EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001407 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9130 bases
Position: chrNHOQ01001000.1:14438991-14448120
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002071	Beta-Casp	PF10996.8	2.1e-21	1	1
ENSGAFP00000002071	Lactamase_B	PF00753.27	3.7e-05	1	1
ENSGAFP00000002071	RMMBL	PF07521.12	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002092	-	4302	-	ENSGAFP00000002071	787 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001407	cpsf2	100	85.425	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSGAFG00000001407	cpsf2	100	95.426	ENSAPOG00000001242	cpsf2	100	95.426	Acanthochromis_polyacanthus
ENSGAFG00000001407	cpsf2	100	94.924	ENSACIG00000009331	cpsf2	100	94.924	Amphilophus_citrinellus
ENSGAFG00000001407	cpsf2	100	96.188	ENSAOCG00000014095	cpsf2	100	96.188	Amphiprion_ocellaris
ENSGAFG00000001407	cpsf2	100	96.188	ENSAPEG00000009158	cpsf2	100	96.188	Amphiprion_percula
ENSGAFG00000001407	cpsf2	97	93.750	ENSATEG00000017644	cpsf2	99	93.624	Anabas_testudineus
ENSGAFG00000001407	cpsf2	100	85.190	ENSAPLG00000006330	CPSF2	100	85.190	Anas_platyrhynchos
ENSGAFG00000001407	cpsf2	100	85.044	ENSACAG00000009245	CPSF2	100	85.044	Anolis_carolinensis
ENSGAFG00000001407	cpsf2	100	85.678	ENSANAG00000022915	CPSF2	100	85.678	Aotus_nancymaae
ENSGAFG00000001407	cpsf2	100	89.354	ENSAMXG00000018696	cpsf2	100	89.354	Astyanax_mexicanus
ENSGAFG00000001407	cpsf2	100	85.551	ENSBTAG00000010227	CPSF2	100	85.551	Bos_taurus
ENSGAFG00000001407	cpsf2	100	41.852	WBGene00017313	cpsf-2	100	41.844	Caenorhabditis_elegans
ENSGAFG00000001407	cpsf2	100	85.678	ENSCJAG00000018069	CPSF2	100	85.678	Callithrix_jacchus
ENSGAFG00000001407	cpsf2	100	85.425	ENSCAFG00000010909	CPSF2	100	85.425	Canis_familiaris
ENSGAFG00000001407	cpsf2	100	85.425	ENSCAFG00020020670	CPSF2	100	85.425	Canis_lupus_dingo
ENSGAFG00000001407	cpsf2	100	85.551	ENSCHIG00000023848	CPSF2	100	85.551	Capra_hircus
ENSGAFG00000001407	cpsf2	100	85.805	ENSTSYG00000009036	CPSF2	100	85.805	Carlito_syrichta
ENSGAFG00000001407	cpsf2	100	85.551	ENSCPOG00000010899	CPSF2	100	85.551	Cavia_porcellus
ENSGAFG00000001407	cpsf2	100	85.678	ENSCCAG00000028088	CPSF2	100	85.678	Cebus_capucinus
ENSGAFG00000001407	cpsf2	100	85.551	ENSCATG00000030132	CPSF2	100	85.551	Cercocebus_atys
ENSGAFG00000001407	cpsf2	100	85.678	ENSCLAG00000012404	CPSF2	100	85.678	Chinchilla_lanigera
ENSGAFG00000001407	cpsf2	100	85.551	ENSCSAG00000011300	CPSF2	100	85.551	Chlorocebus_sabaeus
ENSGAFG00000001407	cpsf2	100	80.101	ENSCHOG00000012904	CPSF2	100	80.101	Choloepus_hoffmanni
ENSGAFG00000001407	cpsf2	100	85.298	ENSCPBG00000008766	CPSF2	97	85.298	Chrysemys_picta_bellii
ENSGAFG00000001407	cpsf2	100	52.985	ENSCING00000007881	-	100	52.788	Ciona_intestinalis
ENSGAFG00000001407	cpsf2	94	85.541	ENSCANG00000041651	CPSF2	100	85.521	Colobus_angolensis_palliatus
ENSGAFG00000001407	cpsf2	100	85.298	ENSCGRG00001006901	Cpsf2	100	85.298	Cricetulus_griseus_chok1gshd
ENSGAFG00000001407	cpsf2	100	85.298	ENSCGRG00000012416	Cpsf2	100	85.298	Cricetulus_griseus_crigri
ENSGAFG00000001407	cpsf2	100	93.147	ENSCSEG00000004116	cpsf2	100	93.147	Cynoglossus_semilaevis
ENSGAFG00000001407	cpsf2	100	98.221	ENSCVAG00000000095	cpsf2	100	98.221	Cyprinodon_variegatus
ENSGAFG00000001407	cpsf2	100	87.848	ENSDARG00000028971	cpsf2	100	87.848	Danio_rerio
ENSGAFG00000001407	cpsf2	100	85.551	ENSDNOG00000042757	CPSF2	100	85.551	Dasypus_novemcinctus
ENSGAFG00000001407	cpsf2	100	85.551	ENSDORG00000013709	Cpsf2	100	85.551	Dipodomys_ordii
ENSGAFG00000001407	cpsf2	100	53.894	FBgn0027873	Cpsf100	100	53.779	Drosophila_melanogaster
ENSGAFG00000001407	cpsf2	100	77.848	ENSETEG00000012123	CPSF2	100	77.848	Echinops_telfairi
ENSGAFG00000001407	cpsf2	52	75.795	ENSEBUG00000012098	cpsf2	93	75.795	Eptatretus_burgeri
ENSGAFG00000001407	cpsf2	89	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSGAFG00000001407	cpsf2	100	85.425	ENSECAG00000023935	CPSF2	100	85.425	Equus_caballus
ENSGAFG00000001407	cpsf2	100	88.945	ENSELUG00000008442	cpsf2	100	88.945	Esox_lucius
ENSGAFG00000001407	cpsf2	100	85.425	ENSFCAG00000007886	CPSF2	100	85.425	Felis_catus
ENSGAFG00000001407	cpsf2	100	85.279	ENSFALG00000002412	CPSF2	100	85.279	Ficedula_albicollis
ENSGAFG00000001407	cpsf2	100	85.425	ENSFDAG00000006327	CPSF2	100	85.425	Fukomys_damarensis
ENSGAFG00000001407	cpsf2	96	96.859	ENSFHEG00000015465	cpsf2	98	96.859	Fundulus_heteroclitus
ENSGAFG00000001407	cpsf2	100	89.646	ENSGMOG00000008761	cpsf2	100	89.646	Gadus_morhua
ENSGAFG00000001407	cpsf2	100	85.533	ENSGALG00000010783	CPSF2	100	85.533	Gallus_gallus
ENSGAFG00000001407	cpsf2	100	94.663	ENSGACG00000008418	cpsf2	100	94.663	Gasterosteus_aculeatus
ENSGAFG00000001407	cpsf2	100	85.171	ENSGAGG00000008287	CPSF2	100	85.171	Gopherus_agassizii
ENSGAFG00000001407	cpsf2	100	85.425	ENSGGOG00000011799	CPSF2	100	85.425	Gorilla_gorilla
ENSGAFG00000001407	cpsf2	100	93.520	ENSHBUG00000023466	cpsf2	100	93.520	Haplochromis_burtoni
ENSGAFG00000001407	cpsf2	100	85.551	ENSHGLG00000018311	CPSF2	100	85.551	Heterocephalus_glaber_female
ENSGAFG00000001407	cpsf2	100	85.551	ENSHGLG00100016460	CPSF2	100	85.551	Heterocephalus_glaber_male
ENSGAFG00000001407	cpsf2	100	93.266	ENSHCOG00000019527	cpsf2	98	93.266	Hippocampus_comes
ENSGAFG00000001407	cpsf2	100	89.354	ENSIPUG00000020857	cpsf2	100	89.354	Ictalurus_punctatus
ENSGAFG00000001407	cpsf2	100	85.678	ENSSTOG00000009528	CPSF2	100	85.678	Ictidomys_tridecemlineatus
ENSGAFG00000001407	cpsf2	100	85.298	ENSJJAG00000017925	Cpsf2	100	85.298	Jaculus_jaculus
ENSGAFG00000001407	cpsf2	100	95.807	ENSKMAG00000019429	cpsf2	100	95.807	Kryptolebias_marmoratus
ENSGAFG00000001407	cpsf2	95	93.700	ENSLBEG00000011585	cpsf2	100	93.700	Labrus_bergylta
ENSGAFG00000001407	cpsf2	100	83.376	ENSLACG00000019024	CPSF2	100	83.650	Latimeria_chalumnae
ENSGAFG00000001407	cpsf2	100	88.608	ENSLOCG00000014102	cpsf2	100	88.608	Lepisosteus_oculatus
ENSGAFG00000001407	cpsf2	100	84.956	ENSLAFG00000004891	CPSF2	100	84.956	Loxodonta_africana
ENSGAFG00000001407	cpsf2	100	85.551	ENSMFAG00000041212	CPSF2	100	85.551	Macaca_fascicularis
ENSGAFG00000001407	cpsf2	100	85.551	ENSMMUG00000000699	CPSF2	100	85.551	Macaca_mulatta
ENSGAFG00000001407	cpsf2	100	85.551	ENSMNEG00000031584	CPSF2	100	85.551	Macaca_nemestrina
ENSGAFG00000001407	cpsf2	100	85.551	ENSMLEG00000029394	CPSF2	100	85.551	Mandrillus_leucophaeus
ENSGAFG00000001407	cpsf2	100	95.426	ENSMAMG00000004235	cpsf2	100	95.426	Mastacembelus_armatus
ENSGAFG00000001407	cpsf2	100	93.647	ENSMZEG00005001769	cpsf2	100	93.647	Maylandia_zebra
ENSGAFG00000001407	cpsf2	100	85.298	ENSMGAG00000013122	CPSF2	100	85.298	Meleagris_gallopavo
ENSGAFG00000001407	cpsf2	100	85.298	ENSMAUG00000015160	Cpsf2	100	85.298	Mesocricetus_auratus
ENSGAFG00000001407	cpsf2	100	85.551	ENSMICG00000016441	CPSF2	100	85.551	Microcebus_murinus
ENSGAFG00000001407	cpsf2	100	85.044	ENSMOCG00000015372	Cpsf2	100	85.044	Microtus_ochrogaster
ENSGAFG00000001407	cpsf2	100	88.691	ENSMMOG00000015590	cpsf2	100	88.691	Mola_mola
ENSGAFG00000001407	cpsf2	100	85.551	ENSMODG00000002042	CPSF2	100	85.551	Monodelphis_domestica
ENSGAFG00000001407	cpsf2	100	91.487	ENSMALG00000022275	cpsf2	100	91.487	Monopterus_albus
ENSGAFG00000001407	cpsf2	100	85.298	ENSMUSG00000041781	Cpsf2	100	85.298	Mus_musculus
ENSGAFG00000001407	cpsf2	100	85.425	MGP_PahariEiJ_G0029791	Cpsf2	100	85.425	Mus_pahari
ENSGAFG00000001407	cpsf2	100	85.298	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	Mus_spretus
ENSGAFG00000001407	cpsf2	100	85.551	ENSMPUG00000007617	CPSF2	98	85.551	Mustela_putorius_furo
ENSGAFG00000001407	cpsf2	100	85.044	ENSMLUG00000005570	CPSF2	100	85.044	Myotis_lucifugus
ENSGAFG00000001407	cpsf2	100	85.298	ENSNGAG00000020312	Cpsf2	100	85.298	Nannospalax_galili
ENSGAFG00000001407	cpsf2	100	94.028	ENSNBRG00000022402	cpsf2	100	94.028	Neolamprologus_brichardi
ENSGAFG00000001407	cpsf2	100	84.918	ENSNLEG00000017132	CPSF2	100	84.918	Nomascus_leucogenys
ENSGAFG00000001407	cpsf2	91	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSGAFG00000001407	cpsf2	94	81.030	ENSOPRG00000008484	-	100	81.030	Ochotona_princeps
ENSGAFG00000001407	cpsf2	100	85.298	ENSODEG00000008682	CPSF2	100	85.298	Octodon_degus
ENSGAFG00000001407	cpsf2	100	93.774	ENSONIG00000005901	cpsf2	100	93.774	Oreochromis_niloticus
ENSGAFG00000001407	cpsf2	100	85.171	ENSOANG00000003822	CPSF2	100	85.171	Ornithorhynchus_anatinus
ENSGAFG00000001407	cpsf2	100	85.298	ENSOCUG00000005713	CPSF2	100	85.298	Oryctolagus_cuniculus
ENSGAFG00000001407	cpsf2	100	88.564	ENSORLG00000011628	cpsf2	100	88.564	Oryzias_latipes
ENSGAFG00000001407	cpsf2	100	94.409	ENSORLG00020016980	cpsf2	100	94.409	Oryzias_latipes_hni
ENSGAFG00000001407	cpsf2	100	94.409	ENSORLG00015011910	cpsf2	100	94.409	Oryzias_latipes_hsok
ENSGAFG00000001407	cpsf2	100	94.670	ENSOMEG00000022876	cpsf2	100	94.670	Oryzias_melastigma
ENSGAFG00000001407	cpsf2	100	82.554	ENSOARG00000012889	CPSF2	100	82.554	Ovis_aries
ENSGAFG00000001407	cpsf2	100	85.425	ENSPPAG00000039666	CPSF2	100	85.425	Pan_paniscus
ENSGAFG00000001407	cpsf2	99	85.406	ENSPPRG00000010869	CPSF2	100	85.406	Panthera_pardus
ENSGAFG00000001407	cpsf2	100	85.425	ENSPTIG00000021202	CPSF2	100	85.425	Panthera_tigris_altaica
ENSGAFG00000001407	cpsf2	100	85.425	ENSPTRG00000006651	CPSF2	100	85.425	Pan_troglodytes
ENSGAFG00000001407	cpsf2	100	85.551	ENSPANG00000017417	CPSF2	100	85.551	Papio_anubis
ENSGAFG00000001407	cpsf2	100	85.171	ENSPKIG00000021453	cpsf2	100	85.171	Paramormyrops_kingsleyae
ENSGAFG00000001407	cpsf2	100	84.791	ENSPSIG00000006289	CPSF2	100	84.791	Pelodiscus_sinensis
ENSGAFG00000001407	cpsf2	76	87.188	ENSPMGG00000002511	cpsf2	99	88.333	Periophthalmus_magnuspinnatus
ENSGAFG00000001407	cpsf2	100	85.425	ENSPEMG00000007917	Cpsf2	100	85.425	Peromyscus_maniculatus_bairdii
ENSGAFG00000001407	cpsf2	100	72.522	ENSPMAG00000006205	cpsf2	100	72.784	Petromyzon_marinus
ENSGAFG00000001407	cpsf2	100	85.551	ENSPCIG00000011393	CPSF2	100	85.551	Phascolarctos_cinereus
ENSGAFG00000001407	cpsf2	100	99.238	ENSPFOG00000018648	cpsf2	100	99.238	Poecilia_formosa
ENSGAFG00000001407	cpsf2	100	99.238	ENSPLAG00000019199	cpsf2	99	99.238	Poecilia_latipinna
ENSGAFG00000001407	cpsf2	96	99.339	ENSPMEG00000012100	cpsf2	100	99.196	Poecilia_mexicana
ENSGAFG00000001407	cpsf2	100	98.729	ENSPREG00000008960	cpsf2	100	98.729	Poecilia_reticulata
ENSGAFG00000001407	cpsf2	64	81.511	ENSPPYG00000029685	-	100	81.511	Pongo_abelii
ENSGAFG00000001407	cpsf2	100	85.171	ENSPCAG00000012477	CPSF2	100	85.171	Procavia_capensis
ENSGAFG00000001407	cpsf2	100	85.678	ENSPCOG00000026387	CPSF2	100	85.678	Propithecus_coquereli
ENSGAFG00000001407	cpsf2	64	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSGAFG00000001407	cpsf2	100	93.274	ENSPNYG00000023356	cpsf2	100	93.274	Pundamilia_nyererei
ENSGAFG00000001407	cpsf2	100	90.241	ENSPNAG00000001849	cpsf2	100	90.241	Pygocentrus_nattereri
ENSGAFG00000001407	cpsf2	100	85.298	ENSRNOG00000005733	Cpsf2	100	85.298	Rattus_norvegicus
ENSGAFG00000001407	cpsf2	100	85.551	ENSRBIG00000044792	CPSF2	100	85.551	Rhinopithecus_bieti
ENSGAFG00000001407	cpsf2	100	85.551	ENSRROG00000034875	CPSF2	100	85.551	Rhinopithecus_roxellana
ENSGAFG00000001407	cpsf2	100	85.678	ENSSBOG00000024571	CPSF2	100	85.678	Saimiri_boliviensis_boliviensis
ENSGAFG00000001407	cpsf2	100	85.678	ENSSHAG00000010458	CPSF2	100	85.678	Sarcophilus_harrisii
ENSGAFG00000001407	cpsf2	100	90.368	ENSSFOG00015002117	cpsf2	100	90.494	Scleropages_formosus
ENSGAFG00000001407	cpsf2	100	93.528	ENSSMAG00000002001	cpsf2	100	94.416	Scophthalmus_maximus
ENSGAFG00000001407	cpsf2	100	95.553	ENSSDUG00000004084	cpsf2	100	95.553	Seriola_dumerili
ENSGAFG00000001407	cpsf2	100	95.426	ENSSLDG00000024330	cpsf2	100	95.426	Seriola_lalandi_dorsalis
ENSGAFG00000001407	cpsf2	58	93.069	ENSSARG00000009784	-	63	93.069	Sorex_araneus
ENSGAFG00000001407	cpsf2	100	85.171	ENSSPUG00000013485	CPSF2	100	85.171	Sphenodon_punctatus
ENSGAFG00000001407	cpsf2	100	95.044	ENSSPAG00000013284	cpsf2	100	95.044	Stegastes_partitus
ENSGAFG00000001407	cpsf2	100	85.298	ENSSSCG00000002447	CPSF2	100	85.298	Sus_scrofa
ENSGAFG00000001407	cpsf2	100	85.406	ENSTGUG00000012571	-	100	85.406	Taeniopygia_guttata
ENSGAFG00000001407	cpsf2	100	92.757	ENSTRUG00000003742	cpsf2	100	92.757	Takifugu_rubripes
ENSGAFG00000001407	cpsf2	100	91.508	ENSTNIG00000012228	cpsf2	100	92.522	Tetraodon_nigroviridis
ENSGAFG00000001407	cpsf2	91	83.333	ENSTBEG00000004530	CPSF2	94	83.333	Tupaia_belangeri
ENSGAFG00000001407	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSGAFG00000001407	cpsf2	100	85.551	ENSUAMG00000028071	CPSF2	100	85.551	Ursus_americanus
ENSGAFG00000001407	cpsf2	100	85.551	ENSUMAG00000005029	CPSF2	99	89.855	Ursus_maritimus
ENSGAFG00000001407	cpsf2	99	85.406	ENSVPAG00000003503	CPSF2	100	85.406	Vicugna_pacos
ENSGAFG00000001407	cpsf2	100	85.425	ENSVVUG00000024642	CPSF2	100	85.425	Vulpes_vulpes
ENSGAFG00000001407	cpsf2	100	84.030	ENSXETG00000010289	cpsf2	100	84.030	Xenopus_tropicalis
ENSGAFG00000001407	cpsf2	100	98.856	ENSXCOG00000001764	cpsf2	100	98.856	Xiphophorus_couchianus
ENSGAFG00000001407	cpsf2	100	99.492	ENSXMAG00000017048	cpsf2	100	99.492	Xiphophorus_maculatus