EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000000907 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-24l11.2
Alias: -
Full Name: si:dkey-24l11.2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5220 bases
Position: chrNHOQ01002850.1:663297-668516
Accession: ZDB-GENE-050419-208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001333	zf-CCCH	PF00642.24	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001372	-	618	-	ENSGAFP00000001356	205 (aa)	-	-
ENSGAFT00000001349	-	3048	-	ENSGAFP00000001333	655 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000907	si:dkey-24l11.2	60	68.421	ENSAPOG00000009246	-	99	68.421	Acanthochromis_polyacanthus
ENSGAFG00000000907	si:dkey-24l11.2	59	68.992	ENSACIG00000000516	-	100	66.995	Amphilophus_citrinellus
ENSGAFG00000000907	si:dkey-24l11.2	61	68.227	ENSAOCG00000003240	-	92	67.241	Amphiprion_ocellaris
ENSGAFG00000000907	si:dkey-24l11.2	99	73.979	ENSATEG00000006680	si:dkey-24l11.2	99	73.979	Anabas_testudineus
ENSGAFG00000000907	si:dkey-24l11.2	62	67.482	ENSACLG00000019918	-	100	67.407	Astatotilapia_calliptera
ENSGAFG00000000907	si:dkey-24l11.2	96	60.964	ENSAMXG00000035914	si:dkey-24l11.2	92	60.957	Astyanax_mexicanus
ENSGAFG00000000907	si:dkey-24l11.2	100	69.208	ENSCSEG00000013278	si:dkey-24l11.2	100	69.208	Cynoglossus_semilaevis
ENSGAFG00000000907	si:dkey-24l11.2	100	81.873	ENSCVAG00000016988	si:dkey-24l11.2	100	81.269	Cyprinodon_variegatus
ENSGAFG00000000907	si:dkey-24l11.2	99	61.119	ENSELUG00000018751	si:dkey-24l11.2	97	61.493	Esox_lucius
ENSGAFG00000000907	si:dkey-24l11.2	62	67.482	ENSHBUG00000000459	-	100	67.407	Haplochromis_burtoni
ENSGAFG00000000907	si:dkey-24l11.2	99	69.115	ENSHCOG00000011721	si:dkey-24l11.2	99	68.966	Hippocampus_comes
ENSGAFG00000000907	si:dkey-24l11.2	100	76.444	ENSKMAG00000016828	si:dkey-24l11.2	99	76.292	Kryptolebias_marmoratus
ENSGAFG00000000907	si:dkey-24l11.2	99	60.444	ENSLOCG00000014681	si:dkey-24l11.2	98	60.503	Lepisosteus_oculatus
ENSGAFG00000000907	si:dkey-24l11.2	100	74.543	ENSMAMG00000008500	si:dkey-24l11.2	99	74.620	Mastacembelus_armatus
ENSGAFG00000000907	si:dkey-24l11.2	62	67.482	ENSMZEG00005022357	-	100	67.407	Maylandia_zebra
ENSGAFG00000000907	si:dkey-24l11.2	61	65.366	ENSMMOG00000006855	-	95	65.854	Mola_mola
ENSGAFG00000000907	si:dkey-24l11.2	97	73.209	ENSMALG00000009557	si:dkey-24l11.2	98	72.586	Monopterus_albus
ENSGAFG00000000907	si:dkey-24l11.2	60	60.804	ENSORLG00000007981	-	93	60.302	Oryzias_latipes
ENSGAFG00000000907	si:dkey-24l11.2	60	64.662	ENSORLG00020005134	-	96	63.910	Oryzias_latipes_hni
ENSGAFG00000000907	si:dkey-24l11.2	61	62.871	ENSOMEG00000023279	-	99	62.871	Oryzias_melastigma
ENSGAFG00000000907	si:dkey-24l11.2	96	58.842	ENSPKIG00000001978	si:dkey-24l11.2	97	58.733	Paramormyrops_kingsleyae
ENSGAFG00000000907	si:dkey-24l11.2	62	89.435	ENSPFOG00000003642	si:dkey-24l11.2	100	89.435	Poecilia_formosa
ENSGAFG00000000907	si:dkey-24l11.2	62	89.706	ENSPLAG00000017675	-	93	89.051	Poecilia_latipinna
ENSGAFG00000000907	si:dkey-24l11.2	100	91.945	ENSPMEG00000001177	si:dkey-24l11.2	100	91.945	Poecilia_mexicana
ENSGAFG00000000907	si:dkey-24l11.2	100	89.058	ENSPREG00000008065	si:dkey-24l11.2	94	89.058	Poecilia_reticulata
ENSGAFG00000000907	si:dkey-24l11.2	62	67.476	ENSPNYG00000011245	-	99	66.912	Pundamilia_nyererei
ENSGAFG00000000907	si:dkey-24l11.2	100	59.797	ENSPNAG00000001676	si:dkey-24l11.2	96	59.302	Pygocentrus_nattereri
ENSGAFG00000000907	si:dkey-24l11.2	98	59.699	ENSSFOG00015020381	si:dkey-24l11.2	96	59.699	Scleropages_formosus
ENSGAFG00000000907	si:dkey-24l11.2	98	72.146	ENSSMAG00000000823	si:dkey-24l11.2	98	72.146	Scophthalmus_maximus
ENSGAFG00000000907	si:dkey-24l11.2	100	72.727	ENSSDUG00000010620	si:dkey-24l11.2	100	73.323	Seriola_dumerili
ENSGAFG00000000907	si:dkey-24l11.2	100	72.876	ENSSLDG00000000205	si:dkey-24l11.2	100	73.621	Seriola_lalandi_dorsalis
ENSGAFG00000000907	si:dkey-24l11.2	100	73.596	ENSSPAG00000020867	si:dkey-24l11.2	100	73.596	Stegastes_partitus
ENSGAFG00000000907	si:dkey-24l11.2	99	67.830	ENSTRUG00000021832	si:dkey-24l11.2	98	68.636	Takifugu_rubripes
ENSGAFG00000000907	si:dkey-24l11.2	97	64.241	ENSTNIG00000019253	si:dkey-24l11.2	97	64.506	Tetraodon_nigroviridis
ENSGAFG00000000907	si:dkey-24l11.2	62	90.196	ENSXCOG00000020217	-	100	90.196	Xiphophorus_couchianus
ENSGAFG00000000907	si:dkey-24l11.2	100	92.097	ENSXMAG00000003014	si:dkey-24l11.2	100	92.097	Xiphophorus_maculatus