EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000000918 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5867 bases
Position: chrNHOQ01002483.1:122444-128310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001322	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001338	-	2499	-	ENSGAFP00000001322	202 (aa)	-	UPI0004A4A8C5
ENSGAFT00000001343	-	417	-	ENSGAFP00000001327	138 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000000918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000000918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000000918	-	100	92.118	ENSGAFG00000001289	rab1ab	100	92.118
ENSGAFG00000000918	-	84	49.704	ENSGAFG00000002756	rab15	79	49.704
ENSGAFG00000000918	-	85	40.341	ENSGAFG00000008183	si:dkey-34d22.5	79	40.341
ENSGAFG00000000918	-	58	32.203	ENSGAFG00000010938	arl8ba	63	32.203
ENSGAFG00000000918	-	96	44.615	ENSGAFG00000000884	rab5c	89	44.615
ENSGAFG00000000918	-	87	43.258	ENSGAFG00000002141	rab42a	82	43.258
ENSGAFG00000000918	-	83	52.976	ENSGAFG00000005679	rab11ba	77	52.976
ENSGAFG00000000918	-	90	44.809	ENSGAFG00000003642	-	89	43.939
ENSGAFG00000000918	-	90	58.919	ENSGAFG00000005388	si:dkey-16l2.16	84	58.919
ENSGAFG00000000918	-	98	44.608	ENSGAFG00000011713	rab25a	90	54.667
ENSGAFG00000000918	-	99	42.254	ENSGAFG00000005477	rab4a	100	42.254
ENSGAFG00000000918	-	82	33.533	ENSGAFG00000020906	rheb	90	33.533
ENSGAFG00000000918	-	84	45.614	ENSGAFG00000004604	RAB39B	80	45.614
ENSGAFG00000000918	-	96	43.878	ENSGAFG00000011619	rab5aa	89	43.878
ENSGAFG00000000918	-	82	35.928	ENSGAFG00000018295	si:ch73-116o1.2	80	35.928
ENSGAFG00000000918	-	81	30.814	ENSGAFG00000014541	rras2	82	30.814
ENSGAFG00000000918	-	58	32.500	ENSGAFG00000014283	arl4aa	59	32.500
ENSGAFG00000000918	-	82	42.169	ENSGAFG00000014730	-	82	42.169
ENSGAFG00000000918	-	99	46.890	ENSGAFG00000007102	rab11bb	96	46.890
ENSGAFG00000000918	-	80	40.994	ENSGAFG00000010916	rab6bb	77	40.994
ENSGAFG00000000918	-	72	46.053	ENSGAFG00000015249	-	63	46.053
ENSGAFG00000000918	-	82	34.132	ENSGAFG00000021738	rhebl1	90	34.132
ENSGAFG00000000918	-	96	38.144	ENSGAFG00000001301	rab22a	97	38.144
ENSGAFG00000000918	-	68	32.000	ENSGAFG00000006962	arfrp1	72	32.000
ENSGAFG00000000918	-	78	37.654	ENSGAFG00000012579	rab34a	60	37.654
ENSGAFG00000000918	-	57	34.188	ENSGAFG00000017776	arl8a	66	34.188
ENSGAFG00000000918	-	81	49.693	ENSGAFG00000017305	RAB15	83	56.452
ENSGAFG00000000918	-	89	31.527	ENSGAFG00000007473	rasl11a	79	31.527
ENSGAFG00000000918	-	80	36.970	ENSGAFG00000020102	si:dkey-13a21.4	80	36.970
ENSGAFG00000000918	-	81	36.970	ENSGAFG00000021765	kras	95	34.807
ENSGAFG00000000918	-	78	40.625	ENSGAFG00000015135	rab36	62	40.625
ENSGAFG00000000918	-	98	31.553	ENSGAFG00000000629	RAB29	99	31.553
ENSGAFG00000000918	-	81	35.366	ENSGAFG00000010541	rras	83	35.366
ENSGAFG00000000918	-	84	45.614	ENSGAFG00000006932	-	80	45.614
ENSGAFG00000000918	-	58	31.933	ENSGAFG00000020556	arl4cb	61	31.933
ENSGAFG00000000918	-	79	39.877	ENSGAFG00000021688	-	79	39.877
ENSGAFG00000000918	-	97	35.437	ENSGAFG00000018916	-	86	35.437
ENSGAFG00000000918	-	82	51.497	ENSGAFG00000002790	rab18a	93	46.667
ENSGAFG00000000918	-	58	32.231	ENSGAFG00000015025	arl2	61	32.231
ENSGAFG00000000918	-	96	37.629	ENSGAFG00000019872	rab41	91	37.629
ENSGAFG00000000918	-	94	76.289	ENSGAFG00000015702	zgc:171927	78	76.289
ENSGAFG00000000918	-	96	44.103	ENSGAFG00000008560	rab18b	95	44.103
ENSGAFG00000000918	-	81	45.833	ENSGAFG00000021202	zgc:101559	72	45.833
ENSGAFG00000000918	-	99	49.515	ENSGAFG00000016549	rab11a	96	49.515
ENSGAFG00000000918	-	90	34.066	ENSGAFG00000007684	rab23	98	32.673
ENSGAFG00000000918	-	77	36.538	ENSGAFG00000005188	rabl2	68	36.538
ENSGAFG00000000918	-	97	37.561	ENSGAFG00000000591	rab9a	90	37.561
ENSGAFG00000000918	-	79	39.877	ENSGAFG00000020476	RAB7A	79	39.877
ENSGAFG00000000918	-	50	33.654	ENSGAFG00000002801	-	83	33.654
ENSGAFG00000000918	-	98	45.714	ENSGAFG00000006846	rab2a	99	45.714
ENSGAFG00000000918	-	88	55.866	ENSGAFG00000014787	-	93	53.261
ENSGAFG00000000918	-	69	30.496	ENSGAFG00000005872	arl3	74	30.496
ENSGAFG00000000918	-	81	44.048	ENSGAFG00000015490	rab33a	61	44.048
ENSGAFG00000000918	-	61	34.127	ENSGAFG00000012473	arl4d	61	34.127
ENSGAFG00000000918	-	100	91.089	ENSGAFG00000019305	rab1ba	100	91.089
ENSGAFG00000000918	-	85	35.593	ENSGAFG00000021814	hrasb	93	35.593
ENSGAFG00000000918	-	82	51.205	ENSGAFG00000020309	rab30	87	51.205
ENSGAFG00000000918	-	99	47.343	ENSGAFG00000021725	rab11al	96	47.343
ENSGAFG00000000918	-	98	36.232	ENSGAFG00000004099	rab9b	88	36.232
ENSGAFG00000000918	-	96	38.776	ENSGAFG00000017270	rab6ba	94	38.776
ENSGAFG00000000918	-	98	42.718	ENSGAFG00000021724	rab25b	96	42.718
ENSGAFG00000000918	-	85	43.243	ENSGAFG00000019659	rab33ba	76	43.243
ENSGAFG00000000918	-	96	39.175	ENSGAFG00000006356	rab6a	93	39.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000000918	-	100	94.554	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSGAFG00000000918	-	100	97.525	ENSAPOG00000008143	-	100	97.525	Acanthochromis_polyacanthus
ENSGAFG00000000918	-	100	94.554	ENSAMEG00000001127	RAB1A	99	94.554	Ailuropoda_melanoleuca
ENSGAFG00000000918	-	100	97.525	ENSAOCG00000020606	-	100	97.525	Amphiprion_ocellaris
ENSGAFG00000000918	-	100	97.525	ENSAPEG00000022488	-	100	97.525	Amphiprion_percula
ENSGAFG00000000918	-	100	94.554	ENSANAG00000020929	RAB1A	99	94.554	Aotus_nancymaae
ENSGAFG00000000918	-	100	98.020	ENSACLG00000003326	-	100	98.020	Astatotilapia_calliptera
ENSGAFG00000000918	-	100	92.574	ENSAMXG00000034850	-	100	92.574	Astyanax_mexicanus
ENSGAFG00000000918	-	100	94.554	ENSBTAG00000016720	RAB1A	99	94.554	Bos_taurus
ENSGAFG00000000918	-	100	94.554	ENSCJAG00000046275	RAB1A	99	94.554	Callithrix_jacchus
ENSGAFG00000000918	-	100	94.554	ENSCAFG00000003187	RAB1A	99	94.554	Canis_familiaris
ENSGAFG00000000918	-	100	94.554	ENSCAFG00020026971	RAB1A	99	94.554	Canis_lupus_dingo
ENSGAFG00000000918	-	98	94.416	ENSCHIG00000014060	RAB1A	100	91.707	Capra_hircus
ENSGAFG00000000918	-	100	93.069	ENSTSYG00000005996	RAB1A	100	94.416	Carlito_syrichta
ENSGAFG00000000918	-	100	94.554	ENSCPOG00000015437	RAB1A	99	94.554	Cavia_porcellus
ENSGAFG00000000918	-	100	94.554	ENSCCAG00000021869	RAB1A	99	94.554	Cebus_capucinus
ENSGAFG00000000918	-	100	94.554	ENSCATG00000030853	RAB1A	99	94.554	Cercocebus_atys
ENSGAFG00000000918	-	100	94.554	ENSCLAG00000014766	RAB1A	99	94.554	Chinchilla_lanigera
ENSGAFG00000000918	-	100	95.050	ENSCPBG00000013243	RAB1A	99	95.050	Chrysemys_picta_bellii
ENSGAFG00000000918	-	100	92.574	ENSCANG00000035916	RAB1A	99	92.574	Colobus_angolensis_palliatus
ENSGAFG00000000918	-	100	94.554	ENSCGRG00001012691	-	99	94.554	Cricetulus_griseus_chok1gshd
ENSGAFG00000000918	-	100	94.554	ENSCGRG00000008456	-	99	94.554	Cricetulus_griseus_crigri
ENSGAFG00000000918	-	100	94.554	ENSDNOG00000018236	RAB1A	99	94.554	Dasypus_novemcinctus
ENSGAFG00000000918	-	100	94.554	ENSDORG00000028628	-	99	94.554	Dipodomys_ordii
ENSGAFG00000000918	-	100	85.714	FBgn0285937	Rab1	99	85.714	Drosophila_melanogaster
ENSGAFG00000000918	-	100	94.554	ENSETEG00000002205	RAB1A	100	94.554	Echinops_telfairi
ENSGAFG00000000918	-	100	94.554	ENSEASG00005007298	RAB1A	99	94.554	Equus_asinus_asinus
ENSGAFG00000000918	-	100	94.554	ENSECAG00000009926	RAB1A	99	94.554	Equus_caballus
ENSGAFG00000000918	-	100	94.554	ENSEEUG00000011721	RAB1A	100	94.554	Erinaceus_europaeus
ENSGAFG00000000918	-	100	94.118	ENSELUG00000012166	RAB1A	96	94.118	Esox_lucius
ENSGAFG00000000918	-	100	94.554	ENSFCAG00000002536	RAB1A	99	94.554	Felis_catus
ENSGAFG00000000918	-	100	93.069	ENSFALG00000013624	RAB1A	99	93.069	Ficedula_albicollis
ENSGAFG00000000918	-	100	94.554	ENSFDAG00000019505	-	99	94.554	Fukomys_damarensis
ENSGAFG00000000918	-	100	97.525	ENSFHEG00000014414	-	100	97.525	Fundulus_heteroclitus
ENSGAFG00000000918	-	100	95.050	ENSGALG00000031582	RAB1A	99	95.050	Gallus_gallus
ENSGAFG00000000918	-	100	95.050	ENSGAGG00000006802	RAB1A	99	95.050	Gopherus_agassizii
ENSGAFG00000000918	-	100	94.554	ENSGGOG00000026603	RAB1A	99	94.554	Gorilla_gorilla
ENSGAFG00000000918	-	100	94.554	ENSHGLG00000013585	RAB1A	99	94.554	Heterocephalus_glaber_female
ENSGAFG00000000918	-	100	93.069	ENSHGLG00100007994	RAB1A	99	93.069	Heterocephalus_glaber_male
ENSGAFG00000000918	-	100	94.554	ENSSTOG00000020693	-	99	94.554	Ictidomys_tridecemlineatus
ENSGAFG00000000918	-	98	94.416	ENSJJAG00000014396	Rab1a	100	94.416	Jaculus_jaculus
ENSGAFG00000000918	-	98	96.954	ENSKMAG00000014038	-	93	96.954	Kryptolebias_marmoratus
ENSGAFG00000000918	-	100	96.535	ENSLBEG00000028426	RAB1A	100	96.535	Labrus_bergylta
ENSGAFG00000000918	-	100	94.554	ENSLACG00000012869	RAB1A	99	94.554	Latimeria_chalumnae
ENSGAFG00000000918	-	100	94.554	ENSLAFG00000016666	RAB1A	99	94.554	Loxodonta_africana
ENSGAFG00000000918	-	100	94.554	ENSMFAG00000046246	RAB1A	99	94.554	Macaca_fascicularis
ENSGAFG00000000918	-	98	94.416	ENSMMUG00000021721	RAB1A	91	94.416	Macaca_mulatta
ENSGAFG00000000918	-	95	95.812	ENSMNEG00000028414	-	96	95.812	Macaca_nemestrina
ENSGAFG00000000918	-	100	94.554	ENSMLEG00000042535	RAB1A	99	94.554	Mandrillus_leucophaeus
ENSGAFG00000000918	-	100	98.020	ENSMZEG00005013959	-	100	98.020	Maylandia_zebra
ENSGAFG00000000918	-	98	94.924	ENSMGAG00000004611	RAB1A	98	94.924	Meleagris_gallopavo
ENSGAFG00000000918	-	100	94.059	ENSMAUG00000012156	Rab1a	99	94.059	Mesocricetus_auratus
ENSGAFG00000000918	-	100	94.554	ENSMICG00000012587	RAB1A	99	94.554	Microcebus_murinus
ENSGAFG00000000918	-	100	94.059	ENSMOCG00000017022	Rab1a	99	94.059	Microtus_ochrogaster
ENSGAFG00000000918	-	100	96.535	ENSMMOG00000018709	RAB1A	100	96.535	Mola_mola
ENSGAFG00000000918	-	100	95.050	ENSMODG00000003340	RAB1A	99	95.050	Monodelphis_domestica
ENSGAFG00000000918	-	100	94.554	MGP_CAROLIEiJ_G0016115	Rab1a	99	94.554	Mus_caroli
ENSGAFG00000000918	-	100	94.554	ENSMUSG00000020149	Rab1a	100	94.554	Mus_musculus
ENSGAFG00000000918	-	100	94.554	MGP_PahariEiJ_G0016776	Rab1a	99	94.554	Mus_pahari
ENSGAFG00000000918	-	100	94.554	MGP_SPRETEiJ_G0016958	Rab1a	100	94.554	Mus_spretus
ENSGAFG00000000918	-	100	94.554	ENSMPUG00000006139	RAB1A	80	94.554	Mustela_putorius_furo
ENSGAFG00000000918	-	100	94.554	ENSMLUG00000009489	RAB1A	99	94.554	Myotis_lucifugus
ENSGAFG00000000918	-	100	94.554	ENSNGAG00000005838	Rab1a	99	94.554	Nannospalax_galili
ENSGAFG00000000918	-	100	98.020	ENSNBRG00000020492	-	100	98.020	Neolamprologus_brichardi
ENSGAFG00000000918	-	98	94.416	ENSOPRG00000006595	RAB1A	100	94.416	Ochotona_princeps
ENSGAFG00000000918	-	94	94.180	ENSODEG00000011248	-	96	94.271	Octodon_degus
ENSGAFG00000000918	-	100	96.040	ENSONIG00000006819	-	99	96.040	Oreochromis_niloticus
ENSGAFG00000000918	-	100	95.050	ENSOANG00000012438	RAB1A	99	95.050	Ornithorhynchus_anatinus
ENSGAFG00000000918	-	100	94.554	ENSOCUG00000017003	RAB1A	99	94.554	Oryctolagus_cuniculus
ENSGAFG00000000918	-	100	94.554	ENSOGAG00000026181	RAB1A	99	94.554	Otolemur_garnettii
ENSGAFG00000000918	-	98	94.416	ENSOARG00000019997	RAB1A	97	94.416	Ovis_aries
ENSGAFG00000000918	-	100	94.554	ENSPPAG00000030253	RAB1A	100	94.554	Pan_paniscus
ENSGAFG00000000918	-	100	94.554	ENSPPRG00000025077	RAB1A	99	94.554	Panthera_pardus
ENSGAFG00000000918	-	98	94.416	ENSPTIG00000013471	RAB1A	97	94.416	Panthera_tigris_altaica
ENSGAFG00000000918	-	100	94.554	ENSPTRG00000011989	RAB1A	99	94.554	Pan_troglodytes
ENSGAFG00000000918	-	100	94.554	ENSPANG00000010485	RAB1A	99	94.554	Papio_anubis
ENSGAFG00000000918	-	100	92.574	ENSPSIG00000008028	RAB1A	99	92.574	Pelodiscus_sinensis
ENSGAFG00000000918	-	100	97.525	ENSPMGG00000021015	-	99	97.525	Periophthalmus_magnuspinnatus
ENSGAFG00000000918	-	100	94.554	ENSPEMG00000009340	Rab1a	99	94.554	Peromyscus_maniculatus_bairdii
ENSGAFG00000000918	-	100	95.050	ENSPCIG00000023212	RAB1A	99	95.050	Phascolarctos_cinereus
ENSGAFG00000000918	-	100	99.505	ENSPFOG00000000498	-	98	99.505	Poecilia_formosa
ENSGAFG00000000918	-	100	99.505	ENSPLAG00000015592	-	100	99.505	Poecilia_latipinna
ENSGAFG00000000918	-	100	99.505	ENSPMEG00000005288	-	100	99.505	Poecilia_mexicana
ENSGAFG00000000918	-	100	94.554	ENSPPYG00000012360	RAB1A	99	94.554	Pongo_abelii
ENSGAFG00000000918	-	100	94.554	ENSPCOG00000017244	RAB1A	99	94.554	Propithecus_coquereli
ENSGAFG00000000918	-	100	98.020	ENSPNYG00000015841	-	100	98.020	Pundamilia_nyererei
ENSGAFG00000000918	-	100	94.554	ENSRNOG00000004992	Rab1a	99	94.554	Rattus_norvegicus
ENSGAFG00000000918	-	100	94.554	ENSSBOG00000023732	RAB1A	99	94.554	Saimiri_boliviensis_boliviensis
ENSGAFG00000000918	-	98	94.924	ENSSHAG00000003597	RAB1A	98	93.532	Sarcophilus_harrisii
ENSGAFG00000000918	-	100	97.030	ENSSMAG00000021049	-	100	97.030	Scophthalmus_maximus
ENSGAFG00000000918	-	100	98.020	ENSSDUG00000022535	RAB1A	100	98.020	Seriola_dumerili
ENSGAFG00000000918	-	100	95.050	ENSSPUG00000012822	RAB1A	99	95.050	Sphenodon_punctatus
ENSGAFG00000000918	-	100	97.525	ENSSPAG00000012564	-	100	97.525	Stegastes_partitus
ENSGAFG00000000918	-	100	94.554	ENSSSCG00000008359	RAB1A	100	94.416	Sus_scrofa
ENSGAFG00000000918	-	100	93.069	ENSTGUG00000002328	RAB1A	99	93.069	Taeniopygia_guttata
ENSGAFG00000000918	-	100	97.030	ENSTRUG00000024994	RAB1A	100	97.030	Takifugu_rubripes
ENSGAFG00000000918	-	98	94.416	ENSUMAG00000021038	RAB1A	99	94.416	Ursus_maritimus
ENSGAFG00000000918	-	98	93.939	ENSVPAG00000005640	RAB1A	99	93.939	Vicugna_pacos
ENSGAFG00000000918	-	100	94.554	ENSVVUG00000027588	RAB1A	99	94.554	Vulpes_vulpes
ENSGAFG00000000918	-	100	100.000	ENSXMAG00000015776	-	100	100.000	Xiphophorus_maculatus