EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000000540 (Gene tree)
Gene ID: -
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1%2C nucleolar pre-rRNA processing protein%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6858 bases
Position: chrNHOQ01002483.1:45041-51898
Accession: ZDB-GENE-030131-4917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000723	NUC153	PF08159.12	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000730	-	3321	-	ENSGAFP00000000723	736 (aa)	-	-
ENSGAFT00000000745	-	605	-	ENSGAFP00000000738	194 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000540	esf1	90	67.568	ENSG00000089048	ESF1	80	61.680	Homo_sapiens
ENSGAFG00000000540	esf1	72	69.429	ENSAPOG00000003004	esf1	99	67.468	Acanthochromis_polyacanthus
ENSGAFG00000000540	esf1	90	68.056	ENSAMEG00000008830	ESF1	75	67.568	Ailuropoda_melanoleuca
ENSGAFG00000000540	esf1	99	69.262	ENSACIG00000018305	esf1	99	68.675	Amphilophus_citrinellus
ENSGAFG00000000540	esf1	99	64.706	ENSAOCG00000006033	esf1	99	68.972	Amphiprion_ocellaris
ENSGAFG00000000540	esf1	99	65.806	ENSAPEG00000022385	esf1	80	70.502	Amphiprion_percula
ENSGAFG00000000540	esf1	82	68.878	ENSATEG00000016321	esf1	77	70.192	Anabas_testudineus
ENSGAFG00000000540	esf1	92	58.621	ENSAPLG00000012113	ESF1	76	63.514	Anas_platyrhynchos
ENSGAFG00000000540	esf1	91	62.162	ENSACAG00000000963	ESF1	76	62.162	Anolis_carolinensis
ENSGAFG00000000540	esf1	91	67.568	ENSANAG00000036778	ESF1	75	67.568	Aotus_nancymaae
ENSGAFG00000000540	esf1	99	65.285	ENSACLG00000002972	esf1	79	70.443	Astatotilapia_calliptera
ENSGAFG00000000540	esf1	81	63.423	ENSAMXG00000001172	esf1	99	59.572	Astyanax_mexicanus
ENSGAFG00000000540	esf1	90	66.667	ENSBTAG00000007130	ESF1	74	66.216	Bos_taurus
ENSGAFG00000000540	esf1	90	67.568	ENSCJAG00000004640	ESF1	75	67.568	Callithrix_jacchus
ENSGAFG00000000540	esf1	90	66.667	ENSCAFG00000005587	ESF1	75	66.216	Canis_familiaris
ENSGAFG00000000540	esf1	90	66.667	ENSCAFG00020027530	ESF1	75	66.216	Canis_lupus_dingo
ENSGAFG00000000540	esf1	90	66.667	ENSCHIG00000021188	ESF1	76	66.216	Capra_hircus
ENSGAFG00000000540	esf1	90	66.667	ENSTSYG00000009956	ESF1	75	66.216	Carlito_syrichta
ENSGAFG00000000540	esf1	90	66.667	ENSCAPG00000010466	-	78	66.216	Cavia_aperea
ENSGAFG00000000540	esf1	99	48.925	ENSCAPG00000010333	-	99	48.178	Cavia_aperea
ENSGAFG00000000540	esf1	90	65.278	ENSCPOG00000014027	-	76	64.865	Cavia_porcellus
ENSGAFG00000000540	esf1	90	67.568	ENSCCAG00000024521	ESF1	75	67.568	Cebus_capucinus
ENSGAFG00000000540	esf1	90	69.444	ENSCATG00000042792	ESF1	74	68.919	Cercocebus_atys
ENSGAFG00000000540	esf1	98	68.056	ENSCLAG00000013266	-	76	67.568	Chinchilla_lanigera
ENSGAFG00000000540	esf1	90	69.444	ENSCSAG00000011777	ESF1	75	68.919	Chlorocebus_sabaeus
ENSGAFG00000000540	esf1	88	37.126	ENSCING00000020446	-	53	41.379	Ciona_intestinalis
ENSGAFG00000000540	esf1	99	37.216	ENSCSAVG00000009015	-	91	37.143	Ciona_savignyi
ENSGAFG00000000540	esf1	90	69.444	ENSCANG00000030674	ESF1	74	68.919	Colobus_angolensis_palliatus
ENSGAFG00000000540	esf1	90	66.667	ENSCGRG00001018257	Esf1	76	66.216	Cricetulus_griseus_chok1gshd
ENSGAFG00000000540	esf1	100	69.262	ENSCVAG00000007894	esf1	100	67.862	Cyprinodon_variegatus
ENSGAFG00000000540	esf1	99	55.852	ENSDARG00000008740	esf1	77	60.496	Danio_rerio
ENSGAFG00000000540	esf1	94	65.278	ENSDNOG00000019409	ESF1	74	64.865	Dasypus_novemcinctus
ENSGAFG00000000540	esf1	90	69.444	ENSDORG00000016313	Esf1	76	68.919	Dipodomys_ordii
ENSGAFG00000000540	esf1	91	38.759	FBgn0024364	CG11417	73	39.267	Drosophila_melanogaster
ENSGAFG00000000540	esf1	91	55.405	ENSEBUG00000015161	esf1	77	58.209	Eptatretus_burgeri
ENSGAFG00000000540	esf1	90	66.667	ENSEASG00005001777	ESF1	74	66.216	Equus_asinus_asinus
ENSGAFG00000000540	esf1	90	66.667	ENSECAG00000019188	ESF1	74	66.216	Equus_caballus
ENSGAFG00000000540	esf1	71	48.131	ENSEEUG00000015837	-	76	47.727	Erinaceus_europaeus
ENSGAFG00000000540	esf1	80	65.615	ENSELUG00000000408	esf1	74	64.686	Esox_lucius
ENSGAFG00000000540	esf1	90	67.606	ENSFCAG00000000919	ESF1	74	67.568	Felis_catus
ENSGAFG00000000540	esf1	90	64.789	ENSFALG00000010914	ESF1	75	64.865	Ficedula_albicollis
ENSGAFG00000000540	esf1	90	69.444	ENSFDAG00000014777	ESF1	77	68.919	Fukomys_damarensis
ENSGAFG00000000540	esf1	73	75.233	ENSFHEG00000014984	esf1	100	73.929	Fundulus_heteroclitus
ENSGAFG00000000540	esf1	95	56.397	ENSGALG00000034768	ESF1	75	64.865	Gallus_gallus
ENSGAFG00000000540	esf1	90	68.056	ENSGGOG00000006692	ESF1	74	67.568	Gorilla_gorilla
ENSGAFG00000000540	esf1	99	65.933	ENSHBUG00000001890	esf1	79	70.984	Haplochromis_burtoni
ENSGAFG00000000540	esf1	90	68.056	ENSHGLG00000011505	ESF1	77	67.568	Heterocephalus_glaber_female
ENSGAFG00000000540	esf1	90	68.056	ENSHGLG00100015045	ESF1	77	67.568	Heterocephalus_glaber_male
ENSGAFG00000000540	esf1	80	60.365	ENSIPUG00000006507	esf1	76	60.732	Ictalurus_punctatus
ENSGAFG00000000540	esf1	90	68.056	ENSSTOG00000009846	ESF1	76	67.568	Ictidomys_tridecemlineatus
ENSGAFG00000000540	esf1	90	68.056	ENSJJAG00000012570	Esf1	75	67.568	Jaculus_jaculus
ENSGAFG00000000540	esf1	90	66.667	ENSLACG00000016439	ESF1	74	66.667	Latimeria_chalumnae
ENSGAFG00000000540	esf1	96	62.833	ENSLOCG00000015979	esf1	83	63.514	Lepisosteus_oculatus
ENSGAFG00000000540	esf1	93	65.278	ENSLAFG00000005479	ESF1	80	64.865	Loxodonta_africana
ENSGAFG00000000540	esf1	90	69.444	ENSMFAG00000036841	ESF1	74	68.919	Macaca_fascicularis
ENSGAFG00000000540	esf1	90	69.444	ENSMNEG00000044042	ESF1	74	68.919	Macaca_nemestrina
ENSGAFG00000000540	esf1	90	68.056	ENSMLEG00000037121	ESF1	74	67.568	Mandrillus_leucophaeus
ENSGAFG00000000540	esf1	100	66.491	ENSMAMG00000018648	esf1	100	67.225	Mastacembelus_armatus
ENSGAFG00000000540	esf1	72	68.284	ENSMZEG00005013912	esf1	99	67.161	Maylandia_zebra
ENSGAFG00000000540	esf1	99	60.000	ENSMGAG00000004291	ESF1	76	64.865	Meleagris_gallopavo
ENSGAFG00000000540	esf1	90	68.056	ENSMAUG00000015975	Esf1	75	67.568	Mesocricetus_auratus
ENSGAFG00000000540	esf1	90	68.056	ENSMICG00000010711	ESF1	74	67.568	Microcebus_murinus
ENSGAFG00000000540	esf1	90	69.444	ENSMOCG00000005902	Esf1	76	68.919	Microtus_ochrogaster
ENSGAFG00000000540	esf1	73	70.686	ENSMMOG00000018693	esf1	100	69.944	Mola_mola
ENSGAFG00000000540	esf1	91	62.162	ENSMODG00000005066	ESF1	77	62.162	Monodelphis_domestica
ENSGAFG00000000540	esf1	89	63.104	ENSMALG00000007338	esf1	73	65.591	Monopterus_albus
ENSGAFG00000000540	esf1	99	68.056	MGP_CAROLIEiJ_G0024365	Esf1	75	67.568	Mus_caroli
ENSGAFG00000000540	esf1	81	56.397	ENSMUSG00000045624	Esf1	66	55.537	Mus_musculus
ENSGAFG00000000540	esf1	92	68.056	MGP_PahariEiJ_G0025810	Esf1	75	67.568	Mus_pahari
ENSGAFG00000000540	esf1	90	69.444	MGP_SPRETEiJ_G0025285	Esf1	75	68.919	Mus_spretus
ENSGAFG00000000540	esf1	90	68.056	ENSMPUG00000001450	ESF1	75	67.568	Mustela_putorius_furo
ENSGAFG00000000540	esf1	90	68.056	ENSMLUG00000013080	ESF1	75	67.568	Myotis_lucifugus
ENSGAFG00000000540	esf1	90	68.056	ENSNLEG00000014563	ESF1	74	67.568	Nomascus_leucogenys
ENSGAFG00000000540	esf1	74	52.390	ENSOPRG00000004862	ESF1	99	51.838	Ochotona_princeps
ENSGAFG00000000540	esf1	96	66.667	ENSODEG00000006824	ESF1	78	66.216	Octodon_degus
ENSGAFG00000000540	esf1	100	65.593	ENSONIG00000006804	esf1	83	72.973	Oreochromis_niloticus
ENSGAFG00000000540	esf1	90	62.162	ENSOANG00000008432	-	75	62.162	Ornithorhynchus_anatinus
ENSGAFG00000000540	esf1	90	68.056	ENSOCUG00000005414	ESF1	76	67.568	Oryctolagus_cuniculus
ENSGAFG00000000540	esf1	73	64.325	ENSORLG00000018625	esf1	100	62.591	Oryzias_latipes
ENSGAFG00000000540	esf1	100	64.840	ENSORLG00015022826	esf1	100	63.989	Oryzias_latipes_hsok
ENSGAFG00000000540	esf1	72	68.015	ENSOMEG00000009311	esf1	99	67.222	Oryzias_melastigma
ENSGAFG00000000540	esf1	91	65.278	ENSOGAG00000016912	ESF1	77	64.865	Otolemur_garnettii
ENSGAFG00000000540	esf1	90	66.667	ENSOARG00000011158	ESF1	72	66.216	Ovis_aries
ENSGAFG00000000540	esf1	90	68.056	ENSPPAG00000024379	ESF1	75	67.568	Pan_paniscus
ENSGAFG00000000540	esf1	90	67.606	ENSPPRG00000012007	ESF1	75	67.568	Panthera_pardus
ENSGAFG00000000540	esf1	90	67.606	ENSPTIG00000020063	ESF1	75	67.568	Panthera_tigris_altaica
ENSGAFG00000000540	esf1	90	68.056	ENSPTRG00000013258	ESF1	74	67.568	Pan_troglodytes
ENSGAFG00000000540	esf1	90	64.286	ENSPCIG00000019331	ESF1	77	65.714	Phascolarctos_cinereus
ENSGAFG00000000540	esf1	100	79.723	ENSPFOG00000010101	esf1	80	87.993	Poecilia_formosa
ENSGAFG00000000540	esf1	73	85.581	ENSPLAG00000006452	esf1	100	82.772	Poecilia_latipinna
ENSGAFG00000000540	esf1	100	89.362	ENSPMEG00000000713	esf1	100	86.267	Poecilia_mexicana
ENSGAFG00000000540	esf1	100	86.887	ENSPREG00000004431	esf1	98	85.790	Poecilia_reticulata
ENSGAFG00000000540	esf1	90	68.056	ENSPPYG00000010715	ESF1	74	67.568	Pongo_abelii
ENSGAFG00000000540	esf1	90	62.500	ENSPCAG00000006881	ESF1	73	62.162	Procavia_capensis
ENSGAFG00000000540	esf1	90	66.667	ENSPVAG00000001295	ESF1	75	66.216	Pteropus_vampyrus
ENSGAFG00000000540	esf1	99	65.576	ENSPNYG00000015735	esf1	80	70.984	Pundamilia_nyererei
ENSGAFG00000000540	esf1	80	63.211	ENSPNAG00000014721	esf1	84	64.865	Pygocentrus_nattereri
ENSGAFG00000000540	esf1	90	68.056	ENSRNOG00000004777	Esf1	75	67.568	Rattus_norvegicus
ENSGAFG00000000540	esf1	90	69.444	ENSRBIG00000035763	ESF1	75	68.919	Rhinopithecus_bieti
ENSGAFG00000000540	esf1	90	69.444	ENSRROG00000032022	ESF1	74	68.919	Rhinopithecus_roxellana
ENSGAFG00000000540	esf1	90	68.056	ENSSBOG00000030387	ESF1	75	67.568	Saimiri_boliviensis_boliviensis
ENSGAFG00000000540	esf1	90	63.889	ENSSHAG00000000449	ESF1	80	63.514	Sarcophilus_harrisii
ENSGAFG00000000540	esf1	100	67.919	ENSSDUG00000019460	esf1	100	66.445	Seriola_dumerili
ENSGAFG00000000540	esf1	93	64.865	ENSSPUG00000012635	ESF1	79	64.865	Sphenodon_punctatus
ENSGAFG00000000540	esf1	99	66.282	ENSSPAG00000019077	esf1	79	70.880	Stegastes_partitus
ENSGAFG00000000540	esf1	90	68.493	ENSSSCG00000007077	ESF1	73	68.919	Sus_scrofa
ENSGAFG00000000540	esf1	90	63.889	ENSTGUG00000002450	ESF1	74	63.514	Taeniopygia_guttata
ENSGAFG00000000540	esf1	99	60.875	ENSTRUG00000009445	esf1	79	64.570	Takifugu_rubripes
ENSGAFG00000000540	esf1	63	59.431	ENSTBEG00000008552	ESF1	52	57.295	Tupaia_belangeri
ENSGAFG00000000540	esf1	90	65.278	ENSTTRG00000005335	ESF1	74	64.865	Tursiops_truncatus
ENSGAFG00000000540	esf1	90	66.667	ENSUMAG00000008579	ESF1	75	66.216	Ursus_maritimus
ENSGAFG00000000540	esf1	80	67.470	ENSVPAG00000005291	ESF1	67	66.797	Vicugna_pacos
ENSGAFG00000000540	esf1	90	65.278	ENSVVUG00000014318	ESF1	69	64.865	Vulpes_vulpes
ENSGAFG00000000540	esf1	90	58.108	ENSXETG00000008079	esf1	79	58.108	Xenopus_tropicalis
ENSGAFG00000000540	esf1	100	76.601	ENSXMAG00000017651	esf1	100	74.902	Xiphophorus_maculatus