EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000619 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 7474 bases
Position: chrNHOQ01001229.1:17152821-17160294
Accession: ZDB-GENE-050419-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000000848	zf-C2H2	PF00096.26	3.6e-12	1	3
ENSGAFP00000000848	zf-C2H2	PF00096.26	3.6e-12	2	3
ENSGAFP00000000848	zf-C2H2	PF00096.26	3.6e-12	3	3
ENSGAFP00000000860	zf-C2H2	PF00096.26	3.6e-12	1	3
ENSGAFP00000000860	zf-C2H2	PF00096.26	3.6e-12	2	3
ENSGAFP00000000860	zf-C2H2	PF00096.26	3.6e-12	3	3
ENSGAFP00000000848	zf-met	PF12874.7	4.5e-05	1	1
ENSGAFP00000000860	zf-met	PF12874.7	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000000856	-	4973	-	ENSGAFP00000000848	575 (aa)	-	-
ENSGAFT00000000868	-	2357	-	ENSGAFP00000000860	575 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000619	zbtb18	95	34.437	ENSGAFG00000005321	zbtb47b	75	35.616
ENSGAFG00000000619	zbtb18	51	41.026	ENSGAFG00000010259	zbtb16a	55	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000619	zbtb18	99	92.374	ENSAPOG00000005168	zbtb18	99	91.854	Acanthochromis_polyacanthus
ENSGAFG00000000619	zbtb18	99	82.837	ENSACIG00000008655	zbtb18	99	82.662	Amphilophus_citrinellus
ENSGAFG00000000619	zbtb18	99	92.548	ENSAOCG00000014105	zbtb18	99	92.028	Amphiprion_ocellaris
ENSGAFG00000000619	zbtb18	99	91.724	ENSAPEG00000003817	zbtb18	79	91.552	Amphiprion_percula
ENSGAFG00000000619	zbtb18	99	91.812	ENSATEG00000010192	zbtb18	99	91.812	Anabas_testudineus
ENSGAFG00000000619	zbtb18	99	91.319	ENSACLG00000022978	zbtb18	98	91.319	Astatotilapia_calliptera
ENSGAFG00000000619	zbtb18	100	72.743	ENSAMXG00000042119	zbtb18	100	72.743	Astyanax_mexicanus
ENSGAFG00000000619	zbtb18	99	88.850	ENSCSEG00000003083	zbtb18	99	88.850	Cynoglossus_semilaevis
ENSGAFG00000000619	zbtb18	100	94.464	ENSCVAG00000016785	zbtb18	100	94.464	Cyprinodon_variegatus
ENSGAFG00000000619	zbtb18	98	70.415	ENSDARG00000028228	zbtb18	100	72.837	Danio_rerio
ENSGAFG00000000619	zbtb18	99	75.433	ENSELUG00000013471	zbtb18	99	75.433	Esox_lucius
ENSGAFG00000000619	zbtb18	99	95.312	ENSFHEG00000020005	zbtb18	99	95.312	Fundulus_heteroclitus
ENSGAFG00000000619	zbtb18	56	94.656	ENSGMOG00000018718	zbtb18	58	91.192	Gadus_morhua
ENSGAFG00000000619	zbtb18	99	87.215	ENSGACG00000010518	zbtb18	96	87.741	Gasterosteus_aculeatus
ENSGAFG00000000619	zbtb18	99	91.812	ENSHBUG00000013654	zbtb18	99	91.812	Haplochromis_burtoni
ENSGAFG00000000619	zbtb18	55	87.903	ENSHCOG00000002345	zbtb18	94	87.903	Hippocampus_comes
ENSGAFG00000000619	zbtb18	100	65.588	ENSIPUG00000008912	zbtb18	100	65.758	Ictalurus_punctatus
ENSGAFG00000000619	zbtb18	100	93.426	ENSKMAG00000002780	zbtb18	100	93.426	Kryptolebias_marmoratus
ENSGAFG00000000619	zbtb18	99	89.895	ENSLBEG00000014796	zbtb18	99	89.895	Labrus_bergylta
ENSGAFG00000000619	zbtb18	84	58.400	ENSMFAG00000033326	ZBTB18	99	58.400	Macaca_fascicularis
ENSGAFG00000000619	zbtb18	84	58.517	ENSMMUG00000015664	ZBTB18	100	58.502	Macaca_mulatta
ENSGAFG00000000619	zbtb18	99	91.986	ENSMAMG00000021720	zbtb18	99	91.986	Mastacembelus_armatus
ENSGAFG00000000619	zbtb18	99	91.812	ENSMZEG00005027394	zbtb18	99	91.812	Maylandia_zebra
ENSGAFG00000000619	zbtb18	94	50.741	ENSMGAG00000015389	-	100	51.296	Meleagris_gallopavo
ENSGAFG00000000619	zbtb18	98	83.951	ENSMMOG00000007888	zbtb18	99	83.951	Mola_mola
ENSGAFG00000000619	zbtb18	99	90.592	ENSMALG00000000725	zbtb18	99	90.592	Monopterus_albus
ENSGAFG00000000619	zbtb18	98	91.873	ENSNBRG00000013796	zbtb18	100	91.873	Neolamprologus_brichardi
ENSGAFG00000000619	zbtb18	99	92.160	ENSONIG00000000862	zbtb18	99	92.160	Oreochromis_niloticus
ENSGAFG00000000619	zbtb18	99	91.319	ENSORLG00000027425	zbtb18	98	91.319	Oryzias_latipes
ENSGAFG00000000619	zbtb18	99	91.493	ENSORLG00020011988	zbtb18	98	91.493	Oryzias_latipes_hni
ENSGAFG00000000619	zbtb18	99	91.681	ENSORLG00015017457	zbtb18	98	91.493	Oryzias_latipes_hsok
ENSGAFG00000000619	zbtb18	99	91.493	ENSOMEG00000011249	zbtb18	98	91.493	Oryzias_melastigma
ENSGAFG00000000619	zbtb18	98	54.688	ENSPKIG00000008787	-	100	54.688	Paramormyrops_kingsleyae
ENSGAFG00000000619	zbtb18	99	69.655	ENSPKIG00000021964	zbtb18	96	70.137	Paramormyrops_kingsleyae
ENSGAFG00000000619	zbtb18	98	80.885	ENSPMGG00000008020	zbtb18	100	80.885	Periophthalmus_magnuspinnatus
ENSGAFG00000000619	zbtb18	98	97.691	ENSPFOG00000022080	zbtb18	100	97.691	Poecilia_formosa
ENSGAFG00000000619	zbtb18	98	91.829	ENSPLAG00000011299	-	100	91.829	Poecilia_latipinna
ENSGAFG00000000619	zbtb18	98	91.829	ENSPLAG00000020960	zbtb18	100	91.829	Poecilia_latipinna
ENSGAFG00000000619	zbtb18	98	98.579	ENSPMEG00000007554	zbtb18	100	98.579	Poecilia_mexicana
ENSGAFG00000000619	zbtb18	100	98.609	ENSPREG00000008576	zbtb18	100	98.609	Poecilia_reticulata
ENSGAFG00000000619	zbtb18	99	91.812	ENSPNYG00000001530	zbtb18	99	91.812	Pundamilia_nyererei
ENSGAFG00000000619	zbtb18	86	71.176	ENSPNAG00000014066	zbtb18	87	71.176	Pygocentrus_nattereri
ENSGAFG00000000619	zbtb18	98	89.753	ENSSMAG00000018041	zbtb18	100	89.753	Scophthalmus_maximus
ENSGAFG00000000619	zbtb18	98	93.110	ENSSDUG00000018660	zbtb18	100	93.110	Seriola_dumerili
ENSGAFG00000000619	zbtb18	98	92.933	ENSSLDG00000022573	zbtb18	100	92.933	Seriola_lalandi_dorsalis
ENSGAFG00000000619	zbtb18	94	49.174	ENSSPUG00000010554	-	100	50.366	Sphenodon_punctatus
ENSGAFG00000000619	zbtb18	99	92.334	ENSSPAG00000002691	zbtb18	99	92.334	Stegastes_partitus
ENSGAFG00000000619	zbtb18	98	90.283	ENSTRUG00000020604	zbtb18	100	90.283	Takifugu_rubripes
ENSGAFG00000000619	zbtb18	99	83.624	ENSTNIG00000000430	zbtb18	99	84.321	Tetraodon_nigroviridis
ENSGAFG00000000619	zbtb18	98	92.540	ENSXCOG00000013308	zbtb18	100	92.540	Xiphophorus_couchianus
ENSGAFG00000000619	zbtb18	99	88.204	ENSXMAG00000018241	zbtb18	99	88.204	Xiphophorus_maculatus