EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001117 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10049 bases
Position: chrNHOQ01002850.1:778189-788237
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001590	HRDC	PF00570.23	2e-14	1	1
ENSGAFP00000001582	HRDC	PF00570.23	2.2e-14	1	1
ENSGAFP00000001590	BDHCT	PF08072.11	5.7e-20	1	1
ENSGAFP00000001582	BDHCT	PF08072.11	6.1e-20	1	1
ENSGAFP00000001590	DEAD	PF00270.29	2.6e-17	1	1
ENSGAFP00000001582	DEAD	PF00270.29	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001607	-	4487	-	ENSGAFP00000001590	1298 (aa)	-	-
ENSGAFT00000001599	-	4697	-	ENSGAFP00000001582	1368 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001117	blm	63	65.173	ENSG00000197299	BLM	54	73.566	Homo_sapiens
ENSGAFG00000001117	blm	94	81.081	ENSAPOG00000017966	blm	100	70.538	Acanthochromis_polyacanthus
ENSGAFG00000001117	blm	59	64.450	ENSAMEG00000013843	BLM	55	64.103	Ailuropoda_melanoleuca
ENSGAFG00000001117	blm	98	75.166	ENSACIG00000023762	blm	100	71.196	Amphilophus_citrinellus
ENSGAFG00000001117	blm	100	77.027	ENSAOCG00000003318	blm	96	77.027	Amphiprion_ocellaris
ENSGAFG00000001117	blm	100	71.293	ENSAPEG00000018105	blm	100	69.657	Amphiprion_percula
ENSGAFG00000001117	blm	99	70.164	ENSATEG00000006421	blm	100	69.807	Anabas_testudineus
ENSGAFG00000001117	blm	84	51.956	ENSAPLG00000006878	BLM	69	62.262	Anas_platyrhynchos
ENSGAFG00000001117	blm	63	65.179	ENSACAG00000014275	BLM	64	65.083	Anolis_carolinensis
ENSGAFG00000001117	blm	66	62.927	ENSANAG00000038415	BLM	56	69.829	Aotus_nancymaae
ENSGAFG00000001117	blm	100	70.506	ENSACLG00000020354	blm	100	70.344	Astatotilapia_calliptera
ENSGAFG00000001117	blm	99	55.182	ENSAMXG00000016970	blm	87	71.934	Astyanax_mexicanus
ENSGAFG00000001117	blm	51	78.591	ENSBTAG00000020301	BLM	51	78.591	Bos_taurus
ENSGAFG00000001117	blm	62	36.406	WBGene00001865	him-6	72	39.353	Caenorhabditis_elegans
ENSGAFG00000001117	blm	63	65.685	ENSCJAG00000009803	BLM	54	73.770	Callithrix_jacchus
ENSGAFG00000001117	blm	62	63.139	ENSCAFG00000012385	BLM	58	62.728	Canis_familiaris
ENSGAFG00000001117	blm	62	63.139	ENSCAFG00020016111	BLM	92	64.621	Canis_lupus_dingo
ENSGAFG00000001117	blm	51	78.591	ENSCHIG00000010329	BLM	51	78.591	Capra_hircus
ENSGAFG00000001117	blm	65	64.578	ENSTSYG00000012368	BLM	56	72.541	Carlito_syrichta
ENSGAFG00000001117	blm	63	69.352	ENSCAPG00000017976	BLM	69	69.352	Cavia_aperea
ENSGAFG00000001117	blm	63	65.301	ENSCCAG00000023069	BLM	55	73.566	Cebus_capucinus
ENSGAFG00000001117	blm	63	65.045	ENSCATG00000040609	BLM	75	75.082	Cercocebus_atys
ENSGAFG00000001117	blm	99	45.994	ENSCLAG00000012111	BLM	59	62.275	Chinchilla_lanigera
ENSGAFG00000001117	blm	63	65.045	ENSCSAG00000017040	BLM	58	65.173	Chlorocebus_sabaeus
ENSGAFG00000001117	blm	53	59.722	ENSCHOG00000006255	BLM	50	59.722	Choloepus_hoffmanni
ENSGAFG00000001117	blm	87	51.118	ENSCPBG00000025000	BLM	78	64.540	Chrysemys_picta_bellii
ENSGAFG00000001117	blm	63	62.738	ENSCGRG00001024897	Blm	60	62.322	Cricetulus_griseus_chok1gshd
ENSGAFG00000001117	blm	95	66.824	ENSCSEG00000013483	blm	99	65.292	Cynoglossus_semilaevis
ENSGAFG00000001117	blm	76	77.293	ENSCVAG00000017583	blm	97	76.650	Cyprinodon_variegatus
ENSGAFG00000001117	blm	99	57.113	ENSDARG00000077089	blm	100	57.073	Danio_rerio
ENSGAFG00000001117	blm	63	64.240	ENSDNOG00000010159	BLM	58	64.368	Dasypus_novemcinctus
ENSGAFG00000001117	blm	62	62.349	ENSDORG00000011033	Blm	79	62.349	Dipodomys_ordii
ENSGAFG00000001117	blm	54	42.371	FBgn0002906	Blm	52	40.852	Drosophila_melanogaster
ENSGAFG00000001117	blm	62	59.152	ENSEASG00005006727	BLM	58	59.008	Equus_asinus_asinus
ENSGAFG00000001117	blm	59	64.744	ENSECAG00000011405	BLM	55	64.827	Equus_caballus
ENSGAFG00000001117	blm	67	63.857	ENSEEUG00000001434	BLM	64	63.427	Erinaceus_europaeus
ENSGAFG00000001117	blm	93	73.585	ENSELUG00000019098	blm	85	73.585	Esox_lucius
ENSGAFG00000001117	blm	80	53.519	ENSFALG00000010981	BLM	67	62.515	Ficedula_albicollis
ENSGAFG00000001117	blm	56	66.355	ENSFDAG00000012658	BLM	55	66.355	Fukomys_damarensis
ENSGAFG00000001117	blm	100	79.971	ENSFHEG00000002553	blm	100	79.251	Fundulus_heteroclitus
ENSGAFG00000001117	blm	99	59.120	ENSGMOG00000016431	blm	98	69.697	Gadus_morhua
ENSGAFG00000001117	blm	99	64.948	ENSGACG00000010863	blm	100	88.258	Gasterosteus_aculeatus
ENSGAFG00000001117	blm	68	56.277	ENSGAGG00000005383	BLM	70	66.962	Gopherus_agassizii
ENSGAFG00000001117	blm	63	64.917	ENSGGOG00000007710	BLM	75	75.082	Gorilla_gorilla
ENSGAFG00000001117	blm	100	81.081	ENSHBUG00000015943	blm	96	81.081	Haplochromis_burtoni
ENSGAFG00000001117	blm	81	52.694	ENSHGLG00000013231	BLM	62	63.822	Heterocephalus_glaber_female
ENSGAFG00000001117	blm	79	68.370	ENSHCOG00000011455	blm	100	67.826	Hippocampus_comes
ENSGAFG00000001117	blm	79	62.888	ENSIPUG00000000529	blm	76	71.429	Ictalurus_punctatus
ENSGAFG00000001117	blm	59	65.306	ENSSTOG00000005000	BLM	55	65.128	Ictidomys_tridecemlineatus
ENSGAFG00000001117	blm	51	77.507	ENSJJAG00000016322	Blm	68	77.507	Jaculus_jaculus
ENSGAFG00000001117	blm	100	77.742	ENSKMAG00000016608	blm	100	75.503	Kryptolebias_marmoratus
ENSGAFG00000001117	blm	63	78.365	ENSLBEG00000018729	blm	96	78.762	Labrus_bergylta
ENSGAFG00000001117	blm	60	69.114	ENSLACG00000006490	BLM	54	68.734	Latimeria_chalumnae
ENSGAFG00000001117	blm	92	60.417	ENSLOCG00000014302	blm	89	68.685	Lepisosteus_oculatus
ENSGAFG00000001117	blm	63	65.173	ENSMFAG00000042982	BLM	75	75.410	Macaca_fascicularis
ENSGAFG00000001117	blm	63	65.173	ENSMMUG00000019526	BLM	75	75.410	Macaca_mulatta
ENSGAFG00000001117	blm	59	64.917	ENSMNEG00000031251	BLM	75	75.082	Macaca_nemestrina
ENSGAFG00000001117	blm	62	61.410	ENSMLEG00000032934	BLM	57	61.410	Mandrillus_leucophaeus
ENSGAFG00000001117	blm	100	70.842	ENSMAMG00000008726	blm	100	70.461	Mastacembelus_armatus
ENSGAFG00000001117	blm	100	69.404	ENSMZEG00005022323	blm	100	69.474	Maylandia_zebra
ENSGAFG00000001117	blm	87	62.293	ENSMAUG00000008953	Blm	88	62.678	Mesocricetus_auratus
ENSGAFG00000001117	blm	55	73.770	ENSMICG00000034442	BLM	56	73.770	Microcebus_murinus
ENSGAFG00000001117	blm	59	66.752	ENSMOCG00000016367	Blm	55	66.538	Microtus_ochrogaster
ENSGAFG00000001117	blm	100	68.198	ENSMMOG00000006959	blm	100	67.552	Mola_mola
ENSGAFG00000001117	blm	99	45.473	ENSMODG00000019449	BLM	59	61.130	Monodelphis_domestica
ENSGAFG00000001117	blm	100	71.795	ENSMALG00000007323	blm	96	75.342	Monopterus_albus
ENSGAFG00000001117	blm	59	65.161	MGP_CAROLIEiJ_G0029907	Blm	55	64.987	Mus_caroli
ENSGAFG00000001117	blm	59	65.335	ENSMUSG00000030528	Blm	54	65.335	Mus_musculus
ENSGAFG00000001117	blm	59	65.851	MGP_PahariEiJ_G0013129	Blm	55	65.633	Mus_pahari
ENSGAFG00000001117	blm	59	65.508	MGP_SPRETEiJ_G0031009	Blm	55	65.508	Mus_spretus
ENSGAFG00000001117	blm	54	67.780	ENSMPUG00000015657	BLM	58	67.780	Mustela_putorius_furo
ENSGAFG00000001117	blm	61	63.814	ENSMLUG00000014697	BLM	57	63.447	Myotis_lucifugus
ENSGAFG00000001117	blm	59	64.948	ENSNGAG00000001275	Blm	55	64.820	Nannospalax_galili
ENSGAFG00000001117	blm	100	71.587	ENSNBRG00000019702	blm	100	69.761	Neolamprologus_brichardi
ENSGAFG00000001117	blm	63	62.484	ENSNLEG00000012087	BLM	74	60.814	Nomascus_leucogenys
ENSGAFG00000001117	blm	84	48.632	ENSMEUG00000007253	BLM	54	61.886	Notamacropus_eugenii
ENSGAFG00000001117	blm	55	65.042	ENSOPRG00000011667	BLM	51	64.624	Ochotona_princeps
ENSGAFG00000001117	blm	78	50.716	ENSODEG00000015373	BLM	80	56.954	Octodon_degus
ENSGAFG00000001117	blm	100	69.195	ENSONIG00000015193	blm	100	67.675	Oreochromis_niloticus
ENSGAFG00000001117	blm	58	65.155	ENSOANG00000009316	-	100	64.637	Ornithorhynchus_anatinus
ENSGAFG00000001117	blm	99	79.730	ENSORLG00000008110	blm	96	79.730	Oryzias_latipes
ENSGAFG00000001117	blm	99	74.980	ENSORLG00020004812	blm	96	81.081	Oryzias_latipes_hni
ENSGAFG00000001117	blm	99	81.081	ENSORLG00015018640	blm	96	81.081	Oryzias_latipes_hsok
ENSGAFG00000001117	blm	99	81.081	ENSOMEG00000023545	blm	96	81.081	Oryzias_melastigma
ENSGAFG00000001117	blm	84	51.230	ENSOGAG00000005708	BLM	55	62.406	Otolemur_garnettii
ENSGAFG00000001117	blm	63	65.429	ENSPPAG00000032173	BLM	54	73.770	Pan_paniscus
ENSGAFG00000001117	blm	74	64.623	ENSPPRG00000002471	BLM	66	72.802	Panthera_pardus
ENSGAFG00000001117	blm	62	65.256	ENSPTRG00000007460	BLM	54	73.717	Pan_troglodytes
ENSGAFG00000001117	blm	63	65.173	ENSPANG00000018572	BLM	75	75.410	Papio_anubis
ENSGAFG00000001117	blm	74	68.560	ENSPMGG00000006629	blm	100	69.168	Periophthalmus_magnuspinnatus
ENSGAFG00000001117	blm	50	63.190	ENSPMAG00000000445	blm	88	63.553	Petromyzon_marinus
ENSGAFG00000001117	blm	84	50.775	ENSPCIG00000006609	BLM	58	61.457	Phascolarctos_cinereus
ENSGAFG00000001117	blm	100	94.234	ENSPFOG00000005059	blm	100	94.234	Poecilia_formosa
ENSGAFG00000001117	blm	100	94.161	ENSPLAG00000017344	blm	100	94.161	Poecilia_latipinna
ENSGAFG00000001117	blm	100	94.234	ENSPMEG00000000321	blm	100	94.234	Poecilia_mexicana
ENSGAFG00000001117	blm	100	92.852	ENSPREG00000007715	blm	100	92.560	Poecilia_reticulata
ENSGAFG00000001117	blm	62	64.149	ENSPPYG00000006784	BLM	55	64.277	Pongo_abelii
ENSGAFG00000001117	blm	62	60.843	ENSPCAG00000008960	BLM	59	60.602	Procavia_capensis
ENSGAFG00000001117	blm	87	58.140	ENSPCOG00000000439	BLM	56	58.140	Propithecus_coquereli
ENSGAFG00000001117	blm	70	75.748	ENSPVAG00000011642	BLM	59	75.748	Pteropus_vampyrus
ENSGAFG00000001117	blm	100	62.708	ENSPNYG00000010956	blm	100	61.544	Pundamilia_nyererei
ENSGAFG00000001117	blm	100	57.252	ENSPNAG00000011714	blm	100	57.103	Pygocentrus_nattereri
ENSGAFG00000001117	blm	59	65.128	ENSRNOG00000011213	Blm	55	65.128	Rattus_norvegicus
ENSGAFG00000001117	blm	59	64.450	ENSRBIG00000029656	BLM	75	75.082	Rhinopithecus_bieti
ENSGAFG00000001117	blm	59	64.450	ENSRROG00000037871	BLM	75	75.082	Rhinopithecus_roxellana
ENSGAFG00000001117	blm	53	73.156	ENSSBOG00000030957	BLM	54	73.156	Saimiri_boliviensis_boliviensis
ENSGAFG00000001117	blm	99	44.715	ENSSHAG00000007988	BLM	61	61.475	Sarcophilus_harrisii
ENSGAFG00000001117	blm	80	63.567	ENSSFOG00015015462	blm	68	71.412	Scleropages_formosus
ENSGAFG00000001117	blm	100	69.484	ENSSMAG00000001120	blm	100	69.484	Scophthalmus_maximus
ENSGAFG00000001117	blm	100	77.027	ENSSDUG00000010955	blm	96	77.027	Seriola_dumerili
ENSGAFG00000001117	blm	100	79.730	ENSSLDG00000000634	blm	96	79.730	Seriola_lalandi_dorsalis
ENSGAFG00000001117	blm	59	59.923	ENSSARG00000006398	BLM	59	60.077	Sorex_araneus
ENSGAFG00000001117	blm	79	53.962	ENSSPUG00000000013	BLM	69	64.221	Sphenodon_punctatus
ENSGAFG00000001117	blm	99	73.415	ENSSPAG00000013999	blm	99	70.480	Stegastes_partitus
ENSGAFG00000001117	blm	68	65.256	ENSSSCG00000001816	BLM	64	67.635	Sus_scrofa
ENSGAFG00000001117	blm	84	46.447	ENSTGUG00000009959	-	84	55.437	Taeniopygia_guttata
ENSGAFG00000001117	blm	99	68.919	ENSTRUG00000019860	blm	99	64.505	Takifugu_rubripes
ENSGAFG00000001117	blm	99	64.103	ENSTNIG00000019246	blm	99	64.223	Tetraodon_nigroviridis
ENSGAFG00000001117	blm	59	65.424	ENSTTRG00000016386	BLM	55	64.781	Tursiops_truncatus
ENSGAFG00000001117	blm	59	64.736	ENSUMAG00000009105	BLM	93	68.331	Ursus_maritimus
ENSGAFG00000001117	blm	71	61.332	ENSVPAG00000000085	BLM	64	61.332	Vicugna_pacos
ENSGAFG00000001117	blm	65	64.609	ENSVVUG00000006402	BLM	65	64.011	Vulpes_vulpes
ENSGAFG00000001117	blm	99	47.350	ENSXETG00000007847	blm	55	67.350	Xenopus_tropicalis
ENSGAFG00000001117	blm	100	91.951	ENSXCOG00000020227	blm	100	91.734	Xiphophorus_couchianus
ENSGAFG00000001117	blm	100	94.883	ENSXMAG00000002951	blm	100	94.883	Xiphophorus_maculatus