EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000345 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: si:dkey-89b17.4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6197 bases
Position: chrNHOQ01000711.1:92624-98820
Accession: ZDB-GENE-030131-8215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	1	6
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	2	6
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	3	6
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	4	6
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	5	6
ENSGAFP00000000444	zf-C2H2	PF00096.26	1.5e-54	6	6
ENSGAFP00000000444	zf-met	PF12874.7	4.6e-09	1	2
ENSGAFP00000000444	zf-met	PF12874.7	4.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000445	-	3969	-	ENSGAFP00000000444	1245 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000345	si:dkey-89b17.4	62	37.179	ENSGAFG00000013019	-	88	35.556
ENSGAFG00000000345	si:dkey-89b17.4	96	30.631	ENSGAFG00000011884	-	94	30.631
ENSGAFG00000000345	si:dkey-89b17.4	76	40.506	ENSGAFG00000000037	-	72	40.506
ENSGAFG00000000345	si:dkey-89b17.4	89	31.227	ENSGAFG00000018820	-	78	31.227
ENSGAFG00000000345	si:dkey-89b17.4	69	35.000	ENSGAFG00000011938	-	70	35.000
ENSGAFG00000000345	si:dkey-89b17.4	75	39.474	ENSGAFG00000016587	-	88	39.474
ENSGAFG00000000345	si:dkey-89b17.4	85	30.196	ENSGAFG00000008274	-	97	30.196
ENSGAFG00000000345	si:dkey-89b17.4	55	38.053	ENSGAFG00000020501	-	50	38.889
ENSGAFG00000000345	si:dkey-89b17.4	96	35.252	ENSGAFG00000011326	-	77	35.252
ENSGAFG00000000345	si:dkey-89b17.4	95	30.070	ENSGAFG00000011288	-	78	30.070
ENSGAFG00000000345	si:dkey-89b17.4	75	55.556	ENSGAFG00000016353	-	85	55.556
ENSGAFG00000000345	si:dkey-89b17.4	68	30.153	ENSGAFG00000013969	-	93	32.847
ENSGAFG00000000345	si:dkey-89b17.4	62	30.588	ENSGAFG00000012767	-	78	40.789
ENSGAFG00000000345	si:dkey-89b17.4	59	30.116	ENSGAFG00000013677	-	83	30.116
ENSGAFG00000000345	si:dkey-89b17.4	63	33.621	ENSGAFG00000013471	-	69	33.621
ENSGAFG00000000345	si:dkey-89b17.4	61	42.667	ENSGAFG00000011174	-	65	42.667
ENSGAFG00000000345	si:dkey-89b17.4	64	37.383	ENSGAFG00000011924	-	65	37.383
ENSGAFG00000000345	si:dkey-89b17.4	59	39.241	ENSGAFG00000013053	-	52	39.241
ENSGAFG00000000345	si:dkey-89b17.4	83	30.120	ENSGAFG00000013934	-	84	32.710
ENSGAFG00000000345	si:dkey-89b17.4	62	34.921	ENSGAFG00000021131	-	80	36.036
ENSGAFG00000000345	si:dkey-89b17.4	73	30.986	ENSGAFG00000021139	-	94	30.986
ENSGAFG00000000345	si:dkey-89b17.4	67	30.233	ENSGAFG00000002659	-	69	30.233
ENSGAFG00000000345	si:dkey-89b17.4	50	30.973	ENSGAFG00000013624	-	52	30.973
ENSGAFG00000000345	si:dkey-89b17.4	89	33.929	ENSGAFG00000013420	-	66	33.929
ENSGAFG00000000345	si:dkey-89b17.4	96	30.252	ENSGAFG00000013396	-	79	30.252
ENSGAFG00000000345	si:dkey-89b17.4	65	33.333	ENSGAFG00000013000	-	73	33.333
ENSGAFG00000000345	si:dkey-89b17.4	62	30.196	ENSGAFG00000011290	-	60	30.196
ENSGAFG00000000345	si:dkey-89b17.4	85	30.534	ENSGAFG00000014188	-	93	31.674
ENSGAFG00000000345	si:dkey-89b17.4	81	32.735	ENSGAFG00000003150	-	81	32.735
ENSGAFG00000000345	si:dkey-89b17.4	61	37.209	ENSGAFG00000012054	-	52	37.209
ENSGAFG00000000345	si:dkey-89b17.4	85	34.234	ENSGAFG00000013457	-	58	34.234
ENSGAFG00000000345	si:dkey-89b17.4	61	34.234	ENSGAFG00000010983	-	91	34.234
ENSGAFG00000000345	si:dkey-89b17.4	97	31.679	ENSGAFG00000011906	-	61	30.337
ENSGAFG00000000345	si:dkey-89b17.4	95	38.938	ENSGAFG00000018645	-	65	38.017
ENSGAFG00000000345	si:dkey-89b17.4	62	31.841	ENSGAFG00000001481	-	82	37.500
ENSGAFG00000000345	si:dkey-89b17.4	80	31.317	ENSGAFG00000014413	-	71	30.147
ENSGAFG00000000345	si:dkey-89b17.4	62	39.535	ENSGAFG00000012069	-	86	37.719
ENSGAFG00000000345	si:dkey-89b17.4	61	35.897	ENSGAFG00000014362	-	54	35.897
ENSGAFG00000000345	si:dkey-89b17.4	73	33.058	ENSGAFG00000005337	-	57	33.058
ENSGAFG00000000345	si:dkey-89b17.4	82	33.600	ENSGAFG00000011965	-	81	34.146
ENSGAFG00000000345	si:dkey-89b17.4	65	34.091	ENSGAFG00000013430	-	89	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000345	si:dkey-89b17.4	96	42.451	ENSAPOG00000020151	znf646	98	50.000	Acanthochromis_polyacanthus
ENSGAFG00000000345	si:dkey-89b17.4	100	92.914	ENSAPOG00000018015	si:dkey-89b17.4	100	92.834	Acanthochromis_polyacanthus
ENSGAFG00000000345	si:dkey-89b17.4	95	48.193	ENSACIG00000023049	znf646	93	55.072	Amphilophus_citrinellus
ENSGAFG00000000345	si:dkey-89b17.4	100	89.163	ENSACIG00000001025	si:dkey-89b17.4	100	89.163	Amphilophus_citrinellus
ENSGAFG00000000345	si:dkey-89b17.4	96	41.469	ENSAOCG00000012062	znf646	98	42.101	Amphiprion_ocellaris
ENSGAFG00000000345	si:dkey-89b17.4	100	92.914	ENSAOCG00000018684	si:dkey-89b17.4	100	92.834	Amphiprion_ocellaris
ENSGAFG00000000345	si:dkey-89b17.4	98	40.574	ENSAPEG00000006427	znf646	99	41.430	Amphiprion_percula
ENSGAFG00000000345	si:dkey-89b17.4	100	92.914	ENSAPEG00000007719	si:dkey-89b17.4	100	92.834	Amphiprion_percula
ENSGAFG00000000345	si:dkey-89b17.4	96	41.241	ENSATEG00000015206	znf646	98	41.036	Anabas_testudineus
ENSGAFG00000000345	si:dkey-89b17.4	100	92.492	ENSATEG00000016814	si:dkey-89b17.4	100	92.652	Anabas_testudineus
ENSGAFG00000000345	si:dkey-89b17.4	100	91.335	ENSACLG00000016017	si:dkey-89b17.4	100	91.176	Astatotilapia_calliptera
ENSGAFG00000000345	si:dkey-89b17.4	96	41.969	ENSACLG00000012712	znf646	98	42.052	Astatotilapia_calliptera
ENSGAFG00000000345	si:dkey-89b17.4	99	66.769	ENSAMXG00000001155	si:dkey-89b17.4	99	64.996	Astyanax_mexicanus
ENSGAFG00000000345	si:dkey-89b17.4	97	40.649	ENSAMXG00000035525	znf646	91	56.989	Astyanax_mexicanus
ENSGAFG00000000345	si:dkey-89b17.4	98	82.488	ENSCSEG00000010769	si:dkey-89b17.4	99	81.997	Cynoglossus_semilaevis
ENSGAFG00000000345	si:dkey-89b17.4	96	51.786	ENSCSEG00000012389	znf646	98	39.216	Cynoglossus_semilaevis
ENSGAFG00000000345	si:dkey-89b17.4	100	95.913	ENSCVAG00000012420	si:dkey-89b17.4	100	94.712	Cyprinodon_variegatus
ENSGAFG00000000345	si:dkey-89b17.4	99	65.464	ENSDARG00000075545	si:dkey-89b17.4	99	64.357	Danio_rerio
ENSGAFG00000000345	si:dkey-89b17.4	97	48.214	ENSDARG00000061424	znf646	98	48.214	Danio_rerio
ENSGAFG00000000345	si:dkey-89b17.4	96	73.260	ENSELUG00000015516	si:dkey-89b17.4	98	72.770	Esox_lucius
ENSGAFG00000000345	si:dkey-89b17.4	96	42.263	ENSELUG00000010423	znf646	98	48.148	Esox_lucius
ENSGAFG00000000345	si:dkey-89b17.4	100	96.003	ENSFHEG00000019457	si:dkey-89b17.4	100	96.003	Fundulus_heteroclitus
ENSGAFG00000000345	si:dkey-89b17.4	93	59.615	ENSFHEG00000000561	znf646	98	38.172	Fundulus_heteroclitus
ENSGAFG00000000345	si:dkey-89b17.4	96	48.606	ENSGMOG00000016554	znf646	99	60.377	Gadus_morhua
ENSGAFG00000000345	si:dkey-89b17.4	98	77.912	ENSGACG00000014714	si:dkey-89b17.4	99	77.912	Gasterosteus_aculeatus
ENSGAFG00000000345	si:dkey-89b17.4	96	60.377	ENSGACG00000008733	znf646	98	60.377	Gasterosteus_aculeatus
ENSGAFG00000000345	si:dkey-89b17.4	100	91.415	ENSHBUG00000013093	si:dkey-89b17.4	100	91.256	Haplochromis_burtoni
ENSGAFG00000000345	si:dkey-89b17.4	96	42.060	ENSHBUG00000004840	znf646	98	42.047	Haplochromis_burtoni
ENSGAFG00000000345	si:dkey-89b17.4	97	39.937	ENSHCOG00000014890	znf646	100	40.078	Hippocampus_comes
ENSGAFG00000000345	si:dkey-89b17.4	100	86.794	ENSHCOG00000001901	si:dkey-89b17.4	100	86.396	Hippocampus_comes
ENSGAFG00000000345	si:dkey-89b17.4	96	66.426	ENSIPUG00000012845	si:dkey-89b17.4	98	64.389	Ictalurus_punctatus
ENSGAFG00000000345	si:dkey-89b17.4	98	40.954	ENSIPUG00000018102	znf646	99	39.253	Ictalurus_punctatus
ENSGAFG00000000345	si:dkey-89b17.4	94	40.223	ENSKMAG00000011982	znf646	98	40.352	Kryptolebias_marmoratus
ENSGAFG00000000345	si:dkey-89b17.4	100	91.627	ENSKMAG00000014037	si:dkey-89b17.4	100	92.982	Kryptolebias_marmoratus
ENSGAFG00000000345	si:dkey-89b17.4	98	41.240	ENSLBEG00000016562	znf646	99	40.632	Labrus_bergylta
ENSGAFG00000000345	si:dkey-89b17.4	100	91.554	ENSLBEG00000020291	si:dkey-89b17.4	100	91.554	Labrus_bergylta
ENSGAFG00000000345	si:dkey-89b17.4	96	46.774	ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	Lepisosteus_oculatus
ENSGAFG00000000345	si:dkey-89b17.4	100	92.204	ENSMAMG00000009604	si:dkey-89b17.4	100	92.204	Mastacembelus_armatus
ENSGAFG00000000345	si:dkey-89b17.4	98	42.471	ENSMAMG00000009313	znf646	98	42.724	Mastacembelus_armatus
ENSGAFG00000000345	si:dkey-89b17.4	100	91.335	ENSMZEG00005003901	si:dkey-89b17.4	100	91.176	Maylandia_zebra
ENSGAFG00000000345	si:dkey-89b17.4	96	42.080	ENSMZEG00005011264	znf646	98	42.172	Maylandia_zebra
ENSGAFG00000000345	si:dkey-89b17.4	97	42.627	ENSMMOG00000002311	znf646	98	42.743	Mola_mola
ENSGAFG00000000345	si:dkey-89b17.4	100	89.004	ENSMMOG00000012741	si:dkey-89b17.4	100	88.924	Mola_mola
ENSGAFG00000000345	si:dkey-89b17.4	100	91.753	ENSMALG00000019558	si:dkey-89b17.4	100	91.832	Monopterus_albus
ENSGAFG00000000345	si:dkey-89b17.4	97	39.655	ENSMALG00000002274	-	99	39.655	Monopterus_albus
ENSGAFG00000000345	si:dkey-89b17.4	96	41.870	ENSNBRG00000022534	znf646	98	42.122	Neolamprologus_brichardi
ENSGAFG00000000345	si:dkey-89b17.4	98	91.322	ENSNBRG00000020314	si:dkey-89b17.4	98	91.160	Neolamprologus_brichardi
ENSGAFG00000000345	si:dkey-89b17.4	98	41.860	ENSONIG00000019947	-	99	36.816	Oreochromis_niloticus
ENSGAFG00000000345	si:dkey-89b17.4	96	72.663	ENSONIG00000009324	si:dkey-89b17.4	99	72.663	Oreochromis_niloticus
ENSGAFG00000000345	si:dkey-89b17.4	100	89.928	ENSORLG00000024255	si:dkey-89b17.4	100	89.688	Oryzias_latipes
ENSGAFG00000000345	si:dkey-89b17.4	97	38.622	ENSORLG00000007885	znf646	99	38.638	Oryzias_latipes
ENSGAFG00000000345	si:dkey-89b17.4	98	38.876	ENSORLG00020010285	znf646	99	38.626	Oryzias_latipes_hni
ENSGAFG00000000345	si:dkey-89b17.4	96	39.217	ENSORLG00015008733	znf646	99	38.964	Oryzias_latipes_hsok
ENSGAFG00000000345	si:dkey-89b17.4	100	90.488	ENSOMEG00000020587	si:dkey-89b17.4	100	90.240	Oryzias_melastigma
ENSGAFG00000000345	si:dkey-89b17.4	96	39.368	ENSOMEG00000015658	znf646	99	38.880	Oryzias_melastigma
ENSGAFG00000000345	si:dkey-89b17.4	98	34.508	ENSPMGG00000004639	znf646	91	45.714	Periophthalmus_magnuspinnatus
ENSGAFG00000000345	si:dkey-89b17.4	98	70.570	ENSPMGG00000015931	-	97	71.003	Periophthalmus_magnuspinnatus
ENSGAFG00000000345	si:dkey-89b17.4	95	38.208	ENSPFOG00000004826	-	99	38.208	Poecilia_formosa
ENSGAFG00000000345	si:dkey-89b17.4	100	98.877	ENSPFOG00000008241	si:dkey-89b17.4	100	98.877	Poecilia_formosa
ENSGAFG00000000345	si:dkey-89b17.4	100	99.198	ENSPLAG00000011382	si:dkey-89b17.4	100	99.198	Poecilia_latipinna
ENSGAFG00000000345	si:dkey-89b17.4	97	46.341	ENSPLAG00000010454	-	98	47.368	Poecilia_latipinna
ENSGAFG00000000345	si:dkey-89b17.4	97	31.547	ENSPMEG00000018283	znf646	97	51.667	Poecilia_mexicana
ENSGAFG00000000345	si:dkey-89b17.4	100	98.877	ENSPMEG00000000141	si:dkey-89b17.4	100	98.877	Poecilia_mexicana
ENSGAFG00000000345	si:dkey-89b17.4	100	99.118	ENSPREG00000012579	si:dkey-89b17.4	100	99.118	Poecilia_reticulata
ENSGAFG00000000345	si:dkey-89b17.4	97	36.525	ENSPREG00000017637	znf646	98	41.040	Poecilia_reticulata
ENSGAFG00000000345	si:dkey-89b17.4	100	91.415	ENSPNYG00000011901	si:dkey-89b17.4	100	91.256	Pundamilia_nyererei
ENSGAFG00000000345	si:dkey-89b17.4	96	42.080	ENSPNYG00000017692	znf646	98	42.052	Pundamilia_nyererei
ENSGAFG00000000345	si:dkey-89b17.4	96	66.930	ENSPNAG00000022072	si:dkey-89b17.4	98	65.372	Pygocentrus_nattereri
ENSGAFG00000000345	si:dkey-89b17.4	98	41.369	ENSPNAG00000000750	znf646	99	40.000	Pygocentrus_nattereri
ENSGAFG00000000345	si:dkey-89b17.4	98	39.495	ENSSFOG00015004737	si:dkey-89b17.4	99	39.726	Scleropages_formosus
ENSGAFG00000000345	si:dkey-89b17.4	98	41.963	ENSSMAG00000012378	znf646	98	41.441	Scophthalmus_maximus
ENSGAFG00000000345	si:dkey-89b17.4	100	92.829	ENSSDUG00000015931	si:dkey-89b17.4	100	92.829	Seriola_dumerili
ENSGAFG00000000345	si:dkey-89b17.4	98	42.308	ENSSDUG00000002675	znf646	98	42.045	Seriola_dumerili
ENSGAFG00000000345	si:dkey-89b17.4	98	42.263	ENSSLDG00000018521	znf646	98	41.878	Seriola_lalandi_dorsalis
ENSGAFG00000000345	si:dkey-89b17.4	100	92.908	ENSSLDG00000012415	si:dkey-89b17.4	100	92.908	Seriola_lalandi_dorsalis
ENSGAFG00000000345	si:dkey-89b17.4	98	41.983	ENSSPAG00000016701	znf646	98	60.714	Stegastes_partitus
ENSGAFG00000000345	si:dkey-89b17.4	100	92.994	ENSSPAG00000018810	si:dkey-89b17.4	100	92.994	Stegastes_partitus
ENSGAFG00000000345	si:dkey-89b17.4	100	88.711	ENSTRUG00000020495	si:dkey-89b17.4	100	88.631	Takifugu_rubripes
ENSGAFG00000000345	si:dkey-89b17.4	98	40.758	ENSTRUG00000025597	znf646	98	40.397	Takifugu_rubripes
ENSGAFG00000000345	si:dkey-89b17.4	96	41.686	ENSTNIG00000000073	znf646	99	35.204	Tetraodon_nigroviridis
ENSGAFG00000000345	si:dkey-89b17.4	97	42.276	ENSTNIG00000001159	si:dkey-89b17.4	100	41.860	Tetraodon_nigroviridis
ENSGAFG00000000345	si:dkey-89b17.4	100	96.707	ENSXCOG00000001645	si:dkey-89b17.4	100	96.707	Xiphophorus_couchianus
ENSGAFG00000000345	si:dkey-89b17.4	97	41.237	ENSXCOG00000002714	-	94	41.237	Xiphophorus_couchianus
ENSGAFG00000000345	si:dkey-89b17.4	97	39.247	ENSXMAG00000018743	-	96	38.710	Xiphophorus_maculatus
ENSGAFG00000000345	si:dkey-89b17.4	100	99.438	ENSXMAG00000024528	si:dkey-89b17.4	100	99.438	Xiphophorus_maculatus