EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001046 (Gene tree)
Gene ID: -
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5919 bases
Position: chrNHOQ01002941.1:80564-86482
Accession: ZDB-GENE-030131-2466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001491	DBR1	PF05011.13	1.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001508	-	2821	-	ENSGAFP00000001491	538 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001046	dbr1	98	55.535	ENSG00000138231	DBR1	94	79.279	Homo_sapiens
ENSGAFG00000001046	dbr1	100	79.459	ENSAPOG00000004318	dbr1	100	79.385	Acanthochromis_polyacanthus
ENSGAFG00000001046	dbr1	98	55.224	ENSAMEG00000006272	DBR1	99	55.064	Ailuropoda_melanoleuca
ENSGAFG00000001046	dbr1	100	77.018	ENSACIG00000020512	dbr1	100	77.249	Amphilophus_citrinellus
ENSGAFG00000001046	dbr1	100	78.777	ENSAOCG00000008060	dbr1	100	79.137	Amphiprion_ocellaris
ENSGAFG00000001046	dbr1	100	78.957	ENSAPEG00000021944	dbr1	100	79.317	Amphiprion_percula
ENSGAFG00000001046	dbr1	99	75.714	ENSATEG00000019673	dbr1	98	78.008	Anabas_testudineus
ENSGAFG00000001046	dbr1	99	56.648	ENSACAG00000016760	DBR1	100	55.957	Anolis_carolinensis
ENSGAFG00000001046	dbr1	98	56.098	ENSANAG00000028952	DBR1	99	55.985	Aotus_nancymaae
ENSGAFG00000001046	dbr1	100	77.419	ENSACLG00000024027	dbr1	100	78.853	Astatotilapia_calliptera
ENSGAFG00000001046	dbr1	99	66.958	ENSAMXG00000030736	dbr1	99	67.247	Astyanax_mexicanus
ENSGAFG00000001046	dbr1	99	55.474	ENSBTAG00000019949	DBR1	99	55.109	Bos_taurus
ENSGAFG00000001046	dbr1	70	45.293	WBGene00000937	dbr-1	78	45.293	Caenorhabditis_elegans
ENSGAFG00000001046	dbr1	98	55.720	ENSCJAG00000002433	DBR1	99	55.373	Callithrix_jacchus
ENSGAFG00000001046	dbr1	98	55.926	ENSCAFG00000007501	DBR1	99	55.393	Canis_familiaris
ENSGAFG00000001046	dbr1	98	55.926	ENSCAFG00020008060	DBR1	99	55.393	Canis_lupus_dingo
ENSGAFG00000001046	dbr1	99	55.109	ENSCHIG00000026937	DBR1	99	54.745	Capra_hircus
ENSGAFG00000001046	dbr1	100	55.292	ENSTSYG00000005317	DBR1	99	54.927	Carlito_syrichta
ENSGAFG00000001046	dbr1	98	53.846	ENSCPOG00000006179	DBR1	99	53.165	Cavia_porcellus
ENSGAFG00000001046	dbr1	98	55.701	ENSCCAG00000025708	DBR1	99	55.535	Cebus_capucinus
ENSGAFG00000001046	dbr1	80	62.963	ENSCATG00000032054	DBR1	99	55.617	Cercocebus_atys
ENSGAFG00000001046	dbr1	98	54.664	ENSCLAG00000001800	DBR1	99	54.845	Chinchilla_lanigera
ENSGAFG00000001046	dbr1	80	62.731	ENSCSAG00000010977	DBR1	99	55.433	Chlorocebus_sabaeus
ENSGAFG00000001046	dbr1	89	66.667	ENSCHOG00000000730	DBR1	89	66.667	Choloepus_hoffmanni
ENSGAFG00000001046	dbr1	99	58.148	ENSCPBG00000007633	DBR1	90	57.380	Chrysemys_picta_bellii
ENSGAFG00000001046	dbr1	81	54.853	ENSCING00000011388	-	87	59.737	Ciona_intestinalis
ENSGAFG00000001046	dbr1	70	57.937	ENSCSAVG00000007545	-	100	57.937	Ciona_savignyi
ENSGAFG00000001046	dbr1	98	56.089	ENSCANG00000024237	DBR1	99	55.801	Colobus_angolensis_palliatus
ENSGAFG00000001046	dbr1	99	56.204	ENSCGRG00001018497	Dbr1	100	56.204	Cricetulus_griseus_chok1gshd
ENSGAFG00000001046	dbr1	99	51.376	ENSCGRG00000005958	Dbr1	99	51.376	Cricetulus_griseus_crigri
ENSGAFG00000001046	dbr1	99	73.477	ENSCSEG00000002813	dbr1	99	74.014	Cynoglossus_semilaevis
ENSGAFG00000001046	dbr1	99	81.522	ENSCVAG00000019969	dbr1	99	83.696	Cyprinodon_variegatus
ENSGAFG00000001046	dbr1	99	64.623	ENSDARG00000056923	dbr1	99	66.025	Danio_rerio
ENSGAFG00000001046	dbr1	98	57.537	ENSDNOG00000043630	DBR1	99	56.806	Dasypus_novemcinctus
ENSGAFG00000001046	dbr1	71	51.773	FBgn0035838	ldbr	79	51.887	Drosophila_melanogaster
ENSGAFG00000001046	dbr1	59	81.343	ENSETEG00000011830	DBR1	79	81.343	Echinops_telfairi
ENSGAFG00000001046	dbr1	99	46.073	ENSEBUG00000007494	dbr1	75	54.419	Eptatretus_burgeri
ENSGAFG00000001046	dbr1	98	55.920	ENSEASG00005003788	DBR1	99	55.373	Equus_asinus_asinus
ENSGAFG00000001046	dbr1	98	56.102	ENSECAG00000013920	DBR1	99	55.556	Equus_caballus
ENSGAFG00000001046	dbr1	99	46.069	ENSEEUG00000007059	DBR1	99	46.069	Erinaceus_europaeus
ENSGAFG00000001046	dbr1	99	68.319	ENSELUG00000005587	dbr1	99	71.530	Esox_lucius
ENSGAFG00000001046	dbr1	98	56.562	ENSFCAG00000002229	DBR1	99	56.022	Felis_catus
ENSGAFG00000001046	dbr1	99	56.284	ENSFALG00000013467	DBR1	86	56.466	Ficedula_albicollis
ENSGAFG00000001046	dbr1	98	55.370	ENSFDAG00000009524	DBR1	99	55.210	Fukomys_damarensis
ENSGAFG00000001046	dbr1	100	84.409	ENSFHEG00000001743	dbr1	100	83.154	Fundulus_heteroclitus
ENSGAFG00000001046	dbr1	99	71.377	ENSGMOG00000006925	dbr1	99	70.304	Gadus_morhua
ENSGAFG00000001046	dbr1	99	50.642	ENSGALG00000043797	DBR1	100	50.549	Gallus_gallus
ENSGAFG00000001046	dbr1	99	74.775	ENSGACG00000009122	dbr1	99	75.495	Gasterosteus_aculeatus
ENSGAFG00000001046	dbr1	99	57.486	ENSGAGG00000001244	DBR1	100	57.116	Gopherus_agassizii
ENSGAFG00000001046	dbr1	98	51.476	ENSGGOG00000004564	DBR1	99	51.002	Gorilla_gorilla
ENSGAFG00000001046	dbr1	100	77.599	ENSHBUG00000000882	dbr1	100	79.032	Haplochromis_burtoni
ENSGAFG00000001046	dbr1	98	55.373	ENSHGLG00000014529	Dbr1	99	55.135	Heterocephalus_glaber_female
ENSGAFG00000001046	dbr1	98	55.373	ENSHGLG00100013202	Dbr1	99	55.135	Heterocephalus_glaber_male
ENSGAFG00000001046	dbr1	99	74.088	ENSHCOG00000004179	dbr1	99	74.088	Hippocampus_comes
ENSGAFG00000001046	dbr1	99	64.014	ENSIPUG00000023749	dbr1	99	65.112	Ictalurus_punctatus
ENSGAFG00000001046	dbr1	98	56.697	ENSSTOG00000007122	DBR1	99	56.204	Ictidomys_tridecemlineatus
ENSGAFG00000001046	dbr1	99	55.054	ENSJJAG00000017080	Dbr1	100	54.513	Jaculus_jaculus
ENSGAFG00000001046	dbr1	99	78.623	ENSKMAG00000004869	dbr1	99	79.710	Kryptolebias_marmoratus
ENSGAFG00000001046	dbr1	99	74.823	ENSLBEG00000021307	dbr1	99	75.532	Labrus_bergylta
ENSGAFG00000001046	dbr1	99	60.146	ENSLACG00000005547	DBR1	99	60.146	Latimeria_chalumnae
ENSGAFG00000001046	dbr1	100	64.401	ENSLOCG00000004160	dbr1	100	66.190	Lepisosteus_oculatus
ENSGAFG00000001046	dbr1	99	56.022	ENSLAFG00000005827	DBR1	99	55.985	Loxodonta_africana
ENSGAFG00000001046	dbr1	98	55.844	ENSMFAG00000043642	DBR1	99	55.617	Macaca_fascicularis
ENSGAFG00000001046	dbr1	98	55.844	ENSMMUG00000021284	DBR1	99	55.617	Macaca_mulatta
ENSGAFG00000001046	dbr1	98	55.844	ENSMNEG00000041740	DBR1	99	55.617	Macaca_nemestrina
ENSGAFG00000001046	dbr1	87	45.417	ENSMLEG00000034542	DBR1	95	45.248	Mandrillus_leucophaeus
ENSGAFG00000001046	dbr1	99	77.620	ENSMAMG00000012205	dbr1	99	76.732	Mastacembelus_armatus
ENSGAFG00000001046	dbr1	100	77.419	ENSMZEG00005021338	dbr1	100	78.853	Maylandia_zebra
ENSGAFG00000001046	dbr1	80	51.826	ENSMGAG00000002142	DBR1	99	51.945	Meleagris_gallopavo
ENSGAFG00000001046	dbr1	99	57.246	ENSMAUG00000010037	Dbr1	100	57.246	Mesocricetus_auratus
ENSGAFG00000001046	dbr1	98	55.780	ENSMICG00000049533	DBR1	99	55.435	Microcebus_murinus
ENSGAFG00000001046	dbr1	99	56.296	ENSMOCG00000018746	Dbr1	99	56.296	Microtus_ochrogaster
ENSGAFG00000001046	dbr1	99	75.357	ENSMMOG00000000719	dbr1	99	75.179	Mola_mola
ENSGAFG00000001046	dbr1	99	55.636	ENSMODG00000018554	DBR1	100	55.657	Monodelphis_domestica
ENSGAFG00000001046	dbr1	99	74.159	ENSMALG00000022283	dbr1	97	74.513	Monopterus_albus
ENSGAFG00000001046	dbr1	98	57.222	MGP_CAROLIEiJ_G0032564	Dbr1	98	66.667	Mus_caroli
ENSGAFG00000001046	dbr1	99	56.044	ENSMUSG00000032469	Dbr1	98	66.667	Mus_musculus
ENSGAFG00000001046	dbr1	99	56.227	MGP_PahariEiJ_G0015433	Dbr1	98	66.667	Mus_pahari
ENSGAFG00000001046	dbr1	99	56.490	MGP_SPRETEiJ_G0033708	Dbr1	98	66.667	Mus_spretus
ENSGAFG00000001046	dbr1	98	56.192	ENSMPUG00000009230	DBR1	99	55.657	Mustela_putorius_furo
ENSGAFG00000001046	dbr1	98	56.007	ENSMLUG00000026117	DBR1	99	55.009	Myotis_lucifugus
ENSGAFG00000001046	dbr1	99	54.880	ENSNGAG00000003518	Dbr1	99	54.880	Nannospalax_galili
ENSGAFG00000001046	dbr1	100	76.523	ENSNBRG00000016318	dbr1	100	77.679	Neolamprologus_brichardi
ENSGAFG00000001046	dbr1	98	55.351	ENSNLEG00000032263	DBR1	97	55.064	Nomascus_leucogenys
ENSGAFG00000001046	dbr1	99	56.747	ENSMEUG00000009188	DBR1	99	56.562	Notamacropus_eugenii
ENSGAFG00000001046	dbr1	93	51.181	ENSOPRG00000016510	DBR1	99	50.787	Ochotona_princeps
ENSGAFG00000001046	dbr1	99	55.009	ENSODEG00000018178	DBR1	99	54.827	Octodon_degus
ENSGAFG00000001046	dbr1	100	75.623	ENSONIG00000013801	dbr1	100	77.758	Oreochromis_niloticus
ENSGAFG00000001046	dbr1	88	53.785	ENSOANG00000007783	DBR1	100	55.758	Ornithorhynchus_anatinus
ENSGAFG00000001046	dbr1	93	54.795	ENSOCUG00000015129	DBR1	89	54.776	Oryctolagus_cuniculus
ENSGAFG00000001046	dbr1	100	75.696	ENSORLG00015001112	dbr1	99	75.322	Oryzias_latipes_hsok
ENSGAFG00000001046	dbr1	100	75.046	ENSOMEG00000000857	dbr1	99	74.679	Oryzias_melastigma
ENSGAFG00000001046	dbr1	98	55.288	ENSOGAG00000033095	DBR1	99	54.827	Otolemur_garnettii
ENSGAFG00000001046	dbr1	99	54.015	ENSOARG00000007589	DBR1	99	53.650	Ovis_aries
ENSGAFG00000001046	dbr1	98	55.720	ENSPPAG00000031137	DBR1	99	55.191	Pan_paniscus
ENSGAFG00000001046	dbr1	98	56.562	ENSPPRG00000013629	DBR1	99	56.022	Panthera_pardus
ENSGAFG00000001046	dbr1	96	55.955	ENSPTIG00000012674	DBR1	98	55.307	Panthera_tigris_altaica
ENSGAFG00000001046	dbr1	98	55.904	ENSPTRG00000015441	DBR1	99	55.373	Pan_troglodytes
ENSGAFG00000001046	dbr1	98	55.722	ENSPANG00000012664	DBR1	99	55.617	Papio_anubis
ENSGAFG00000001046	dbr1	99	65.734	ENSPKIG00000000310	dbr1	99	65.965	Paramormyrops_kingsleyae
ENSGAFG00000001046	dbr1	88	56.394	ENSPSIG00000015486	DBR1	100	56.184	Pelodiscus_sinensis
ENSGAFG00000001046	dbr1	98	56.667	ENSPEMG00000020602	Dbr1	98	56.490	Peromyscus_maniculatus_bairdii
ENSGAFG00000001046	dbr1	70	58.995	ENSPMAG00000008620	dbr1	99	58.995	Petromyzon_marinus
ENSGAFG00000001046	dbr1	99	55.776	ENSPCIG00000006494	DBR1	100	55.941	Phascolarctos_cinereus
ENSGAFG00000001046	dbr1	69	94.906	ENSPLAG00000002421	-	100	94.906	Poecilia_latipinna
ENSGAFG00000001046	dbr1	100	96.097	ENSPLAG00000011665	dbr1	100	96.097	Poecilia_latipinna
ENSGAFG00000001046	dbr1	100	94.249	ENSPMEG00000010080	dbr1	100	95.547	Poecilia_mexicana
ENSGAFG00000001046	dbr1	70	92.021	ENSPMEG00000020884	-	94	93.651	Poecilia_mexicana
ENSGAFG00000001046	dbr1	100	93.911	ENSPREG00000020157	dbr1	100	95.203	Poecilia_reticulata
ENSGAFG00000001046	dbr1	98	55.904	ENSPPYG00000014139	DBR1	99	55.373	Pongo_abelii
ENSGAFG00000001046	dbr1	72	64.524	ENSPCAG00000012956	DBR1	99	64.524	Procavia_capensis
ENSGAFG00000001046	dbr1	98	55.844	ENSPCOG00000016894	DBR1	99	54.945	Propithecus_coquereli
ENSGAFG00000001046	dbr1	98	48.513	ENSPVAG00000007713	DBR1	99	48.440	Pteropus_vampyrus
ENSGAFG00000001046	dbr1	100	76.157	ENSPNYG00000015453	dbr1	100	78.393	Pundamilia_nyererei
ENSGAFG00000001046	dbr1	99	64.298	ENSPNAG00000025595	dbr1	99	66.841	Pygocentrus_nattereri
ENSGAFG00000001046	dbr1	99	55.576	ENSRNOG00000014588	Dbr1	99	55.393	Rattus_norvegicus
ENSGAFG00000001046	dbr1	98	55.784	ENSRBIG00000045002	DBR1	99	55.617	Rhinopithecus_bieti
ENSGAFG00000001046	dbr1	98	55.904	ENSRROG00000044819	DBR1	99	55.617	Rhinopithecus_roxellana
ENSGAFG00000001046	dbr1	54	38.889	YKL149C	DBR1	83	39.181	Saccharomyces_cerevisiae
ENSGAFG00000001046	dbr1	98	56.697	ENSSBOG00000032048	DBR1	99	56.044	Saimiri_boliviensis_boliviensis
ENSGAFG00000001046	dbr1	99	56.856	ENSSHAG00000006752	DBR1	100	56.624	Sarcophilus_harrisii
ENSGAFG00000001046	dbr1	99	68.182	ENSSFOG00015011410	dbr1	99	68.182	Scleropages_formosus
ENSGAFG00000001046	dbr1	99	75.313	ENSSMAG00000016078	dbr1	99	77.996	Scophthalmus_maximus
ENSGAFG00000001046	dbr1	99	78.269	ENSSDUG00000017849	dbr1	99	79.152	Seriola_dumerili
ENSGAFG00000001046	dbr1	99	78.014	ENSSLDG00000019891	dbr1	99	78.546	Seriola_lalandi_dorsalis
ENSGAFG00000001046	dbr1	51	71.622	ENSSARG00000003148	-	74	71.622	Sorex_araneus
ENSGAFG00000001046	dbr1	100	51.091	ENSSARG00000009558	-	78	59.102	Sorex_araneus
ENSGAFG00000001046	dbr1	93	53.861	ENSSPUG00000004724	DBR1	97	53.663	Sphenodon_punctatus
ENSGAFG00000001046	dbr1	100	82.130	ENSSPAG00000016892	dbr1	100	80.866	Stegastes_partitus
ENSGAFG00000001046	dbr1	99	56.673	ENSSSCG00000031098	DBR1	99	56.307	Sus_scrofa
ENSGAFG00000001046	dbr1	96	54.924	ENSTGUG00000007073	DBR1	100	54.545	Taeniopygia_guttata
ENSGAFG00000001046	dbr1	100	71.964	ENSTRUG00000021594	dbr1	99	70.996	Takifugu_rubripes
ENSGAFG00000001046	dbr1	99	72.022	ENSTNIG00000006710	dbr1	100	72.252	Tetraodon_nigroviridis
ENSGAFG00000001046	dbr1	99	54.945	ENSTTRG00000004020	DBR1	99	54.396	Tursiops_truncatus
ENSGAFG00000001046	dbr1	99	55.678	ENSUAMG00000004639	DBR1	99	54.945	Ursus_americanus
ENSGAFG00000001046	dbr1	98	55.659	ENSUMAG00000015012	DBR1	99	54.762	Ursus_maritimus
ENSGAFG00000001046	dbr1	99	51.376	ENSVPAG00000011711	DBR1	99	51.376	Vicugna_pacos
ENSGAFG00000001046	dbr1	98	55.370	ENSVVUG00000026604	DBR1	99	54.845	Vulpes_vulpes
ENSGAFG00000001046	dbr1	99	60.367	ENSXETG00000027491	dbr1	99	60.367	Xenopus_tropicalis
ENSGAFG00000001046	dbr1	100	96.481	ENSXCOG00000018078	dbr1	100	96.481	Xiphophorus_couchianus
ENSGAFG00000001046	dbr1	100	97.032	ENSXMAG00000007311	dbr1	100	97.032	Xiphophorus_maculatus