EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000293 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-166g5.4
Alias: -
Full Name: si:ch211-166g5.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8571 bases
Position: chrNHOQ01002480.1:757163-765733
Accession: ZDB-GENE-121214-319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000416	zf-C2H2	PF00096.26	1.5e-29	1	5
ENSGAFP00000000416	zf-C2H2	PF00096.26	1.5e-29	2	5
ENSGAFP00000000416	zf-C2H2	PF00096.26	1.5e-29	3	5
ENSGAFP00000000416	zf-C2H2	PF00096.26	1.5e-29	4	5
ENSGAFP00000000416	zf-C2H2	PF00096.26	1.5e-29	5	5
ENSGAFP00000000416	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000419	-	1455	-	ENSGAFP00000000416	484 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000293	si:ch211-166g5.4	79	40.909	ENSGAFG00000014413	-	72	40.909
ENSGAFG00000000293	si:ch211-166g5.4	66	33.721	ENSGAFG00000014410	-	91	33.721
ENSGAFG00000000293	si:ch211-166g5.4	80	33.953	ENSGAFG00000014419	-	63	37.857
ENSGAFG00000000293	si:ch211-166g5.4	50	32.576	ENSGAFG00000000521	-	65	32.576
ENSGAFG00000000293	si:ch211-166g5.4	52	37.963	ENSGAFG00000010983	-	78	37.963
ENSGAFG00000000293	si:ch211-166g5.4	74	31.163	ENSGAFG00000014085	-	62	30.769
ENSGAFG00000000293	si:ch211-166g5.4	54	43.529	ENSGAFG00000020505	-	58	45.455
ENSGAFG00000000293	si:ch211-166g5.4	53	36.686	ENSGAFG00000020509	-	72	36.686
ENSGAFG00000000293	si:ch211-166g5.4	50	36.264	ENSGAFG00000016595	-	80	37.013
ENSGAFG00000000293	si:ch211-166g5.4	75	31.522	ENSGAFG00000011906	-	60	31.522
ENSGAFG00000000293	si:ch211-166g5.4	76	33.679	ENSGAFG00000019233	prdm5	66	32.143
ENSGAFG00000000293	si:ch211-166g5.4	79	33.333	ENSGAFG00000016322	-	66	33.333
ENSGAFG00000000293	si:ch211-166g5.4	54	40.000	ENSGAFG00000007098	-	95	40.000
ENSGAFG00000000293	si:ch211-166g5.4	53	39.157	ENSGAFG00000011288	-	78	39.157
ENSGAFG00000000293	si:ch211-166g5.4	53	31.076	ENSGAFG00000011287	-	53	30.909
ENSGAFG00000000293	si:ch211-166g5.4	50	33.880	ENSGAFG00000014088	-	61	33.971
ENSGAFG00000000293	si:ch211-166g5.4	52	32.203	ENSGAFG00000012083	-	50	32.203
ENSGAFG00000000293	si:ch211-166g5.4	51	33.493	ENSGAFG00000016093	-	66	38.462
ENSGAFG00000000293	si:ch211-166g5.4	52	39.241	ENSGAFG00000002659	-	72	34.731
ENSGAFG00000000293	si:ch211-166g5.4	79	34.066	ENSGAFG00000021891	znf319b	79	34.066
ENSGAFG00000000293	si:ch211-166g5.4	75	30.952	ENSGAFG00000013116	-	57	30.952
ENSGAFG00000000293	si:ch211-166g5.4	74	38.356	ENSGAFG00000012934	-	82	38.356
ENSGAFG00000000293	si:ch211-166g5.4	54	37.209	ENSGAFG00000018659	-	98	37.209
ENSGAFG00000000293	si:ch211-166g5.4	77	32.979	ENSGAFG00000013471	-	68	33.654
ENSGAFG00000000293	si:ch211-166g5.4	57	36.441	ENSGAFG00000011965	-	77	34.574
ENSGAFG00000000293	si:ch211-166g5.4	60	39.655	ENSGAFG00000013363	-	72	39.655
ENSGAFG00000000293	si:ch211-166g5.4	54	36.913	ENSGAFG00000012069	-	87	37.195
ENSGAFG00000000293	si:ch211-166g5.4	50	34.928	ENSGAFG00000000037	-	66	34.722
ENSGAFG00000000293	si:ch211-166g5.4	92	32.314	ENSGAFG00000013408	-	97	37.126
ENSGAFG00000000293	si:ch211-166g5.4	74	34.632	ENSGAFG00000016587	-	86	36.207
ENSGAFG00000000293	si:ch211-166g5.4	80	41.593	ENSGAFG00000011326	-	98	40.476
ENSGAFG00000000293	si:ch211-166g5.4	79	30.857	ENSGAFG00000011884	-	93	41.333
ENSGAFG00000000293	si:ch211-166g5.4	79	37.313	ENSGAFG00000003150	-	85	38.095
ENSGAFG00000000293	si:ch211-166g5.4	54	35.533	ENSGAFG00000013911	-	94	38.462
ENSGAFG00000000293	si:ch211-166g5.4	81	41.176	ENSGAFG00000014188	-	92	36.686
ENSGAFG00000000293	si:ch211-166g5.4	79	43.678	ENSGAFG00000008274	-	97	43.678
ENSGAFG00000000293	si:ch211-166g5.4	55	32.749	ENSGAFG00000011290	-	50	32.749
ENSGAFG00000000293	si:ch211-166g5.4	79	37.908	ENSGAFG00000012035	-	87	37.908
ENSGAFG00000000293	si:ch211-166g5.4	54	37.870	ENSGAFG00000019072	-	81	41.667
ENSGAFG00000000293	si:ch211-166g5.4	68	34.266	ENSGAFG00000003108	-	86	34.266
ENSGAFG00000000293	si:ch211-166g5.4	52	34.759	ENSGAFG00000013457	-	74	34.759
ENSGAFG00000000293	si:ch211-166g5.4	52	33.491	ENSGAFG00000018302	-	73	33.019
ENSGAFG00000000293	si:ch211-166g5.4	85	34.524	ENSGAFG00000021140	-	99	34.524
ENSGAFG00000000293	si:ch211-166g5.4	50	36.765	ENSGAFG00000001879	-	55	36.765
ENSGAFG00000000293	si:ch211-166g5.4	53	33.649	ENSGAFG00000012987	-	68	33.649
ENSGAFG00000000293	si:ch211-166g5.4	50	42.857	ENSGAFG00000018645	-	62	34.568
ENSGAFG00000000293	si:ch211-166g5.4	79	33.482	ENSGAFG00000013616	-	75	34.419
ENSGAFG00000000293	si:ch211-166g5.4	60	38.806	ENSGAFG00000010259	zbtb16a	50	32.456
ENSGAFG00000000293	si:ch211-166g5.4	84	36.686	ENSGAFG00000001156	-	67	36.686
ENSGAFG00000000293	si:ch211-166g5.4	75	41.860	ENSGAFG00000013934	-	97	37.500
ENSGAFG00000000293	si:ch211-166g5.4	50	41.045	ENSGAFG00000011913	si:ch211-161m3.4	78	41.045
ENSGAFG00000000293	si:ch211-166g5.4	55	40.708	ENSGAFG00000020499	-	61	40.708
ENSGAFG00000000293	si:ch211-166g5.4	52	34.807	ENSGAFG00000011999	-	78	34.756
ENSGAFG00000000293	si:ch211-166g5.4	53	38.519	ENSGAFG00000007104	-	58	38.519
ENSGAFG00000000293	si:ch211-166g5.4	80	32.245	ENSGAFG00000013396	-	77	30.622
ENSGAFG00000000293	si:ch211-166g5.4	79	35.119	ENSGAFG00000013390	-	67	35.119
ENSGAFG00000000293	si:ch211-166g5.4	83	33.014	ENSGAFG00000014097	-	68	36.283
ENSGAFG00000000293	si:ch211-166g5.4	77	35.632	ENSGAFG00000013055	-	84	35.632
ENSGAFG00000000293	si:ch211-166g5.4	76	32.948	ENSGAFG00000012977	-	85	33.140
ENSGAFG00000000293	si:ch211-166g5.4	93	39.306	ENSGAFG00000013677	-	97	40.678
ENSGAFG00000000293	si:ch211-166g5.4	52	37.963	ENSGAFG00000005337	-	76	35.227
ENSGAFG00000000293	si:ch211-166g5.4	54	38.043	ENSGAFG00000014369	-	94	37.714
ENSGAFG00000000293	si:ch211-166g5.4	82	36.970	ENSGAFG00000014362	-	61	36.970
ENSGAFG00000000293	si:ch211-166g5.4	60	31.120	ENSGAFG00000013430	-	93	34.965
ENSGAFG00000000293	si:ch211-166g5.4	50	39.831	ENSGAFG00000011924	-	64	39.831
ENSGAFG00000000293	si:ch211-166g5.4	93	37.349	ENSGAFG00000018820	-	85	37.349
ENSGAFG00000000293	si:ch211-166g5.4	56	32.468	ENSGAFG00000021126	-	58	32.692
ENSGAFG00000000293	si:ch211-166g5.4	53	36.047	ENSGAFG00000003119	-	62	34.400
ENSGAFG00000000293	si:ch211-166g5.4	51	33.166	ENSGAFG00000017761	-	81	33.166
ENSGAFG00000000293	si:ch211-166g5.4	77	31.925	ENSGAFG00000013462	-	64	31.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSG00000103495	MAZ	76	79.085	Homo_sapiens
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSANAG00000036195	-	61	52.989	Aotus_nancymaae
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSBTAG00000052323	MAZ	74	55.150	Bos_taurus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSCJAG00000007189	MAZ	60	52.989	Callithrix_jacchus
ENSGAFG00000000293	si:ch211-166g5.4	58	68.493	ENSCAFG00000016964	MAZ	69	52.989	Canis_familiaris
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSCAFG00020017751	MAZ	74	55.150	Canis_lupus_dingo
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSCHIG00000020711	MAZ	59	52.989	Capra_hircus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSCCAG00000037524	MAZ	60	52.989	Cebus_capucinus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSCATG00000033033	MAZ	60	52.989	Cercocebus_atys
ENSGAFG00000000293	si:ch211-166g5.4	99	90.748	ENSCVAG00000015597	si:ch211-166g5.4	99	90.748	Cyprinodon_variegatus
ENSGAFG00000000293	si:ch211-166g5.4	99	68.303	ENSDARG00000063555	si:ch211-166g5.4	100	81.319	Danio_rerio
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSEASG00005013172	MAZ	73	55.150	Equus_asinus_asinus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSECAG00000024341	MAZ	74	55.150	Equus_caballus
ENSGAFG00000000293	si:ch211-166g5.4	99	75.150	ENSELUG00000022514	si:ch211-166g5.4	99	76.754	Esox_lucius
ENSGAFG00000000293	si:ch211-166g5.4	97	60.437	ENSELUG00000024246	MAZ	96	63.838	Esox_lucius
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSFCAG00000014146	MAZ	62	52.989	Felis_catus
ENSGAFG00000000293	si:ch211-166g5.4	58	74.104	ENSFHEG00000000918	MAZ	96	74.104	Fundulus_heteroclitus
ENSGAFG00000000293	si:ch211-166g5.4	89	53.250	ENSGACG00000014840	maza	92	82.479	Gasterosteus_aculeatus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSMMUG00000019826	MAZ	69	52.316	Macaca_mulatta
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSMNEG00000037329	MAZ	79	68.493	Macaca_nemestrina
ENSGAFG00000000293	si:ch211-166g5.4	55	77.154	ENSMAMG00000018743	-	88	77.154	Mastacembelus_armatus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSMICG00000030392	MAZ	60	52.989	Microcebus_murinus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSMUSG00000030678	Maz	64	54.485	Mus_musculus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	MGP_PahariEiJ_G0013693	Maz	65	54.817	Mus_pahari
ENSGAFG00000000293	si:ch211-166g5.4	58	52.308	ENSMEUG00000009482	MAZ	80	38.034	Notamacropus_eugenii
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSPPRG00000016750	-	62	52.989	Panthera_pardus
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSPTRG00000007968	MAZ	60	52.989	Pan_troglodytes
ENSGAFG00000000293	si:ch211-166g5.4	99	65.392	ENSPKIG00000018202	-	100	70.408	Paramormyrops_kingsleyae
ENSGAFG00000000293	si:ch211-166g5.4	99	89.800	ENSPFOG00000005397	si:ch211-166g5.4	99	90.600	Poecilia_formosa
ENSGAFG00000000293	si:ch211-166g5.4	52	88.492	ENSPLAG00000017219	si:ch211-166g5.4	93	88.492	Poecilia_latipinna
ENSGAFG00000000293	si:ch211-166g5.4	52	88.492	ENSPMEG00000017552	si:ch211-166g5.4	93	88.492	Poecilia_mexicana
ENSGAFG00000000293	si:ch211-166g5.4	99	94.501	ENSPREG00000023113	si:ch211-166g5.4	98	94.501	Poecilia_reticulata
ENSGAFG00000000293	si:ch211-166g5.4	57	79.605	ENSPCOG00000022370	MAZ	60	52.989	Propithecus_coquereli
ENSGAFG00000000293	si:ch211-166g5.4	99	69.057	ENSPNAG00000004042	si:ch211-166g5.4	83	90.625	Pygocentrus_nattereri
ENSGAFG00000000293	si:ch211-166g5.4	80	64.304	ENSSFOG00015021699	si:ch211-166g5.4	100	63.291	Scleropages_formosus
ENSGAFG00000000293	si:ch211-166g5.4	58	68.493	ENSSSCG00000025321	MAZ	62	52.989	Sus_scrofa
ENSGAFG00000000293	si:ch211-166g5.4	99	94.070	ENSXMAG00000023386	si:ch211-166g5.4	99	94.070	Xiphophorus_maculatus