EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000001164 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 35846 bases
Position: chrNHOQ01001472.1:1400826-1436671
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001709	ResIII	PF04851.15	1.3e-07	1	1
ENSGAFP00000001709	BRK	PF07533.16	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001728	SMARCA2-201	4539	-	ENSGAFP00000001709	1512 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000001164	SMARCA2	80	88.889	ENSGAFG00000014900	smarca4a	94	71.103
ENSGAFG00000001164	SMARCA2	92	84.946	ENSGAFG00000008827	-	94	68.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001164	SMARCA2	93	76.443	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSGAFG00000001164	SMARCA2	95	83.432	ENSAPOG00000002641	SMARCA2	95	88.070	Acanthochromis_polyacanthus
ENSGAFG00000001164	SMARCA2	71	96.667	ENSAMEG00000012325	SMARCA2	86	96.667	Ailuropoda_melanoleuca
ENSGAFG00000001164	SMARCA2	95	83.058	ENSACIG00000015607	SMARCA2	95	83.267	Amphilophus_citrinellus
ENSGAFG00000001164	SMARCA2	95	83.498	ENSAOCG00000009647	-	95	83.566	Amphiprion_ocellaris
ENSGAFG00000001164	SMARCA2	95	83.300	ENSAPEG00000007646	SMARCA2	93	87.585	Amphiprion_percula
ENSGAFG00000001164	SMARCA2	95	83.498	ENSATEG00000006916	SMARCA2	94	83.630	Anabas_testudineus
ENSGAFG00000001164	SMARCA2	83	76.064	ENSAPLG00000013873	SMARCA2	71	82.013	Anas_platyrhynchos
ENSGAFG00000001164	SMARCA2	91	75.466	ENSACAG00000002423	SMARCA2	95	75.050	Anolis_carolinensis
ENSGAFG00000001164	SMARCA2	93	76.615	ENSANAG00000026498	SMARCA2	93	79.641	Aotus_nancymaae
ENSGAFG00000001164	SMARCA2	95	83.712	ENSACLG00000004248	SMARCA2	95	83.856	Astatotilapia_calliptera
ENSGAFG00000001164	SMARCA2	95	79.362	ENSAMXG00000012404	smarca2	96	78.510	Astyanax_mexicanus
ENSGAFG00000001164	SMARCA2	93	76.275	ENSBTAG00000007494	SMARCA2	95	76.435	Bos_taurus
ENSGAFG00000001164	SMARCA2	93	76.578	ENSCJAG00000010710	SMARCA2	94	79.285	Callithrix_jacchus
ENSGAFG00000001164	SMARCA2	89	96.667	ENSCAFG00000002013	SMARCA2	95	76.197	Canis_familiaris
ENSGAFG00000001164	SMARCA2	73	83.040	ENSCAFG00020026802	SMARCA2	94	83.304	Canis_lupus_dingo
ENSGAFG00000001164	SMARCA2	93	76.275	ENSCHIG00000025863	SMARCA2	95	76.435	Capra_hircus
ENSGAFG00000001164	SMARCA2	93	73.634	ENSTSYG00000003858	SMARCA2	95	76.680	Carlito_syrichta
ENSGAFG00000001164	SMARCA2	93	75.377	ENSCAPG00000002890	SMARCA2	95	75.521	Cavia_aperea
ENSGAFG00000001164	SMARCA2	93	76.459	ENSCPOG00000005475	SMARCA2	95	76.846	Cavia_porcellus
ENSGAFG00000001164	SMARCA2	93	76.818	ENSCCAG00000030636	SMARCA2	93	79.865	Cebus_capucinus
ENSGAFG00000001164	SMARCA2	93	75.829	ENSCATG00000031470	SMARCA2	95	78.754	Cercocebus_atys
ENSGAFG00000001164	SMARCA2	93	76.119	ENSCLAG00000014484	SMARCA2	95	76.576	Chinchilla_lanigera
ENSGAFG00000001164	SMARCA2	91	76.085	ENSCSAG00000008650	SMARCA2	99	76.538	Chlorocebus_sabaeus
ENSGAFG00000001164	SMARCA2	66	84.559	ENSCHOG00000004316	SMARCA2	86	73.974	Choloepus_hoffmanni
ENSGAFG00000001164	SMARCA2	89	96.667	ENSCPBG00000025463	SMARCA2	88	96.667	Chrysemys_picta_bellii
ENSGAFG00000001164	SMARCA2	93	76.683	ENSCANG00000039597	SMARCA2	93	79.207	Colobus_angolensis_palliatus
ENSGAFG00000001164	SMARCA2	93	71.301	ENSCGRG00001002323	Smarca2	95	71.219	Cricetulus_griseus_chok1gshd
ENSGAFG00000001164	SMARCA2	95	80.282	ENSCSEG00000019311	SMARCA2	95	80.134	Cynoglossus_semilaevis
ENSGAFG00000001164	SMARCA2	86	90.498	ENSCVAG00000016571	SMARCA2	98	90.279	Cyprinodon_variegatus
ENSGAFG00000001164	SMARCA2	92	92.222	ENSDARG00000008904	smarca2	95	77.866	Danio_rerio
ENSGAFG00000001164	SMARCA2	93	76.106	ENSDNOG00000006402	SMARCA2	95	76.291	Dasypus_novemcinctus
ENSGAFG00000001164	SMARCA2	93	76.828	ENSDORG00000014832	Smarca2	95	76.580	Dipodomys_ordii
ENSGAFG00000001164	SMARCA2	76	60.133	FBgn0000212	brm	73	59.950	Drosophila_melanogaster
ENSGAFG00000001164	SMARCA2	95	67.076	ENSEBUG00000011442	-	97	65.841	Eptatretus_burgeri
ENSGAFG00000001164	SMARCA2	82	68.868	ENSEBUG00000002449	-	95	59.197	Eptatretus_burgeri
ENSGAFG00000001164	SMARCA2	93	75.867	ENSEASG00005010312	SMARCA2	95	76.365	Equus_asinus_asinus
ENSGAFG00000001164	SMARCA2	56	94.118	ENSEEUG00000015540	-	59	94.118	Erinaceus_europaeus
ENSGAFG00000001164	SMARCA2	95	76.637	ENSELUG00000010318	smarca2	99	74.430	Esox_lucius
ENSGAFG00000001164	SMARCA2	89	96.667	ENSFCAG00000001568	SMARCA2	95	76.365	Felis_catus
ENSGAFG00000001164	SMARCA2	91	75.275	ENSFALG00000010416	SMARCA2	94	76.906	Ficedula_albicollis
ENSGAFG00000001164	SMARCA2	93	76.084	ENSFDAG00000010502	SMARCA2	94	75.989	Fukomys_damarensis
ENSGAFG00000001164	SMARCA2	95	88.709	ENSFHEG00000021250	SMARCA2	93	88.430	Fundulus_heteroclitus
ENSGAFG00000001164	SMARCA2	92	92.222	ENSGMOG00000014229	SMARCA2	96	76.109	Gadus_morhua
ENSGAFG00000001164	SMARCA2	89	96.667	ENSGALG00000010164	SMARCA2	89	96.667	Gallus_gallus
ENSGAFG00000001164	SMARCA2	95	80.647	ENSGACG00000014488	SMARCA2	96	80.185	Gasterosteus_aculeatus
ENSGAFG00000001164	SMARCA2	93	74.646	ENSGAGG00000024412	SMARCA2	95	75.780	Gopherus_agassizii
ENSGAFG00000001164	SMARCA2	84	81.436	ENSGGOG00000000513	SMARCA2	93	79.898	Gorilla_gorilla
ENSGAFG00000001164	SMARCA2	95	83.712	ENSHBUG00000006691	SMARCA2	95	83.201	Haplochromis_burtoni
ENSGAFG00000001164	SMARCA2	93	76.578	ENSHGLG00000005215	SMARCA2	95	76.312	Heterocephalus_glaber_female
ENSGAFG00000001164	SMARCA2	89	96.667	ENSHGLG00100010496	SMARCA2	95	76.181	Heterocephalus_glaber_male
ENSGAFG00000001164	SMARCA2	86	79.680	ENSHCOG00000015348	-	92	83.202	Hippocampus_comes
ENSGAFG00000001164	SMARCA2	95	77.785	ENSIPUG00000011060	smarca2	92	82.572	Ictalurus_punctatus
ENSGAFG00000001164	SMARCA2	89	96.667	ENSSTOG00000006812	SMARCA2	95	76.826	Ictidomys_tridecemlineatus
ENSGAFG00000001164	SMARCA2	93	76.639	ENSJJAG00000010867	Smarca2	95	76.330	Jaculus_jaculus
ENSGAFG00000001164	SMARCA2	95	83.497	ENSKMAG00000015844	-	95	83.604	Kryptolebias_marmoratus
ENSGAFG00000001164	SMARCA2	93	76.506	ENSLOCG00000011499	smarca2	77	80.627	Lepisosteus_oculatus
ENSGAFG00000001164	SMARCA2	93	74.932	ENSLAFG00000014061	SMARCA2	95	75.378	Loxodonta_africana
ENSGAFG00000001164	SMARCA2	93	75.592	ENSMFAG00000003814	SMARCA2	93	78.865	Macaca_fascicularis
ENSGAFG00000001164	SMARCA2	93	76.683	ENSMMUG00000015279	SMARCA2	95	77.230	Macaca_mulatta
ENSGAFG00000001164	SMARCA2	93	76.447	ENSMNEG00000041069	SMARCA2	94	79.612	Macaca_nemestrina
ENSGAFG00000001164	SMARCA2	74	81.447	ENSMLEG00000027418	SMARCA2	94	77.431	Mandrillus_leucophaeus
ENSGAFG00000001164	SMARCA2	95	82.430	ENSMAMG00000003056	SMARCA2	95	89.674	Mastacembelus_armatus
ENSGAFG00000001164	SMARCA2	95	83.712	ENSMZEG00005020709	SMARCA2	95	83.201	Maylandia_zebra
ENSGAFG00000001164	SMARCA2	75	63.804	ENSMGAG00000005160	-	99	58.946	Meleagris_gallopavo
ENSGAFG00000001164	SMARCA2	93	76.619	ENSMICG00000005162	SMARCA2	94	79.354	Microcebus_murinus
ENSGAFG00000001164	SMARCA2	93	76.981	ENSMOCG00000001611	Smarca2	95	76.795	Microtus_ochrogaster
ENSGAFG00000001164	SMARCA2	95	82.673	ENSMMOG00000014196	SMARCA2	96	83.151	Mola_mola
ENSGAFG00000001164	SMARCA2	91	75.635	ENSMODG00000003578	SMARCA2	95	76.080	Monodelphis_domestica
ENSGAFG00000001164	SMARCA2	95	85.695	ENSMALG00000009611	SMARCA2	95	85.493	Monopterus_albus
ENSGAFG00000001164	SMARCA2	93	76.423	MGP_CAROLIEiJ_G0022841	Smarca2	95	76.187	Mus_caroli
ENSGAFG00000001164	SMARCA2	93	76.475	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSGAFG00000001164	SMARCA2	93	76.547	MGP_PahariEiJ_G0014334	Smarca2	95	76.373	Mus_pahari
ENSGAFG00000001164	SMARCA2	77	80.000	MGP_SPRETEiJ_G0023759	Smarca2	91	87.879	Mus_spretus
ENSGAFG00000001164	SMARCA2	71	96.667	ENSMPUG00000005171	SMARCA2	82	96.667	Mustela_putorius_furo
ENSGAFG00000001164	SMARCA2	93	71.228	ENSMLUG00000002342	SMARCA2	78	75.060	Myotis_lucifugus
ENSGAFG00000001164	SMARCA2	93	75.270	ENSNGAG00000000108	Smarca2	95	75.033	Nannospalax_galili
ENSGAFG00000001164	SMARCA2	87	79.606	ENSNBRG00000017998	SMARCA2	94	82.090	Neolamprologus_brichardi
ENSGAFG00000001164	SMARCA2	89	96.667	ENSNLEG00000008575	SMARCA2	95	75.367	Nomascus_leucogenys
ENSGAFG00000001164	SMARCA2	88	95.652	ENSMEUG00000009812	SMARCA2	88	95.652	Notamacropus_eugenii
ENSGAFG00000001164	SMARCA2	74	75.781	ENSOPRG00000013474	SMARCA2	95	72.336	Ochotona_princeps
ENSGAFG00000001164	SMARCA2	93	75.625	ENSODEG00000005452	SMARCA2	94	76.008	Octodon_degus
ENSGAFG00000001164	SMARCA2	95	83.028	ENSONIG00000014163	SMARCA2	76	85.434	Oreochromis_niloticus
ENSGAFG00000001164	SMARCA2	74	81.356	ENSOCUG00000006320	SMARCA2	95	76.342	Oryctolagus_cuniculus
ENSGAFG00000001164	SMARCA2	95	81.956	ENSORLG00000020820	SMARCA2	95	86.738	Oryzias_latipes
ENSGAFG00000001164	SMARCA2	95	82.011	ENSORLG00015006289	SMARCA2	94	86.738	Oryzias_latipes_hsok
ENSGAFG00000001164	SMARCA2	95	83.021	ENSOMEG00000009736	-	97	82.015	Oryzias_melastigma
ENSGAFG00000001164	SMARCA2	75	80.570	ENSOGAG00000017053	SMARCA2	75	80.901	Otolemur_garnettii
ENSGAFG00000001164	SMARCA2	93	75.152	ENSOARG00000013265	SMARCA2	95	75.917	Ovis_aries
ENSGAFG00000001164	SMARCA2	86	81.459	ENSPPAG00000038717	SMARCA2	93	76.780	Pan_paniscus
ENSGAFG00000001164	SMARCA2	89	96.667	ENSPPRG00000001879	SMARCA2	95	76.263	Panthera_pardus
ENSGAFG00000001164	SMARCA2	93	75.665	ENSPTRG00000051168	SMARCA2	93	79.030	Pan_troglodytes
ENSGAFG00000001164	SMARCA2	93	73.187	ENSPANG00000025121	SMARCA2	95	72.866	Papio_anubis
ENSGAFG00000001164	SMARCA2	96	77.955	ENSPKIG00000018469	-	95	78.133	Paramormyrops_kingsleyae
ENSGAFG00000001164	SMARCA2	91	74.216	ENSPSIG00000006284	SMARCA2	95	75.166	Pelodiscus_sinensis
ENSGAFG00000001164	SMARCA2	93	78.819	ENSPMGG00000013696	-	95	79.090	Periophthalmus_magnuspinnatus
ENSGAFG00000001164	SMARCA2	93	75.853	ENSPEMG00000019821	Smarca2	95	75.697	Peromyscus_maniculatus_bairdii
ENSGAFG00000001164	SMARCA2	95	66.070	ENSPMAG00000005337	-	97	65.563	Petromyzon_marinus
ENSGAFG00000001164	SMARCA2	93	75.474	ENSPCIG00000015658	SMARCA2	95	75.981	Phascolarctos_cinereus
ENSGAFG00000001164	SMARCA2	98	87.492	ENSPFOG00000001856	SMARCA2	98	87.389	Poecilia_formosa
ENSGAFG00000001164	SMARCA2	98	87.556	ENSPLAG00000017829	SMARCA2	94	88.456	Poecilia_latipinna
ENSGAFG00000001164	SMARCA2	98	89.279	ENSPMEG00000001815	-	98	89.279	Poecilia_mexicana
ENSGAFG00000001164	SMARCA2	98	90.380	ENSPREG00000013800	SMARCA2	97	90.380	Poecilia_reticulata
ENSGAFG00000001164	SMARCA2	93	76.259	ENSPPYG00000019258	SMARCA2	95	76.749	Pongo_abelii
ENSGAFG00000001164	SMARCA2	71	95.652	ENSPCAG00000016969	SMARCA2	71	95.652	Procavia_capensis
ENSGAFG00000001164	SMARCA2	93	74.762	ENSPCOG00000025709	SMARCA2	94	76.940	Propithecus_coquereli
ENSGAFG00000001164	SMARCA2	87	96.667	ENSPVAG00000000901	SMARCA2	88	96.667	Pteropus_vampyrus
ENSGAFG00000001164	SMARCA2	93	87.342	ENSPNYG00000004533	SMARCA2	95	80.708	Pundamilia_nyererei
ENSGAFG00000001164	SMARCA2	95	78.694	ENSPNAG00000014635	smarca2	94	78.826	Pygocentrus_nattereri
ENSGAFG00000001164	SMARCA2	93	75.554	ENSRNOG00000011931	Smarca2	95	75.278	Rattus_norvegicus
ENSGAFG00000001164	SMARCA2	93	76.337	ENSRBIG00000038618	SMARCA2	94	78.593	Rhinopithecus_bieti
ENSGAFG00000001164	SMARCA2	93	76.323	ENSRROG00000019271	SMARCA2	94	79.058	Rhinopithecus_roxellana
ENSGAFG00000001164	SMARCA2	93	74.340	ENSSBOG00000034827	SMARCA2	95	75.502	Saimiri_boliviensis_boliviensis
ENSGAFG00000001164	SMARCA2	91	75.704	ENSSHAG00000007884	SMARCA2	95	76.013	Sarcophilus_harrisii
ENSGAFG00000001164	SMARCA2	86	82.322	ENSSFOG00015014870	SMARCA2	92	81.669	Scleropages_formosus
ENSGAFG00000001164	SMARCA2	92	94.444	ENSSMAG00000013707	SMARCA2	95	83.502	Scophthalmus_maximus
ENSGAFG00000001164	SMARCA2	93	97.000	ENSSDUG00000008852	-	94	85.165	Seriola_dumerili
ENSGAFG00000001164	SMARCA2	95	84.388	ENSSLDG00000025449	SMARCA2	95	84.590	Seriola_lalandi_dorsalis
ENSGAFG00000001164	SMARCA2	89	96.667	ENSSARG00000007888	SMARCA2	89	96.667	Sorex_araneus
ENSGAFG00000001164	SMARCA2	90	72.505	ENSSPUG00000001629	SMARCA2	93	73.169	Sphenodon_punctatus
ENSGAFG00000001164	SMARCA2	95	86.073	ENSSPAG00000020091	-	98	86.286	Stegastes_partitus
ENSGAFG00000001164	SMARCA2	93	75.799	ENSSSCG00000005232	SMARCA2	95	76.569	Sus_scrofa
ENSGAFG00000001164	SMARCA2	91	74.863	ENSTGUG00000005460	SMARCA2	95	75.498	Taeniopygia_guttata
ENSGAFG00000001164	SMARCA2	95	81.399	ENSTRUG00000015619	SMARCA2	95	81.395	Takifugu_rubripes
ENSGAFG00000001164	SMARCA2	62	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSGAFG00000001164	SMARCA2	89	96.667	ENSTTRG00000002033	SMARCA2	95	75.000	Tursiops_truncatus
ENSGAFG00000001164	SMARCA2	84	77.991	ENSUAMG00000024701	SMARCA2	95	76.523	Ursus_americanus
ENSGAFG00000001164	SMARCA2	81	95.556	ENSVPAG00000001204	SMARCA2	93	72.080	Vicugna_pacos
ENSGAFG00000001164	SMARCA2	73	81.627	ENSVVUG00000004598	SMARCA2	96	81.890	Vulpes_vulpes
ENSGAFG00000001164	SMARCA2	95	71.855	ENSXETG00000015299	smarca2	77	76.917	Xenopus_tropicalis
ENSGAFG00000001164	SMARCA2	87	95.833	ENSXCOG00000011073	SMARCA2	95	95.833	Xiphophorus_couchianus
ENSGAFG00000001164	SMARCA2	99	89.332	ENSXMAG00000015611	SMARCA2	98	89.332	Xiphophorus_maculatus