EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000000884 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
9650 bases
Position
chrNHOQ01002357.1:4392520-4402169
Accession
ZDB-GENE-031118-30
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000001258MMR_HSR1PF01926.237.4e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000001274-2458-ENSGAFP00000001258220 (aa)-UPI0002939A04
Gene Model
Click here to download ENSGAFG00000000884's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000884's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000000884rab5c7942.697ENSGAFG00000021688-9939.320
ENSGAFG00000000884rab5c7745.977ENSGAFG00000021724rab25b8146.746
ENSGAFG00000000884rab5c7149.045ENSGAFG00000021725rab11al7349.045
ENSGAFG00000000884rab5c7841.860ENSGAFG00000005477rab4a7643.478
ENSGAFG00000000884rab5c6636.424ENSGAFG00000015249-6335.762
ENSGAFG00000000884rab5c8840.816ENSGAFG00000010916rab6bb8442.286
ENSGAFG00000000884rab5c9032.710ENSGAFG00000008183si:dkey-34d22.57536.747
ENSGAFG00000000884rab5c8935.909ENSGAFG00000019659rab33ba8535.610
ENSGAFG00000000884rab5c9141.294ENSGAFG00000008560rab18b9541.294
ENSGAFG00000000884rab5c8543.158ENSGAFG00000015702zgc:1719276545.399
ENSGAFG00000000884rab5c8141.111ENSGAFG00000002790rab18a8043.030
ENSGAFG00000000884rab5c8944.615ENSGAFG00000000918-9644.615
ENSGAFG00000000884rab5c8040.113ENSGAFG00000014787-8143.478
ENSGAFG00000000884rab5c8941.176ENSGAFG00000016549rab11a9341.584
ENSGAFG00000000884rab5c7133.125ENSGAFG00000012579rab34a6033.125
ENSGAFG00000000884rab5c9340.000ENSGAFG00000017270rab6ba9940.000
ENSGAFG00000000884rab5c8130.000ENSGAFG00000010541rras8132.298
ENSGAFG00000000884rab5c7337.952ENSGAFG00000015490rab33a6536.464
ENSGAFG00000000884rab5c8936.816ENSGAFG00000005388si:dkey-16l2.169635.323
ENSGAFG00000000884rab5c5530.645ENSGAFG00000010938arl8ba6430.645
ENSGAFG00000000884rab5c7238.365ENSGAFG00000017305RAB158341.463
ENSGAFG00000000884rab5c8739.896ENSGAFG00000014730-9339.896
ENSGAFG00000000884rab5c7539.766ENSGAFG00000021202zgc:1015597339.766
ENSGAFG00000000884rab5c8940.099ENSGAFG00000020309rab309440.299
ENSGAFG00000000884rab5c8945.000ENSGAFG00000001289rab1ab8047.239
ENSGAFG00000000884rab5c7235.443ENSGAFG00000007684rab237437.500
ENSGAFG00000000884rab5c7534.337ENSGAFG00000021765kras9033.333
ENSGAFG00000000884rab5c7535.838ENSGAFG00000018916-7934.921
ENSGAFG00000000884rab5c9334.272ENSGAFG00000004099rab9b9233.333
ENSGAFG00000000884rab5c7943.103ENSGAFG00000019872rab418243.103
ENSGAFG00000000884rab5c5531.452ENSGAFG00000008497arl8bb6331.452
ENSGAFG00000000884rab5c7446.626ENSGAFG00000005679rab11ba7546.626
ENSGAFG00000000884rab5c7031.818ENSGAFG00000020906rheb8432.468
ENSGAFG00000000884rab5c7644.311ENSGAFG00000006356rab6a8044.311
ENSGAFG00000000884rab5c7438.415ENSGAFG00000002141rab42a7538.415
ENSGAFG00000000884rab5c7842.614ENSGAFG00000020476RAB7A9938.835
ENSGAFG00000000884rab5c7339.130ENSGAFG00000002756rab157639.130
ENSGAFG00000000884rab5c8931.905ENSGAFG00000000629RAB299731.841
ENSGAFG00000000884rab5c5530.400ENSGAFG00000017776arl8a6930.400
ENSGAFG00000000884rab5c7135.625ENSGAFG00000015135rab366235.625
ENSGAFG00000000884rab5c7447.239ENSGAFG00000007102rab11bb7547.239
ENSGAFG00000000884rab5c7453.374ENSGAFG00000001301rab22a8453.374
ENSGAFG00000000884rab5c8930.457ENSGAFG00000021814hrasb9530.457
ENSGAFG00000000884rab5c9590.909ENSGAFG00000003642-9988.739
ENSGAFG00000000884rab5c7235.583ENSGAFG00000020102si:dkey-13a21.47935.583
ENSGAFG00000000884rab5c7038.562ENSGAFG00000005188rabl26738.562
ENSGAFG00000000884rab5c7337.349ENSGAFG00000000591rab9a7637.349
ENSGAFG00000000884rab5c9039.706ENSGAFG00000006846rab2a7644.099
ENSGAFG00000000884rab5c7537.349ENSGAFG00000004604RAB39B7737.805
ENSGAFG00000000884rab5c8944.660ENSGAFG00000011713rab25a8153.731
ENSGAFG00000000884rab5c7437.805ENSGAFG00000006932-7737.805
ENSGAFG00000000884rab5c8942.929ENSGAFG00000019305rab1ba8146.626
ENSGAFG00000000884rab5c9884.722ENSGAFG00000011619rab5aa9983.796
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000000884rab5c9891.204ENSG00000108774RAB5C10095.604Homo_sapiens
ENSGAFG00000000884rab5c10095.909ENSAPOG00000016864rab5c10095.909Acanthochromis_polyacanthus
ENSGAFG00000000884rab5c9891.204ENSAMEG00000006003RAB5C9989.815Ailuropoda_melanoleuca
ENSGAFG00000000884rab5c10096.818ENSACIG00000010896rab5c10096.818Amphilophus_citrinellus
ENSGAFG00000000884rab5c10095.909ENSAOCG00000016614rab5c10095.909Amphiprion_ocellaris
ENSGAFG00000000884rab5c9895.370ENSAPEG00000017868-9995.814Amphiprion_percula
ENSGAFG00000000884rab5c9997.235ENSATEG00000001937rab5c9997.235Anabas_testudineus
ENSGAFG00000000884rab5c9393.171ENSANAG00000025390RAB5C10091.220Aotus_nancymaae
ENSGAFG00000000884rab5c10095.455ENSACLG00000002706rab5c10095.455Astatotilapia_calliptera
ENSGAFG00000000884rab5c9689.623ENSACLG00000008615-10088.288Astatotilapia_calliptera
ENSGAFG00000000884rab5c9591.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSGAFG00000000884rab5c10097.738ENSAMXG00000043717rab5c10097.738Astyanax_mexicanus
ENSGAFG00000000884rab5c9891.204ENSBTAG00000006982RAB5C9989.352Bos_taurus
ENSGAFG00000000884rab5c9874.312WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSGAFG00000000884rab5c9891.204ENSCAFG00000015629RAB5C9989.815Canis_familiaris
ENSGAFG00000000884rab5c9891.204ENSCAFG00020013537RAB5C9989.815Canis_lupus_dingo
ENSGAFG00000000884rab5c9891.204ENSCHIG00000012960RAB5C9989.352Capra_hircus
ENSGAFG00000000884rab5c9891.667ENSTSYG00000030531RAB5C9989.815Carlito_syrichta
ENSGAFG00000000884rab5c9891.204ENSCCAG00000025940RAB5C9989.352Cebus_capucinus
ENSGAFG00000000884rab5c9891.204ENSCATG00000040873RAB5C9989.815Cercocebus_atys
ENSGAFG00000000884rab5c9891.204ENSCLAG00000016650RAB5C9989.352Chinchilla_lanigera
ENSGAFG00000000884rab5c8195.506ENSCHOG00000009886RAB5C10095.506Choloepus_hoffmanni
ENSGAFG00000000884rab5c10074.545ENSCING00000003340-10074.091Ciona_intestinalis
ENSGAFG00000000884rab5c9975.446ENSCSAVG00000000613-9983.333Ciona_savignyi
ENSGAFG00000000884rab5c9891.204ENSCGRG00001014226Rab5c9989.352Cricetulus_griseus_chok1gshd
ENSGAFG00000000884rab5c9891.204ENSCGRG00000007534Rab5c9989.352Cricetulus_griseus_crigri
ENSGAFG00000000884rab5c10094.545ENSCSEG00000017024rab5c10094.545Cynoglossus_semilaevis
ENSGAFG00000000884rab5c10097.727ENSCVAG00000009550rab5c10097.727Cyprinodon_variegatus
ENSGAFG00000000884rab5c9891.204ENSDNOG00000038853RAB5C9988.889Dasypus_novemcinctus
ENSGAFG00000000884rab5c9891.204ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSGAFG00000000884rab5c9871.628FBgn0014010Rab58480.000Drosophila_melanogaster
ENSGAFG00000000884rab5c9977.880ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSGAFG00000000884rab5c9891.204ENSEASG00005009281RAB5C9989.815Equus_asinus_asinus
ENSGAFG00000000884rab5c9891.667ENSECAG00000025054RAB5C9989.815Equus_caballus
ENSGAFG00000000884rab5c9891.204ENSEEUG00000002790RAB5C9989.352Erinaceus_europaeus
ENSGAFG00000000884rab5c10090.455ENSELUG00000010439-10090.455Esox_lucius
ENSGAFG00000000884rab5c9894.444ENSELUG00000018516rab5c9994.444Esox_lucius
ENSGAFG00000000884rab5c9891.204ENSFCAG00000002148RAB5C9989.352Felis_catus
ENSGAFG00000000884rab5c9890.741ENSFDAG00000021541RAB5C9988.889Fukomys_damarensis
ENSGAFG00000000884rab5c9990.411ENSFHEG00000015268-9990.411Fundulus_heteroclitus
ENSGAFG00000000884rab5c10099.091ENSFHEG00000012117rab5c10099.091Fundulus_heteroclitus
ENSGAFG00000000884rab5c7688.095ENSGMOG00000001876-9788.095Gadus_morhua
ENSGAFG00000000884rab5c10095.000ENSGMOG00000015096rab5c10095.000Gadus_morhua
ENSGAFG00000000884rab5c10092.727ENSGACG00000008659rab5c10092.727Gasterosteus_aculeatus
ENSGAFG00000000884rab5c9891.204ENSGGOG00000005472RAB5C9989.815Gorilla_gorilla
ENSGAFG00000000884rab5c10095.455ENSHBUG00000002014rab5c10095.455Haplochromis_burtoni
ENSGAFG00000000884rab5c9689.623ENSHBUG00000006823-10088.288Haplochromis_burtoni
ENSGAFG00000000884rab5c9890.278ENSHGLG00000012067RAB5C9987.963Heterocephalus_glaber_female
ENSGAFG00000000884rab5c9582.381ENSHCOG00000020238-10080.263Hippocampus_comes
ENSGAFG00000000884rab5c9996.804ENSHCOG00000004662rab5c9896.804Hippocampus_comes
ENSGAFG00000000884rab5c9594.258ENSIPUG00000020082rab5c10094.595Ictalurus_punctatus
ENSGAFG00000000884rab5c9890.741ENSSTOG00000006620RAB5C9989.352Ictidomys_tridecemlineatus
ENSGAFG00000000884rab5c9891.667ENSJJAG00000021181Rab5c9989.352Jaculus_jaculus
ENSGAFG00000000884rab5c10097.727ENSKMAG00000020038rab5c10097.727Kryptolebias_marmoratus
ENSGAFG00000000884rab5c9990.411ENSKMAG00000017417-9990.411Kryptolebias_marmoratus
ENSGAFG00000000884rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSGAFG00000000884rab5c10090.045ENSLBEG00000010408-10090.045Labrus_bergylta
ENSGAFG00000000884rab5c9892.593ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSGAFG00000000884rab5c9891.204ENSMFAG00000039627RAB5C9989.815Macaca_fascicularis
ENSGAFG00000000884rab5c9891.204ENSMNEG00000000355RAB5C9989.815Macaca_nemestrina
ENSGAFG00000000884rab5c10096.818ENSMAMG00000022322rab5c10096.818Mastacembelus_armatus
ENSGAFG00000000884rab5c9990.868ENSMAMG00000016207-9990.868Mastacembelus_armatus
ENSGAFG00000000884rab5c9689.623ENSMZEG00005021090-10088.288Maylandia_zebra
ENSGAFG00000000884rab5c10095.455ENSMZEG00005022735rab5c10095.455Maylandia_zebra
ENSGAFG00000000884rab5c9891.667ENSMAUG00000015005Rab5c9989.815Mesocricetus_auratus
ENSGAFG00000000884rab5c9891.204ENSMICG00000041608RAB5C9989.352Microcebus_murinus
ENSGAFG00000000884rab5c9891.667ENSMOCG00000018531-9989.352Microtus_ochrogaster
ENSGAFG00000000884rab5c10096.364ENSMMOG00000020621rab5c10096.364Mola_mola
ENSGAFG00000000884rab5c9989.041ENSMALG00000022348-9989.041Monopterus_albus
ENSGAFG00000000884rab5c9889.767ENSMALG00000006052rab5c9789.954Monopterus_albus
ENSGAFG00000000884rab5c9891.667MGP_CAROLIEiJ_G0017184Rab5c9989.815Mus_caroli
ENSGAFG00000000884rab5c9891.667ENSMUSG00000019173Rab5c9989.815Mus_musculus
ENSGAFG00000000884rab5c9891.667MGP_PahariEiJ_G0018314Rab5c9989.815Mus_pahari
ENSGAFG00000000884rab5c9891.667MGP_SPRETEiJ_G0018027Rab5c9989.815Mus_spretus
ENSGAFG00000000884rab5c9891.204ENSMPUG00000010554RAB5C9989.815Mustela_putorius_furo
ENSGAFG00000000884rab5c9891.204ENSNGAG00000010286Rab5c9989.352Nannospalax_galili
ENSGAFG00000000884rab5c9689.623ENSNBRG00000016922-10088.288Neolamprologus_brichardi
ENSGAFG00000000884rab5c10096.364ENSNBRG00000018165rab5c10096.364Neolamprologus_brichardi
ENSGAFG00000000884rab5c8188.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSGAFG00000000884rab5c9890.741ENSODEG00000017920RAB5C9988.889Octodon_degus
ENSGAFG00000000884rab5c10096.364ENSONIG00000001113rab5c10096.364Oreochromis_niloticus
ENSGAFG00000000884rab5c9996.774ENSORLG00000003882rab5c9996.774Oryzias_latipes
ENSGAFG00000000884rab5c9996.774ENSORLG00020008388rab5c9996.774Oryzias_latipes_hni
ENSGAFG00000000884rab5c9996.774ENSORLG00015021900rab5c9996.774Oryzias_latipes_hsok
ENSGAFG00000000884rab5c9996.774ENSOMEG00000023078rab5c9996.774Oryzias_melastigma
ENSGAFG00000000884rab5c9891.667ENSOGAG00000009456RAB5C9989.815Otolemur_garnettii
ENSGAFG00000000884rab5c9891.204ENSOARG00000018768RAB5C9989.352Ovis_aries
ENSGAFG00000000884rab5c9891.204ENSPPAG00000037206RAB5C9989.815Pan_paniscus
ENSGAFG00000000884rab5c9891.204ENSPPRG00000005745RAB5C9989.352Panthera_pardus
ENSGAFG00000000884rab5c9891.204ENSPTIG00000008177RAB5C9989.352Panthera_tigris_altaica
ENSGAFG00000000884rab5c9891.204ENSPTRG00000009194RAB5C9989.815Pan_troglodytes
ENSGAFG00000000884rab5c9887.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSGAFG00000000884rab5c9888.889ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSGAFG00000000884rab5c10093.182ENSPMGG00000010792rab5c9994.884Periophthalmus_magnuspinnatus
ENSGAFG00000000884rab5c9891.667ENSPEMG00000017971Rab5c9989.352Peromyscus_maniculatus_bairdii
ENSGAFG00000000884rab5c9876.389ENSPMAG00000007867rab5c8983.511Petromyzon_marinus
ENSGAFG00000000884rab5c9975.115ENSPMAG00000001399rab5c9976.389Petromyzon_marinus
ENSGAFG00000000884rab5c9878.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSGAFG00000000884rab5c9891.204ENSPCIG00000020225-9989.815Phascolarctos_cinereus
ENSGAFG00000000884rab5c100100.000ENSPLAG00000004790rab5c100100.000Poecilia_latipinna
ENSGAFG00000000884rab5c9989.954ENSPLAG00000016333-10089.954Poecilia_latipinna
ENSGAFG00000000884rab5c100100.000ENSPMEG00000011336rab5c100100.000Poecilia_mexicana
ENSGAFG00000000884rab5c9691.080ENSPMEG00000012614-10089.686Poecilia_mexicana
ENSGAFG00000000884rab5c8889.691ENSPREG00000022167-8992.896Poecilia_reticulata
ENSGAFG00000000884rab5c100100.000ENSPREG00000010146rab5c100100.000Poecilia_reticulata
ENSGAFG00000000884rab5c9891.204ENSPPYG00000008398RAB5C9989.815Pongo_abelii
ENSGAFG00000000884rab5c9890.278ENSPCAG00000016412RAB5C9988.426Procavia_capensis
ENSGAFG00000000884rab5c9890.741ENSPCOG00000026327RAB5C9988.889Propithecus_coquereli
ENSGAFG00000000884rab5c9891.667ENSPVAG00000003867RAB5C9989.815Pteropus_vampyrus
ENSGAFG00000000884rab5c10095.455ENSPNYG00000010615rab5c10095.455Pundamilia_nyererei
ENSGAFG00000000884rab5c9689.623ENSPNYG00000015851-10088.288Pundamilia_nyererei
ENSGAFG00000000884rab5c10096.833ENSPNAG00000028138rab5c10096.833Pygocentrus_nattereri
ENSGAFG00000000884rab5c9589.474ENSPNAG00000002218-9889.474Pygocentrus_nattereri
ENSGAFG00000000884rab5c9891.667ENSRNOG00000018568Rab5c9989.815Rattus_norvegicus
ENSGAFG00000000884rab5c9891.204ENSRBIG00000031376RAB5C9989.815Rhinopithecus_bieti
ENSGAFG00000000884rab5c9891.204ENSRROG00000032895RAB5C9989.815Rhinopithecus_roxellana
ENSGAFG00000000884rab5c9891.204ENSSBOG00000032552-9989.352Saimiri_boliviensis_boliviensis
ENSGAFG00000000884rab5c9891.667ENSSHAG00000005267-9990.278Sarcophilus_harrisii
ENSGAFG00000000884rab5c10088.182ENSSFOG00015009988-10088.182Scleropages_formosus
ENSGAFG00000000884rab5c9596.651ENSSMAG00000007323rab5c10095.909Scophthalmus_maximus
ENSGAFG00000000884rab5c10097.727ENSSDUG00000023008rab5c10097.727Seriola_dumerili
ENSGAFG00000000884rab5c10096.818ENSSLDG00000017771rab5c10096.818Seriola_lalandi_dorsalis
ENSGAFG00000000884rab5c9892.130ENSSPUG00000012950-9990.278Sphenodon_punctatus
ENSGAFG00000000884rab5c10097.727ENSSPAG00000006436rab5c10097.727Stegastes_partitus
ENSGAFG00000000884rab5c9891.204ENSSSCG00000032467RAB5C9989.352Sus_scrofa
ENSGAFG00000000884rab5c10095.000ENSTRUG00000015590rab5c10095.000Takifugu_rubripes
ENSGAFG00000000884rab5c9696.682ENSTNIG00000011711rab5c9596.682Tetraodon_nigroviridis
ENSGAFG00000000884rab5c9891.204ENSTBEG00000007092RAB5C9989.815Tupaia_belangeri
ENSGAFG00000000884rab5c9890.741ENSTTRG00000006673RAB5C9988.889Tursiops_truncatus
ENSGAFG00000000884rab5c9891.204ENSUAMG00000024343RAB5C9989.815Ursus_americanus
ENSGAFG00000000884rab5c9891.204ENSUMAG00000023270RAB5C9989.815Ursus_maritimus
ENSGAFG00000000884rab5c10099.545ENSXCOG00000016788rab5c10099.545Xiphophorus_couchianus
ENSGAFG00000000884rab5c9591.388ENSXCOG00000006300-9989.189Xiphophorus_couchianus
ENSGAFG00000000884rab5c100100.000ENSXMAG00000003266rab5c100100.000Xiphophorus_maculatus
ENSGAFG00000000884rab5c9989.498ENSXMAG00000022179-10089.498Xiphophorus_maculatus

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