EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000001313 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: zgc:162879
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10782 bases
Position: chrNHOQ01002850.1:991031-1001812
Accession: ZDB-GENE-070424-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000001874	MMR_HSR1	PF01926.23	1.4e-07	1	1
ENSGAFP00000001888	MMR_HSR1	PF01926.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000001894	-	3160	-	ENSGAFP00000001874	655 (aa)	-	-
ENSGAFT00000001908	-	3077	-	ENSGAFP00000001888	655 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000001313	zgc:162879	99	35.028	ENSGAFG00000013735	rasef	97	34.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001313	zgc:162879	99	73.556	ENSAPOG00000008539	zgc:162879	99	73.556	Acanthochromis_polyacanthus
ENSGAFG00000001313	zgc:162879	100	74.471	ENSACIG00000023717	zgc:162879	100	74.471	Amphilophus_citrinellus
ENSGAFG00000001313	zgc:162879	87	68.330	ENSAOCG00000006210	zgc:162879	90	68.330	Amphiprion_ocellaris
ENSGAFG00000001313	zgc:162879	99	74.164	ENSAPEG00000017489	zgc:162879	99	74.164	Amphiprion_percula
ENSGAFG00000001313	zgc:162879	100	75.151	ENSATEG00000006102	zgc:162879	100	75.151	Anabas_testudineus
ENSGAFG00000001313	zgc:162879	100	72.139	ENSACLG00000021066	zgc:162879	100	71.299	Astatotilapia_calliptera
ENSGAFG00000001313	zgc:162879	100	58.036	ENSAMXG00000007430	zgc:162879	100	58.036	Astyanax_mexicanus
ENSGAFG00000001313	zgc:162879	85	57.194	ENSCSEG00000013699	zgc:162879	92	57.194	Cynoglossus_semilaevis
ENSGAFG00000001313	zgc:162879	99	80.061	ENSCVAG00000014510	zgc:162879	99	80.061	Cyprinodon_variegatus
ENSGAFG00000001313	zgc:162879	100	57.357	ENSDARG00000074163	zgc:162879	100	57.357	Danio_rerio
ENSGAFG00000001313	zgc:162879	90	59.638	ENSELUG00000019483	zgc:162879	97	59.638	Esox_lucius
ENSGAFG00000001313	zgc:162879	76	75.746	ENSFHEG00000022549	zgc:162879	100	75.547	Fundulus_heteroclitus
ENSGAFG00000001313	zgc:162879	100	67.391	ENSGACG00000010798	zgc:162879	99	67.391	Gasterosteus_aculeatus
ENSGAFG00000001313	zgc:162879	100	72.180	ENSHBUG00000016335	zgc:162879	100	72.180	Haplochromis_burtoni
ENSGAFG00000001313	zgc:162879	100	47.226	ENSHCOG00000012026	zgc:162879	99	54.967	Hippocampus_comes
ENSGAFG00000001313	zgc:162879	100	65.909	ENSKMAG00000016246	zgc:162879	100	66.364	Kryptolebias_marmoratus
ENSGAFG00000001313	zgc:162879	99	69.277	ENSLBEG00000006690	zgc:162879	100	69.277	Labrus_bergylta
ENSGAFG00000001313	zgc:162879	99	36.719	ENSLACG00000014082	-	99	41.721	Latimeria_chalumnae
ENSGAFG00000001313	zgc:162879	99	55.506	ENSLOCG00000014347	zgc:162879	98	55.506	Lepisosteus_oculatus
ENSGAFG00000001313	zgc:162879	100	69.592	ENSMAMG00000008875	zgc:162879	100	69.592	Mastacembelus_armatus
ENSGAFG00000001313	zgc:162879	100	71.988	ENSMZEG00005022256	zgc:162879	100	71.988	Maylandia_zebra
ENSGAFG00000001313	zgc:162879	100	64.199	ENSNBRG00000020110	zgc:162879	100	64.199	Neolamprologus_brichardi
ENSGAFG00000001313	zgc:162879	99	68.714	ENSONIG00000015165	zgc:162879	100	68.714	Oreochromis_niloticus
ENSGAFG00000001313	zgc:162879	99	63.830	ENSORLG00015017960	zgc:162879	99	63.830	Oryzias_latipes_hsok
ENSGAFG00000001313	zgc:162879	100	54.559	ENSPKIG00000020661	zgc:162879	100	54.559	Paramormyrops_kingsleyae
ENSGAFG00000001313	zgc:162879	100	92.683	ENSPFOG00000006354	zgc:162879	99	92.683	Poecilia_formosa
ENSGAFG00000001313	zgc:162879	100	92.683	ENSPLAG00000020643	zgc:162879	99	92.683	Poecilia_latipinna
ENSGAFG00000001313	zgc:162879	100	92.073	ENSPMEG00000014713	zgc:162879	100	92.073	Poecilia_mexicana
ENSGAFG00000001313	zgc:162879	100	65.152	ENSPNYG00000010530	zgc:162879	100	65.152	Pundamilia_nyererei
ENSGAFG00000001313	zgc:162879	100	56.909	ENSPNAG00000012022	zgc:162879	100	56.909	Pygocentrus_nattereri
ENSGAFG00000001313	zgc:162879	88	46.434	ENSSFOG00015023774	zgc:162879	95	46.434	Scleropages_formosus
ENSGAFG00000001313	zgc:162879	100	70.348	ENSSMAG00000001513	zgc:162879	99	71.292	Scophthalmus_maximus
ENSGAFG00000001313	zgc:162879	100	75.452	ENSSDUG00000011478	zgc:162879	100	75.452	Seriola_dumerili
ENSGAFG00000001313	zgc:162879	100	75.301	ENSSLDG00000000877	zgc:162879	100	75.301	Seriola_lalandi_dorsalis
ENSGAFG00000001313	zgc:162879	100	66.717	ENSSPAG00000010598	zgc:162879	99	67.226	Stegastes_partitus
ENSGAFG00000001313	zgc:162879	99	63.494	ENSTNIG00000019239	zgc:162879	99	63.494	Tetraodon_nigroviridis
ENSGAFG00000001313	zgc:162879	99	38.643	ENSXETG00000015491	rasef	98	38.643	Xenopus_tropicalis
ENSGAFG00000001313	zgc:162879	77	85.516	ENSXCOG00000020244	zgc:162879	100	85.913	Xiphophorus_couchianus
ENSGAFG00000001313	zgc:162879	100	95.427	ENSXMAG00000002846	zgc:162879	100	95.427	Xiphophorus_maculatus