EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2984 bases
Position: chrNHOQ01000064.1:943969-946952
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000733	zf-C2H2	PF00096.26	1.2e-18	1	3
ENSGAFP00000000733	zf-C2H2	PF00096.26	1.2e-18	2	3
ENSGAFP00000000733	zf-C2H2	PF00096.26	1.2e-18	3	3
ENSGAFP00000000733	zf-met	PF12874.7	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000741	-	2173	-	ENSGAFP00000000733	278 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000549	-	98	35.398	ENSGAFG00000020501	-	98	34.091
ENSGAFG00000000549	-	58	40.845	ENSGAFG00000020505	-	58	40.385
ENSGAFG00000000549	-	98	37.647	ENSGAFG00000010983	-	97	37.647
ENSGAFG00000000549	-	72	37.349	ENSGAFG00000014188	-	71	36.585
ENSGAFG00000000549	-	68	42.683	ENSGAFG00000019035	-	56	42.683
ENSGAFG00000000549	-	93	38.095	ENSGAFG00000012934	-	89	38.095
ENSGAFG00000000549	-	73	37.500	ENSGAFG00000014097	-	89	37.500
ENSGAFG00000000549	-	98	40.909	ENSGAFG00000008274	-	97	40.909
ENSGAFG00000000549	-	96	40.909	ENSGAFG00000018422	-	94	40.909
ENSGAFG00000000549	-	98	37.079	ENSGAFG00000004319	-	98	37.079
ENSGAFG00000000549	-	50	44.444	ENSGAFG00000018820	-	80	44.444
ENSGAFG00000000549	-	78	40.909	ENSGAFG00000007110	-	82	40.909
ENSGAFG00000000549	-	70	42.045	ENSGAFG00000011884	-	50	38.372
ENSGAFG00000000549	-	99	43.182	ENSGAFG00000008226	-	98	43.182
ENSGAFG00000000549	-	72	36.364	ENSGAFG00000013457	-	83	36.364
ENSGAFG00000000549	-	96	32.184	ENSGAFG00000000521	-	81	32.184
ENSGAFG00000000549	-	98	38.636	ENSGAFG00000013934	-	97	38.636
ENSGAFG00000000549	-	96	31.098	ENSGAFG00000013366	-	99	31.098
ENSGAFG00000000549	-	98	38.372	ENSGAFG00000008204	-	96	38.372
ENSGAFG00000000549	-	82	40.351	ENSGAFG00000018663	-	95	40.351
ENSGAFG00000000549	-	98	42.857	ENSGAFG00000017066	-	79	42.857
ENSGAFG00000000549	-	99	42.045	ENSGAFG00000008231	-	100	42.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000549	-	98	40.909	ENSAPOG00000021966	-	99	40.909	Acanthochromis_polyacanthus
ENSGAFG00000000549	-	99	66.207	ENSAOCG00000001971	-	100	66.207	Amphiprion_ocellaris
ENSGAFG00000000549	-	98	39.130	ENSAOCG00000020652	-	100	39.130	Amphiprion_ocellaris
ENSGAFG00000000549	-	98	40.909	ENSAOCG00000022529	-	99	40.909	Amphiprion_ocellaris
ENSGAFG00000000549	-	99	66.207	ENSAPEG00000011156	-	86	66.207	Amphiprion_percula
ENSGAFG00000000549	-	59	36.364	ENSATEG00000014684	-	95	53.448	Anabas_testudineus
ENSGAFG00000000549	-	61	40.449	ENSACLG00000005795	-	84	40.449	Astatotilapia_calliptera
ENSGAFG00000000549	-	98	38.636	ENSACLG00000008374	-	92	38.636	Astatotilapia_calliptera
ENSGAFG00000000549	-	99	74.048	ENSCVAG00000000161	-	99	74.048	Cyprinodon_variegatus
ENSGAFG00000000549	-	100	69.550	ENSFHEG00000003856	-	99	69.550	Fundulus_heteroclitus
ENSGAFG00000000549	-	73	34.434	ENSHBUG00000013065	-	82	34.434	Haplochromis_burtoni
ENSGAFG00000000549	-	98	38.636	ENSHBUG00000017924	-	92	38.636	Haplochromis_burtoni
ENSGAFG00000000549	-	98	36.905	ENSHCOG00000020309	-	97	36.905	Hippocampus_comes
ENSGAFG00000000549	-	99	38.202	ENSLBEG00000008850	-	99	38.202	Labrus_bergylta
ENSGAFG00000000549	-	73	34.434	ENSMZEG00005011812	-	82	34.434	Maylandia_zebra
ENSGAFG00000000549	-	98	38.636	ENSMZEG00005011431	-	92	38.636	Maylandia_zebra
ENSGAFG00000000549	-	97	42.045	ENSMALG00000005696	-	99	42.045	Monopterus_albus
ENSGAFG00000000549	-	100	62.199	ENSMALG00000012840	-	100	62.199	Monopterus_albus
ENSGAFG00000000549	-	98	38.636	ENSNBRG00000004792	-	92	38.636	Neolamprologus_brichardi
ENSGAFG00000000549	-	98	44.068	ENSPMGG00000001672	-	93	44.068	Periophthalmus_magnuspinnatus
ENSGAFG00000000549	-	99	34.091	ENSPMGG00000011591	-	99	34.091	Periophthalmus_magnuspinnatus
ENSGAFG00000000549	-	100	91.727	ENSPMEG00000004752	-	100	91.727	Poecilia_mexicana
ENSGAFG00000000549	-	98	38.636	ENSPNYG00000016157	-	92	38.636	Pundamilia_nyererei
ENSGAFG00000000549	-	61	39.326	ENSPNYG00000011024	-	84	39.326	Pundamilia_nyererei
ENSGAFG00000000549	-	98	34.524	ENSPNAG00000011705	-	91	34.524	Pygocentrus_nattereri
ENSGAFG00000000549	-	98	44.048	ENSSMAG00000006902	-	99	44.048	Scophthalmus_maximus
ENSGAFG00000000549	-	98	44.048	ENSSMAG00000006155	-	97	44.048	Scophthalmus_maximus
ENSGAFG00000000549	-	60	47.297	ENSSMAG00000013663	-	76	44.262	Scophthalmus_maximus
ENSGAFG00000000549	-	98	39.773	ENSSDUG00000022035	-	100	39.773	Seriola_dumerili
ENSGAFG00000000549	-	98	39.773	ENSSLDG00000025676	-	100	39.773	Seriola_lalandi_dorsalis
ENSGAFG00000000549	-	99	51.429	ENSTRUG00000021167	-	99	51.786	Takifugu_rubripes
ENSGAFG00000000549	-	100	96.403	ENSXMAG00000028660	-	100	96.403	Xiphophorus_maculatus