EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4527 bases
Position: chrNHOQ01001678.1:689483-694009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000823	RRM_1	PF00076.22	2.1e-33	1	2
ENSGAFP00000000823	RRM_1	PF00076.22	2.1e-33	2	2
ENSGAFP00000000831	RRM_1	PF00076.22	5.6e-33	1	2
ENSGAFP00000000831	RRM_1	PF00076.22	5.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000831	-	2235	-	ENSGAFP00000000823	250 (aa)	-	UPI000DD2A976
ENSGAFT00000000839	-	1707	-	ENSGAFP00000000831	322 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000609	-	68	37.427	ENSGAFG00000018237	srsf5a	51	36.782
ENSGAFG00000000609	-	74	65.761	ENSGAFG00000009123	srsf9	83	66.848
ENSGAFG00000000609	-	79	85.787	ENSGAFG00000012721	-	79	85.572
ENSGAFG00000000609	-	66	50.289	ENSGAFG00000002865	srsf5b	55	48.023
ENSGAFG00000000609	-	86	35.135	ENSGAFG00000018496	srsf4	60	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000609	-	75	91.489	ENSACIG00000002623	-	96	91.489	Amphilophus_citrinellus
ENSGAFG00000000609	-	79	85.279	ENSACLG00000005676	-	79	85.075	Astatotilapia_calliptera
ENSGAFG00000000609	-	93	93.220	ENSACLG00000021693	-	93	92.032	Astatotilapia_calliptera
ENSGAFG00000000609	-	76	63.918	WBGene00004700	rsp-3	75	63.402	Caenorhabditis_elegans
ENSGAFG00000000609	-	75	71.123	ENSCING00000007375	-	77	69.110	Ciona_intestinalis
ENSGAFG00000000609	-	55	62.411	ENSCING00000000257	-	77	62.676	Ciona_intestinalis
ENSGAFG00000000609	-	75	70.053	ENSCSAVG00000006093	-	93	68.063	Ciona_savignyi
ENSGAFG00000000609	-	71	54.494	ENSCSAVG00000003567	-	79	59.712	Ciona_savignyi
ENSGAFG00000000609	-	75	68.449	FBgn0283477	SF2	73	68.449	Drosophila_melanogaster
ENSGAFG00000000609	-	98	71.138	ENSEBUG00000009582	-	85	74.510	Eptatretus_burgeri
ENSGAFG00000000609	-	99	97.984	ENSFHEG00000017425	-	100	97.984	Fundulus_heteroclitus
ENSGAFG00000000609	-	75	85.638	ENSGMOG00000010606	-	97	85.638	Gadus_morhua
ENSGAFG00000000609	-	74	85.405	ENSGACG00000011094	-	96	85.405	Gasterosteus_aculeatus
ENSGAFG00000000609	-	52	59.690	ENSHBUG00000015600	-	93	59.231	Haplochromis_burtoni
ENSGAFG00000000609	-	93	93.617	ENSHBUG00000015576	-	82	90.777	Haplochromis_burtoni
ENSGAFG00000000609	-	80	80.693	ENSHCOG00000008016	-	79	80.488	Hippocampus_comes
ENSGAFG00000000609	-	98	81.526	ENSMFAG00000034223	-	66	85.149	Macaca_fascicularis
ENSGAFG00000000609	-	93	94.017	ENSMZEG00005019071	-	99	92.063	Maylandia_zebra
ENSGAFG00000000609	-	79	85.279	ENSMZEG00005007947	-	79	85.075	Maylandia_zebra
ENSGAFG00000000609	-	80	89.000	ENSMMOG00000018849	-	81	88.725	Mola_mola
ENSGAFG00000000609	-	79	85.279	ENSNBRG00000019981	-	79	85.075	Neolamprologus_brichardi
ENSGAFG00000000609	-	93	93.220	ENSNBRG00000008134	-	79	93.237	Neolamprologus_brichardi
ENSGAFG00000000609	-	68	64.118	ENSOPRG00000004745	-	96	64.118	Ochotona_princeps
ENSGAFG00000000609	-	80	94.118	ENSONIG00000004857	-	82	93.269	Oreochromis_niloticus
ENSGAFG00000000609	-	53	86.029	ENSOANG00000007320	-	55	94.382	Ornithorhynchus_anatinus
ENSGAFG00000000609	-	71	50.282	ENSOCUG00000026856	-	96	50.279	Oryctolagus_cuniculus
ENSGAFG00000000609	-	80	93.500	ENSORLG00000005314	-	100	91.373	Oryzias_latipes
ENSGAFG00000000609	-	80	93.500	ENSORLG00015015497	-	100	90.980	Oryzias_latipes_hsok
ENSGAFG00000000609	-	80	95.025	ENSOMEG00000017711	-	100	92.188	Oryzias_melastigma
ENSGAFG00000000609	-	90	69.710	ENSPLAG00000019613	-	71	85.405	Poecilia_latipinna
ENSGAFG00000000609	-	79	84.000	ENSPLAG00000019553	-	91	85.027	Poecilia_latipinna
ENSGAFG00000000609	-	100	99.200	ENSPREG00000016792	-	100	99.200	Poecilia_reticulata
ENSGAFG00000000609	-	79	85.279	ENSPNYG00000017115	-	79	85.075	Pundamilia_nyererei
ENSGAFG00000000609	-	93	93.220	ENSPNYG00000020651	-	93	92.032	Pundamilia_nyererei
ENSGAFG00000000609	-	84	87.204	ENSSFOG00015004989	-	72	87.129	Scleropages_formosus
ENSGAFG00000000609	-	99	81.538	ENSSDUG00000003887	-	81	88.208	Seriola_dumerili
ENSGAFG00000000609	-	80	84.000	ENSTRUG00000017058	-	82	84.314	Takifugu_rubripes
ENSGAFG00000000609	-	80	81.095	ENSTNIG00000009993	-	82	81.463	Tetraodon_nigroviridis
ENSGAFG00000000609	-	100	99.600	ENSXCOG00000017888	-	99	99.600	Xiphophorus_couchianus
ENSGAFG00000000609	-	79	84.000	ENSXCOG00000009643	-	79	85.279	Xiphophorus_couchianus
ENSGAFG00000000609	-	100	99.600	ENSXMAG00000010797	-	100	99.600	Xiphophorus_maculatus