSGAFP00000000236388 (aa)--
Gene Model
Click here to download ENSGAFG00000000168's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000168's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000000168rbms35340.789ENSGAFG00000015151-6740.789
ENSGAFG00000000168rbms37536.250ENSGAFG00000002765celf5a6136.250
ENSGAFG00000000168rbms38462.791ENSGAFG00000011633rbms1a8762.264
ENSGAFG00000000168rbms35736.250ENSGAFG00000021515celf46036.250
ENSGAFG00000000168rbms39568.820ENSGAFG00000007708RBMS19366.933
ENSGAFG00000000168rbms39571.467ENSGAFG00000002548rbms2a9770.180
ENSGAFG00000000168rbms39566.938ENSGAFG00000009648rbms2b8567.330
ENSGAFG00000000168rbms39983.373ENSGAFG00000003329-9983.373
ENSGAFG00000000168rbms38433.750ENSGAFG00000004128celf3a8133.750
ENSGAFG00000000168rbms37633.750ENSGAFG00000012731celf3b9433.750
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000000168rbms310080.425ENSG00000144642RBMS310085.606Homo_sapiens
ENSGAFG00000000168rbms310089.083ENSAPOG00000007266rbms39396.615Acanthochromis_polyacanthus
ENSGAFG00000000168rbms39983.373ENSAPOG00000003432-9983.373Acanthochromis_polyacanthus
ENSGAFG00000000168rbms37475.410ENSAMEG00000005947RBMS310075.410Ailuropoda_melanoleuca
ENSGAFG00000000168rbms38587.375ENSACIG00000006987-8585.174Amphilophus_citrinellus
ENSGAFG00000000168rbms39584.239ENSACIG00000021113RBMS39684.824Amphilophus_citrinellus
ENSGAFG00000000168rbms310095.785ENSAOCG00000021274rbms310095.785Amphiprion_ocellaris
ENSGAFG00000000168rbms39584.553ENSAOCG00000024104-9977.045Amphiprion_ocellaris
ENSGAFG00000000168rbms39977.143ENSAPEG00000009481-9977.143Amphiprion_percula
ENSGAFG00000000168rbms39195.137ENSAPEG00000016299rbms39396.011Amphiprion_percula
ENSGAFG00000000168rbms39983.373ENSATEG00000008433-9983.373Anabas_testudineus
ENSGAFG00000000168rbms310095.765ENSATEG00000024295rbms310095.765Anabas_testudineus
ENSGAFG00000000168rbms39979.032ENSAPLG00000012270RBMS310079.263Anas_platyrhynchos
ENSGAFG00000000168rbms310080.660ENSACAG00000028664RBMS39980.896Anolis_carolinensis
ENSGAFG00000000168rbms310078.032ENSANAG00000021899RBMS310078.032Aotus_nancymaae
ENSGAFG00000000168rbms310095.283ENSACLG00000018506rbms310095.128Astatotilapia_calliptera
ENSGAFG00000000168rbms39584.011ENSACLG00000008976-9475.901Astatotilapia_calliptera
ENSGAFG00000000168rbms310082.311ENSAMXG00000020388rbms310084.434Astyanax_mexicanus
ENSGAFG00000000168rbms36981.749ENSAMXG00000043770-10081.749Astyanax_mexicanus
ENSGAFG00000000168rbms310080.660ENSBTAG00000044062RBMS310080.660Bos_taurus
ENSGAFG00000000168rbms310078.032ENSCJAG00000004312RBMS310078.032Callithrix_jacchus
ENSGAFG00000000168rbms310077.854ENSCAFG00000005464RBMS39977.854Canis_familiaris
ENSGAFG00000000168rbms310077.854ENSCAFG00020024980RBMS310077.854Canis_lupus_dingo
ENSGAFG00000000168rbms310080.189ENSCHIG00000009144RBMS39980.189Capra_hircus
ENSGAFG00000000168rbms38277.545ENSTSYG00000002615RBMS310077.545Carlito_syrichta
ENSGAFG00000000168rbms39478.747ENSCAPG00000017783RBMS39876.546Cavia_aperea
ENSGAFG00000000168rbms310080.896ENSCPOG00000006457RBMS39980.896Cavia_porcellus
ENSGAFG00000000168rbms310078.032ENSCCAG00000008671RBMS310078.032Cebus_capucinus
ENSGAFG00000000168rbms310077.803ENSCATG00000013222RBMS310077.803Cercocebus_atys
ENSGAFG00000000168rbms310080.660ENSCLAG00000005866RBMS39980.660Chinchilla_lanigera
ENSGAFG00000000168rbms37077.737ENSCSAG00000009655RBMS39977.737Chlorocebus_sabaeus
ENSGAFG00000000168rbms38684.000ENSCHOG00000000758RBMS38178.310Choloepus_hoffmanni
ENSGAFG00000000168rbms310081.132ENSCPBG00000022678RBMS39882.677Chrysemys_picta_bellii
ENSGAFG00000000168rbms310078.032ENSCANG00000032137RBMS310078.032Colobus_angolensis_palliatus
ENSGAFG00000000168rbms310075.708ENSCGRG00001007243Rbms39978.774Cricetulus_griseus_chok1gshd
ENSGAFG00000000168rbms310075.708ENSCGRG00000004599Rbms39978.774Cricetulus_griseus_crigri
ENSGAFG00000000168rbms310093.427ENSCSEG00000010011RBMS310091.549Cynoglossus_semilaevis
ENSGAFG00000000168rbms310083.019ENSCSEG00000014677-9488.710Cynoglossus_semilaevis
ENSGAFG00000000168rbms39982.429ENSCVAG00000022814-9982.898Cyprinodon_variegatus
ENSGAFG00000000168rbms310098.104ENSCVAG00000022354rbms310098.104Cyprinodon_variegatus
ENSGAFG00000000168rbms310083.215ENSDARG00000044574rbms310089.262Danio_rerio
ENSGAFG00000000168rbms310079.481ENSDNOG00000016645RBMS39779.481Dasypus_novemcinctus
ENSGAFG00000000168rbms310079.953ENSDORG00000007220Rbms39979.953Dipodomys_ordii
ENSGAFG00000000168rbms38764.689ENSETEG00000009485-8164.689Echinops_telfairi
ENSGAFG00000000168rbms37255.769ENSEBUG00000005830rbms38355.769Eptatretus_burgeri
ENSGAFG00000000168rbms310082.078ENSEASG00005006152RBMS39982.078Equus_asinus_asinus
ENSGAFG00000000168rbms310082.078ENSECAG00000017871RBMS39982.078Equus_caballus
ENSGAFG00000000168rbms39071.899ENSEEUG00000014337RBMS310071.899Erinaceus_europaeus
ENSGAFG00000000168rbms310081.378ENSELUG00000002862rbms310081.378Esox_lucius
ENSGAFG00000000168rbms39982.429ENSELUG00000006905-9888.306Esox_lucius
ENSGAFG00000000168rbms310079.953ENSFCAG00000002130RBMS39979.953Felis_catus
ENSGAFG00000000168rbms310081.132ENSFALG00000009165RBMS39981.368Ficedula_albicollis
ENSGAFG00000000168rbms310080.189ENSFDAG00000008278RBMS39980.189Fukomys_damarensis
ENSGAFG00000000168rbms310090.223ENSFHEG00000004787RBMS39689.326Fundulus_heteroclitus
ENSGAFG00000000168rbms38591.954ENSGMOG00000002600-9776.829Gadus_morhua
ENSGAFG00000000168rbms310081.132ENSGALG00000011439RBMS39981.368Gallus_gallus
ENSGAFG00000000168rbms37078.545ENSGAGG00000004039RBMS310078.545Gopherus_agassizii
ENSGAFG00000000168rbms310078.032ENSGGOG00000007228RBMS310078.032Gorilla_gorilla
ENSGAFG00000000168rbms310079.365ENSHBUG00000019785-9679.138Haplochromis_burtoni
ENSGAFG00000000168rbms37095.539ENSHBUG00000021196rbms39495.539Haplochromis_burtoni
ENSGAFG00000000168rbms310080.189ENSHGLG00000002170RBMS39980.189Heterocephalus_glaber_female
ENSGAFG00000000168rbms310080.189ENSHGLG00100014278RBMS39980.189Heterocephalus_glaber_male
ENSGAFG00000000168rbms39981.754ENSHCOG00000007894-9981.754Hippocampus_comes
ENSGAFG00000000168rbms310083.019ENSIPUG00000017680rbms310085.142Ictalurus_punctatus
ENSGAFG00000000168rbms310080.425ENSSTOG00000006324RBMS39980.425Ictidomys_tridecemlineatus
ENSGAFG00000000168rbms310077.830ENSJJAG00000014708Rbms39977.830Jaculus_jaculus
ENSGAFG00000000168rbms39983.135ENSKMAG00000012586-9983.135Kryptolebias_marmoratus
ENSGAFG00000000168rbms310095.338ENSKMAG00000020500rbms310095.338Kryptolebias_marmoratus
ENSGAFG00000000168rbms39982.619ENSLBEG00000027388-9983.095Labrus_bergylta
ENSGAFG00000000168rbms36584.411ENSLBEG00000006677rbms39784.411Labrus_bergylta
ENSGAFG00000000168rbms310082.783ENSLACG00000010581RBMS310082.783Latimeria_chalumnae
ENSGAFG00000000168rbms37582.993ENSLOCG00000002328rbms310082.993Lepisosteus_oculatus
ENSGAFG00000000168rbms310077.854ENSLAFG00000000354RBMS310077.854Loxodonta_africana
ENSGAFG00000000168rbms310080.425ENSMFAG00000033300RBMS39980.425Macaca_fascicularis
ENSGAFG00000000168rbms310080.425ENSMMUG00000004404RBMS39980.425Macaca_mulatta
ENSGAFG00000000168rbms310078.032ENSMNEG00000035839RBMS310078.032Macaca_nemestrina
ENSGAFG00000000168rbms310077.803ENSMLEG00000029464RBMS310077.803Mandrillus_leucophaeus
ENSGAFG00000000168rbms39485.519ENSMAMG00000002176-8385.827Mastacembelus_armatus
ENSGAFG00000000168rbms310095.070ENSMAMG00000024043rbms310092.488Mastacembelus_armatus
ENSGAFG00000000168rbms310080.230ENSMZEG00005026469-9680.230Maylandia_zebra
ENSGAFG00000000168rbms310095.283ENSMZEG00005006308rbms310094.340Maylandia_zebra
ENSGAFG00000000168rbms310075.708ENSMAUG00000016436Rbms39978.774Mesocricetus_auratus
ENSGAFG00000000168rbms310078.082ENSMICG00000049249RBMS310078.032Microcebus_murinus
ENSGAFG00000000168rbms310077.358ENSMOCG00000006997Rbms39978.538Microtus_ochrogaster
ENSGAFG00000000168rbms39982.857ENSMMOG00000015071-9982.857Mola_mola
ENSGAFG00000000168rbms39096.296ENSMMOG00000008471RBMS39596.562Mola_mola
ENSGAFG00000000168rbms39981.366ENSMODG00000015125RBMS38778.005Monodelphis_domestica
ENSGAFG00000000168rbms310094.836ENSMALG00000019536RBMS310092.958Monopterus_albus
ENSGAFG00000000168rbms39983.848ENSMALG00000009155-9983.848Monopterus_albus
ENSGAFG00000000168rbms310077.123MGP_CAROLIEiJ_G0032783Rbms310081.218Mus_caroli
ENSGAFG00000000168rbms310075.708ENSMUSG00000039607Rbms39985.308Mus_musculus
ENSGAFG00000000168rbms310075.529MGP_PahariEiJ_G0015650Rbms39985.308Mus_pahari
ENSGAFG00000000168rbms310075.708MGP_SPRETEiJ_G0033930Rbms39985.308Mus_spretus
ENSGAFG00000000168rbms310077.854ENSMPUG00000011956RBMS310077.854Mustela_putorius_furo
ENSGAFG00000000168rbms310080.425ENSMLUG00000000659RBMS310080.425Myotis_lucifugus
ENSGAFG00000000168rbms310078.302ENSNGAG00000014039Rbms39980.189Nannospalax_galili
ENSGAFG00000000168rbms39982.898ENSNBRG00000018065-9982.898Neolamprologus_brichardi
ENSGAFG00000000168rbms310078.032ENSNLEG00000004129RBMS310078.032Nomascus_leucogenys
ENSGAFG00000000168rbms39971.233ENSMEUG00000004772RBMS310071.689Notamacropus_eugenii
ENSGAFG00000000168rbms39978.032ENSOPRG00000006808RBMS38578.032Ochotona_princeps
ENSGAFG00000000168rbms310080.189ENSODEG00000003651RBMS39980.189Octodon_degus
ENSGAFG00000000168rbms39596.206ENSONIG00000007172rbms310090.284Oreochromis_niloticus
ENSGAFG00000000168rbms310079.224ENSOANG00000010529RBMS39979.224Ornithorhynchus_anatinus
ENSGAFG00000000168rbms310077.397ENSOCUG00000004840RBMS39977.397Oryctolagus_cuniculus
ENSGAFG00000000168rbms310094.076ENSORLG00000005370RBMS310094.076Oryzias_latipes
ENSGAFG00000000168rbms39984.086ENSORLG00000002306-9984.086Oryzias_latipes
ENSGAFG00000000168rbms39984.086ENSORLG00020008496-9984.086Oryzias_latipes_hni
ENSGAFG00000000168rbms310094.076ENSORLG00020022674RBMS310094.076Oryzias_latipes_hni
ENSGAFG00000000168rbms39984.086ENSORLG00015015719-9984.086Oryzias_latipes_hsok
ENSGAFG00000000168rbms310094.313ENSORLG00015005509rbms310094.313Oryzias_latipes_hsok
ENSGAFG00000000168rbms39983.204ENSOMEG00000007677-9587.462Oryzias_melastigma
ENSGAFG00000000168rbms310094.588ENSOMEG00000014805RBMS310094.588Oryzias_melastigma
ENSGAFG00000000168rbms310077.169ENSOARG00000014684RBMS39977.169Ovis_aries
ENSGAFG00000000168rbms310078.032ENSPPAG00000036519RBMS310078.032Pan_paniscus
ENSGAFG00000000168rbms310077.346ENSPPRG00000002761RBMS310077.346Panthera_pardus
ENSGAFG00000000168rbms310079.717ENSPTIG00000011568RBMS310079.717Panthera_tigris_altaica
ENSGAFG00000000168rbms310080.425ENSPTRG00000014709RBMS39980.425Pan_troglodytes
ENSGAFG00000000168rbms310077.803ENSPANG00000010234RBMS310077.803Papio_anubis
ENSGAFG00000000168rbms36985.932ENSPKIG00000007989-10085.932Paramormyrops_kingsleyae
ENSGAFG00000000168rbms35087.678ENSPKIG00000016025-7387.678Paramormyrops_kingsleyae
ENSGAFG00000000168rbms310080.660ENSPSIG00000005269RBMS39980.896Pelodiscus_sinensis
ENSGAFG00000000168rbms39292.966ENSPMGG00000021544rbms39193.660Periophthalmus_magnuspinnatus
ENSGAFG00000000168rbms39982.642ENSPMGG00000021683-9982.642Periophthalmus_magnuspinnatus
ENSGAFG00000000168rbms39972.986ENSPEMG00000001117Rbms310076.066Peromyscus_maniculatus_bairdii
ENSGAFG00000000168rbms38586.093ENSPCIG00000006106RBMS38885.377Phascolarctos_cinereus
ENSGAFG00000000168rbms310099.526ENSPFOG00000017887rbms310099.526Poecilia_formosa
ENSGAFG00000000168rbms38396.584ENSPLAG00000016866-8396.584Poecilia_latipinna
ENSGAFG00000000168rbms39983.135ENSPMEG00000002993-9983.135Poecilia_mexicana
ENSGAFG00000000168rbms39584.553ENSPREG00000018221-9786.381Poecilia_reticulata
ENSGAFG00000000168rbms39999.481ENSPREG00000011880rbms39999.433Poecilia_reticulata
ENSGAFG00000000168rbms310065.753ENSPPYG00000014050RBMS38265.753Pongo_abelii
ENSGAFG00000000168rbms310058.904ENSPCAG00000006307RBMS39958.904Procavia_capensis
ENSGAFG00000000168rbms310078.261ENSPCOG00000017136RBMS310078.261Propithecus_coquereli
ENSGAFG00000000168rbms310070.091ENSPVAG00000014037RBMS38378.571Pteropus_vampyrus
ENSGAFG00000000168rbms310095.047ENSPNYG00000010546rbms310094.104Pundamilia_nyererei
ENSGAFG00000000168rbms39982.898ENSPNYG00000012624-9982.898Pundamilia_nyererei
ENSGAFG00000000168rbms310082.547ENSPNAG00000001800rbms310084.670Pygocentrus_nattereri
ENSGAFG00000000168rbms35085.876ENSPNAG00000026763-7685.876Pygocentrus_nattereri
ENSGAFG00000000168rbms310075.943ENSRNOG00000025881Rbms310079.009Rattus_norvegicus
ENSGAFG00000000168rbms310078.261ENSRBIG00000035863RBMS310078.261Rhinopithecus_bieti
ENSGAFG00000000168rbms39580.366ENSRROG00000027512RBMS39877.916Rhinopithecus_roxellana
ENSGAFG00000000168rbms310078.032ENSSBOG00000020232RBMS310078.032Saimiri_boliviensis_boliviensis
ENSGAFG00000000168rbms39482.353ENSSHAG00000002411RBMS39980.387Sarcophilus_harrisii
ENSGAFG00000000168rbms39983.532ENSSFOG00015008578rbms39983.532Scleropages_formosus
ENSGAFG00000000168rbms310090.464ENSSMAG00000004997rbms310092.663Scophthalmus_maximus
ENSGAFG00000000168rbms39085.302ENSSMAG00000020065-9385.302Scophthalmus_maximus
ENSGAFG00000000168rbms310095.540ENSSDUG00000013656RBMS310095.540Seriola_dumerili
ENSGAFG00000000168rbms39983.373ENSSDUG00000019287-9983.373Seriola_dumerili
ENSGAFG00000000168rbms310095.105ENSSLDG00000020276RBMS310095.105Seriola_lalandi_dorsalis
ENSGAFG00000000168rbms39983.373ENSSLDG00000013224-9983.373Seriola_lalandi_dorsalis
ENSGAFG00000000168rbms38371.812ENSSARG00000000695RBMS39866.205Sorex_araneus
ENSGAFG00000000168rbms37677.076ENSSPUG00000017197RBMS39877.076Sphenodon_punctatus
ENSGAFG00000000168rbms39584.553ENSSPAG00000003983-9975.909Stegastes_partitus
ENSGAFG00000000168rbms310095.785ENSSPAG00000020693rbms310095.785Stegastes_partitus
ENSGAFG00000000168rbms310080.189ENSSSCG00000036381RBMS39980.189Sus_scrofa
ENSGAFG00000000168rbms38278.209ENSTGUG00000003572RBMS310078.209Taeniopygia_guttata
ENSGAFG00000000168rbms310092.254ENSTRUG00000021719RBMS310090.141Takifugu_rubripes
ENSGAFG00000000168rbms39971.824ENSTRUG00000007482-9974.292Takifugu_rubripes
ENSGAFG00000000168rbms38387.205ENSTBEG00000005362RBMS39878.393Tupaia_belangeri
ENSGAFG00000000168rbms39977.346ENSTTRG00000006202RBMS310077.346Tursiops_truncatus
ENSGAFG00000000168rbms310077.854ENSUMAG00000000263RBMS39977.854Ursus_maritimus
ENSGAFG00000000168rbms39570.157ENSVPAG00000003842RBMS39868.238Vicugna_pacos
ENSGAFG00000000168rbms39579.896ENSVVUG00000004660RBMS39986.087Vulpes_vulpes
ENSGAFG00000000168rbms37673.786ENSXETG00000032055RBMS39973.786Xenopus_tropicalis
ENSGAFG00000000168rbms39968.193ENSXCOG00000019600-9968.193Xiphophorus_couchianus
ENSGAFG00000000168rbms39983.373ENSXMAG00000014382-9983.373Xiphophorus_maculatus
ENSGAFG00000000168rbms3100100.000ENSXMAG00000021783rbms3100100.000Xiphophorus_maculatus

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